RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 CCT4P50991 539 aaKnown RBP17.6■□□□□ 0.41
SFSWAP-201ENST00000261674 TMEM63CQ9P1W3 806 aa17.6■□□□□ 0.41
SFSWAP-201ENST00000261674 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
SFSWAP-201ENST00000261674 ITSN1Q15811 1721 aa17.6■□□□□ 0.41
SFSWAP-201ENST00000261674 MX1P20591 662 aa17.6■□□□□ 0.41
SFSWAP-201ENST00000261674 FLIIQ13045 1269 aa17.6■□□□□ 0.41
SFSWAP-201ENST00000261674 PTMAP06454 111 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-201ENST00000261674 R3HCC1Q9Y3T6 440 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-201ENST00000261674 RBM10P98175 930 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-201ENST00000261674 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
SFSWAP-201ENST00000261674 KIF20BQ96Q89 1820 aa17.59■□□□□ 0.41
SFSWAP-201ENST00000261674 FMN2Q9NZ56 1722 aa17.59■□□□□ 0.41
SFSWAP-201ENST00000261674 UNC5CLQ8IV45 518 aa17.59■□□□□ 0.41
SFSWAP-201ENST00000261674 ESYT1Q9BSJ8 1104 aa17.58■□□□□ 0.41
SFSWAP-201ENST00000261674 CYP2E1P05181 493 aaPredicted RBP17.58■□□□□ 0.4
SFSWAP-201ENST00000261674 KCNH5Q8NCM2 988 aa17.58■□□□□ 0.4
SFSWAP-201ENST00000261674 FLT4P35916 1363 aa17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 ARHGEF25Q86VW2 580 aa17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 ZNF445P59923 1031 aa17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 GLIPR1L2Q4G1C9 344 aa17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 CLEC17AQ6ZS10 378 aa17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 PPP1R9BQ96SB3 815 aa17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 EVA1CP58658 441 aa17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 IP6K1Q92551 441 aa17.57■□□□□ 0.4
SFSWAP-201ENST00000261674 PLCB2Q00722 1185 aa17.56■□□□□ 0.4
SFSWAP-201ENST00000261674 SPATA31A3Q5VYP0 1347 aa17.56■□□□□ 0.4
SFSWAP-201ENST00000261674 RGS12O14924 1447 aa17.56■□□□□ 0.4
SFSWAP-201ENST00000261674 GNAI3P08754 354 aa17.55■□□□□ 0.4
SFSWAP-201ENST00000261674 KIF24Q5T7B8 1368 aa17.55■□□□□ 0.4
SFSWAP-201ENST00000261674 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-201ENST00000261674 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
SFSWAP-201ENST00000261674 MPRIPQ6WCQ1 1025 aa17.55■□□□□ 0.4
SFSWAP-201ENST00000261674 SBNO1A3KN83 1393 aa17.55■□□□□ 0.4
SFSWAP-201ENST00000261674 CHMLP26374 656 aa17.55■□□□□ 0.4
SFSWAP-201ENST00000261674 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
SFSWAP-201ENST00000261674 CCDC9Q9Y3X0 531 aaKnown RBP17.54■□□□□ 0.4
SFSWAP-201ENST00000261674 DLG5Q8TDM6 1919 aa17.54■□□□□ 0.4
SFSWAP-201ENST00000261674 USP31Q70CQ4 1352 aa17.54■□□□□ 0.4
SFSWAP-201ENST00000261674 ANXA1P04083 346 aa17.54■□□□□ 0.4
SFSWAP-201ENST00000261674 PHAXQ9H814 394 aaKnown RBP17.54■□□□□ 0.4
SFSWAP-201ENST00000261674 PIK3C2AO00443 1686 aa17.54■□□□□ 0.4
SFSWAP-201ENST00000261674 OS9Q13438 667 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-201ENST00000261674 DDX54Q8TDD1 881 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-201ENST00000261674 FAM13BQ9NYF5 915 aa17.53■□□□□ 0.4
SFSWAP-201ENST00000261674 MON2Q7Z3U7 1717 aa17.52■□□□□ 0.4
SFSWAP-201ENST00000261674 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.4
SFSWAP-201ENST00000261674 GADD45BO75293 160 aaPredicted RBP17.52■□□□□ 0.39
SFSWAP-201ENST00000261674 ATP8B2P98198 1209 aa17.52■□□□□ 0.39
SFSWAP-201ENST00000261674 LRSAM1Q6UWE0 723 aa17.52■□□□□ 0.39
SFSWAP-201ENST00000261674 IL25Q9H293 177 aa17.52■□□□□ 0.39
SFSWAP-201ENST00000261674 TOPAZ1Q8N9V7 1692 aa17.51■□□□□ 0.39
SFSWAP-201ENST00000261674 LGR6Q9HBX8 967 aa17.51■□□□□ 0.39
SFSWAP-201ENST00000261674 AKAP12Q02952 1782 aa17.51■□□□□ 0.39
SFSWAP-201ENST00000261674 GNAT3A8MTJ3 354 aa17.51■□□□□ 0.39
SFSWAP-201ENST00000261674 BTG4Q9NY30 223 aa17.51■□□□□ 0.39
SFSWAP-201ENST00000261674 NWD1Q149M9 1564 aa17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 RRP9O43818 475 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 CPA1P15085 419 aa17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 TOM1O60784 492 aa17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 DNTTIP2Q5QJE6 756 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 LARP1Q6PKG0 1096 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 CWC27Q6UX04 472 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 PPP1R42Q7Z4L9 355 aa17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 OSBPL3Q9H4L5 887 aa17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 SPG7Q9UQ90 795 aa17.5■□□□□ 0.39
SFSWAP-201ENST00000261674 USP44Q9H0E7 712 aa17.49■□□□□ 0.39
SFSWAP-201ENST00000261674 ZNF530Q6P9A1 599 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-201ENST00000261674 MBD3O95983 291 aa17.49■□□□□ 0.39
SFSWAP-201ENST00000261674 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-201ENST00000261674 CRB1P82279 1406 aa17.49■□□□□ 0.39
SFSWAP-201ENST00000261674 MCM2P49736 904 aa17.48■□□□□ 0.39
SFSWAP-201ENST00000261674 OFD1O75665 1012 aa17.48■□□□□ 0.39
SFSWAP-201ENST00000261674 BRD1O95696 1058 aa17.48■□□□□ 0.39
SFSWAP-201ENST00000261674 IL17REQ8NFR9 667 aa17.48■□□□□ 0.39
SFSWAP-201ENST00000261674 PEAK1Q9H792 1746 aa17.48■□□□□ 0.39
SFSWAP-201ENST00000261674 USP48Q86UV5 1035 aa17.47■□□□□ 0.39
SFSWAP-201ENST00000261674 IBTKQ9P2D0 1353 aaPredicted RBP17.47■□□□□ 0.39
SFSWAP-201ENST00000261674 ZNF830Q96NB3 372 aaPredicted RBP17.47■□□□□ 0.39
SFSWAP-201ENST00000261674 TSPY26PQ9H489 355 aa17.47■□□□□ 0.39
SFSWAP-201ENST00000261674 TPM2P07951 284 aa17.47■□□□□ 0.39
SFSWAP-201ENST00000261674 CHMP3Q9Y3E7 222 aa17.47■□□□□ 0.39
SFSWAP-201ENST00000261674 FIBPO43427 364 aa17.46■□□□□ 0.39
SFSWAP-201ENST00000261674 RAPGEF4Q8WZA2 1011 aa17.46■□□□□ 0.39
SFSWAP-201ENST00000261674 TAF7Q15545 349 aaPredicted RBP17.46■□□□□ 0.39
SFSWAP-201ENST00000261674 SOS2Q07890 1332 aaPredicted RBP17.46■□□□□ 0.39
SFSWAP-201ENST00000261674 NBPF7P0C2Y1 421 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-201ENST00000261674 NOL7Q9UMY1 257 aaKnown RBP17.45■□□□□ 0.38
SFSWAP-201ENST00000261674 TNS3Q68CZ2 1445 aa17.45■□□□□ 0.38
SFSWAP-201ENST00000261674 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-201ENST00000261674 SRCIN1Q9C0H9 1055 aa17.45■□□□□ 0.38
SFSWAP-201ENST00000261674 C8orf37Q96NL8 207 aa17.45■□□□□ 0.38
SFSWAP-201ENST00000261674 CNPY2Q9Y2B0 182 aa17.45■□□□□ 0.38
SFSWAP-201ENST00000261674 ERBB3P21860 1342 aa17.45■□□□□ 0.38
SFSWAP-201ENST00000261674 IGSF1Q8N6C5 1336 aa17.45■□□□□ 0.38
SFSWAP-201ENST00000261674 NRKQ7Z2Y5 1582 aa17.44■□□□□ 0.38
SFSWAP-201ENST00000261674 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms