RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ANKRD44Q8N8A2 993 aa34.69■■■■□ 3.14
CCM2-201ENST00000258781 MEIS3Q99687 375 aa34.68■■■■□ 3.14
CCM2-201ENST00000258781 FAM98CQ17RN3 349 aaKnown RBP34.67■■■■□ 3.14
CCM2-201ENST00000258781 CHD1LQ86WJ1 897 aa34.67■■■■□ 3.14
CCM2-201ENST00000258781 GLI3P10071 1580 aa34.66■■■■□ 3.14
CCM2-201ENST00000258781 CABP4P57796 275 aa34.66■■■■□ 3.14
CCM2-201ENST00000258781 SLC39A6Q13433 755 aa34.66■■■■□ 3.14
CCM2-201ENST00000258781 DDB1Q16531 1140 aa34.66■■■■□ 3.14
CCM2-201ENST00000258781 IPO9Q96P70 1041 aaKnown RBP34.66■■■■□ 3.14
CCM2-201ENST00000258781 EIF2S2P20042 333 aaKnown RBP34.65■■■■□ 3.14
CCM2-201ENST00000258781 ITGB4P16144 1822 aa34.65■■■■□ 3.14
CCM2-201ENST00000258781 GIGYF1O75420 1035 aaPredicted RBP34.65■■■■□ 3.14
CCM2-201ENST00000258781 ERVV-2B6SEH9 535 aa34.64■■■■□ 3.14
CCM2-201ENST00000258781 NPM2Q86SE8 214 aaKnown RBP34.64■■■■□ 3.14
CCM2-201ENST00000258781 CEP85Q6P2H3 762 aa34.63■■■■□ 3.13
CCM2-201ENST00000258781 ZNF790Q6PG37 636 aa34.63■■■■□ 3.13
CCM2-201ENST00000258781 CHPF2Q9P2E5 772 aa34.63■■■■□ 3.13
CCM2-201ENST00000258781 KAT6BQ8WYB5 2073 aa34.62■■■■□ 3.13
CCM2-201ENST00000258781 PAPPAQ13219 1627 aa34.62■■■■□ 3.13
CCM2-201ENST00000258781 DCTPP1Q9H773 170 aa34.61■■■■□ 3.13
CCM2-201ENST00000258781 THSD7AQ9UPZ6 1657 aa34.61■■■■□ 3.13
CCM2-201ENST00000258781 ATRNO75882 1429 aa34.61■■■■□ 3.13
CCM2-201ENST00000258781 PHAXQ9H814 394 aaKnown RBP34.61■■■■□ 3.13
CCM2-201ENST00000258781 DBF4Q9UBU7 674 aaPredicted RBP34.61■■■■□ 3.13
CCM2-201ENST00000258781 DOT1LQ8TEK3 1739 aa34.6■■■■□ 3.13
CCM2-201ENST00000258781 GNAI3P08754 354 aa34.59■■■■□ 3.13
CCM2-201ENST00000258781 LNPKQ9C0E8 428 aa34.59■■■■□ 3.13
CCM2-201ENST00000258781 C5P01031 1676 aa34.59■■■■□ 3.13
CCM2-201ENST00000258781 ANKRD45Q5TZF3 282 aa34.58■■■■□ 3.13
CCM2-201ENST00000258781 UBR2Q8IWV8 1755 aa34.58■■■■□ 3.13
CCM2-201ENST00000258781 MARCH10Q8NA82 808 aaPredicted RBP34.57■■■■□ 3.12
CCM2-201ENST00000258781 GJD4Q96KN9 370 aaPredicted RBP34.57■■■■□ 3.12
CCM2-201ENST00000258781 GNAI2P04899 355 aa34.56■■■■□ 3.12
CCM2-201ENST00000258781 PRAMEF22A3QJZ6 481 aa34.55■■■■□ 3.12
CCM2-201ENST00000258781 HMMRO75330 724 aa34.54■■■■□ 3.12
CCM2-201ENST00000258781 ZNF496Q96IT1 587 aaPredicted RBP34.54■■■■□ 3.12
CCM2-201ENST00000258781 TRPC5Q9UL62 973 aaPredicted RBP34.54■■■■□ 3.12
CCM2-201ENST00000258781 TTC5Q8N0Z6 440 aa34.52■■■■□ 3.12
CCM2-201ENST00000258781 FBXO41Q8TF61 875 aa34.52■■■■□ 3.12
CCM2-201ENST00000258781 TMOD3Q9NYL9 352 aa34.52■■■■□ 3.12
CCM2-201ENST00000258781 KCPQ6ZWJ8 1503 aa34.5■■■■□ 3.11
CCM2-201ENST00000258781 DNAAF4Q8WXU2 420 aa34.5■■■■□ 3.11
CCM2-201ENST00000258781 HYPKQ9NX55 129 aa34.5■■■■□ 3.11
CCM2-201ENST00000258781 A0A0G2JS52 829 aa34.5■■■■□ 3.11
CCM2-201ENST00000258781 MYT1Q01538 1121 aa34.5■■■■□ 3.11
CCM2-201ENST00000258781 PIGBQ92521 554 aa34.5■■■■□ 3.11
CCM2-201ENST00000258781 SRCIN1Q9C0H9 1055 aa34.5■■■■□ 3.11
CCM2-201ENST00000258781 DDRGK1Q96HY6 314 aa34.49■■■■□ 3.11
CCM2-201ENST00000258781 BCL9O00512 1426 aa34.48■■■■□ 3.11
CCM2-201ENST00000258781 ADCY9O60503 1353 aa34.48■■■■□ 3.11
CCM2-201ENST00000258781 QTRT2Q9H974 415 aaKnown RBP34.48■■■■□ 3.11
CCM2-201ENST00000258781 DDX21Q9NR30 783 aaKnown RBP eCLIP34.48■■■■□ 3.11
CCM2-201ENST00000258781 NOP58Q9Y2X3 529 aaKnown RBP34.48■■■■□ 3.11
CCM2-201ENST00000258781 LAMB4A4D0S4 1761 aa34.47■■■■□ 3.11
CCM2-201ENST00000258781 USP44Q9H0E7 712 aa34.47■■■■□ 3.11
CCM2-201ENST00000258781 PI4KAP2A4QPH2 592 aa34.46■■■■□ 3.11
CCM2-201ENST00000258781 PI4KAP1Q8N8J0 262 aa34.46■■■■□ 3.11
CCM2-201ENST00000258781 ANXA1P04083 346 aa34.46■■■■□ 3.11
CCM2-201ENST00000258781 FMNL2Q96PY5 1086 aa34.46■■■■□ 3.11
CCM2-201ENST00000258781 BEND3Q5T5X7 828 aa34.45■■■■□ 3.11
CCM2-201ENST00000258781 PROSER3Q2NL68 480 aa34.44■■■■□ 3.1
CCM2-201ENST00000258781 BMP2KLQ5H9B9 411 aa34.44■■■■□ 3.1
CCM2-201ENST00000258781 ZBTB47Q9UFB7 747 aaPredicted RBP34.44■■■■□ 3.1
CCM2-201ENST00000258781 UBTFL1P0CB47 393 aaPredicted RBP34.44■■■■□ 3.1
CCM2-201ENST00000258781 PRIM1P49642 420 aaKnown RBP34.44■■■■□ 3.1
CCM2-201ENST00000258781 SYTL4Q96C24 671 aaPredicted RBP34.44■■■■□ 3.1
CCM2-201ENST00000258781 SEC24BO95487 1268 aa34.43■■■■□ 3.1
CCM2-201ENST00000258781 ASAP1Q9ULH1 1129 aa34.43■■■■□ 3.1
CCM2-201ENST00000258781 ONECUT3O60422 494 aaPredicted RBP34.42■■■■□ 3.1
CCM2-201ENST00000258781 SNRPA1P09661 255 aaKnown RBP34.42■■■■□ 3.1
CCM2-201ENST00000258781 ERICH6Q7L0X2 663 aa34.42■■■■□ 3.1
CCM2-201ENST00000258781 ACSBG1Q96GR2 724 aa34.42■■■■□ 3.1
CCM2-201ENST00000258781 ATP8B2P98198 1209 aa34.41■■■■□ 3.1
CCM2-201ENST00000258781 KSR2Q6VAB6 950 aa34.41■■■■□ 3.1
CCM2-201ENST00000258781 PDIA6Q15084 440 aa34.41■■■■□ 3.1
CCM2-201ENST00000258781 ATG3Q9NT62 314 aa34.4■■■■□ 3.1
CCM2-201ENST00000258781 UPF2Q9HAU5 1272 aaKnown RBP34.39■■■■□ 3.1
CCM2-201ENST00000258781 LRRFIP2Q9Y608 721 aaKnown RBP34.39■■■■□ 3.1
CCM2-201ENST00000258781 PTCD1O75127 700 aaKnown RBP34.39■■■■□ 3.1
CCM2-201ENST00000258781 DDX58O95786 925 aaKnown RBP34.39■■■■□ 3.1
CCM2-201ENST00000258781 ALDH1L1O75891 902 aa34.38■■■■□ 3.09
CCM2-201ENST00000258781 USP16Q9Y5T5 823 aa34.38■■■■□ 3.09
CCM2-201ENST00000258781 MAP3K2Q9Y2U5 619 aa34.37■■■■□ 3.09
CCM2-201ENST00000258781 EP400Q96L91 3159 aa34.37■■■■□ 3.09
CCM2-201ENST00000258781 SEPT12Q8IYM1 358 aa34.36■■■■□ 3.09
CCM2-201ENST00000258781 PLEKHM2Q8IWE5 1019 aa34.35■■■■□ 3.09
CCM2-201ENST00000258781 FAM182BQ5T319 152 aa34.34■■■■□ 3.09
CCM2-201ENST00000258781 IBTKQ9P2D0 1353 aaPredicted RBP34.34■■■■□ 3.09
CCM2-201ENST00000258781 BRWD3Q6RI45 1802 aa34.33■■■■□ 3.09
CCM2-201ENST00000258781 KCNQ2O43526 872 aa34.33■■■■□ 3.09
CCM2-201ENST00000258781 PNMA6EA0A0J9YXQ4 647 aa34.32■■■■□ 3.08
CCM2-201ENST00000258781 ZNF772Q68DY9 489 aaPredicted RBP34.32■■■■□ 3.08
CCM2-201ENST00000258781 SSH3Q8TE77 659 aa34.3■■■■□ 3.08
CCM2-201ENST00000258781 TBC1D32Q96NH3 1257 aa34.3■■■■□ 3.08
CCM2-201ENST00000258781 LINS1Q8NG48 757 aa34.29■■■■□ 3.08
CCM2-201ENST00000258781 ERBB4Q15303 1308 aa34.29■■■■□ 3.08
CCM2-201ENST00000258781 SBF2Q86WG5 1849 aa34.29■■■■□ 3.08
CCM2-201ENST00000258781 HDAC5Q9UQL6 1122 aa34.29■■■■□ 3.08
CCM2-201ENST00000258781 NBPF7P0C2Y1 421 aaPredicted RBP34.28■■■■□ 3.08
CCM2-201ENST00000258781 PIP4K2AP48426 406 aaPredicted RBP34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms