RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PDE1AP54750 535 aa17.97■□□□□ 0.47
TRAFD1-201ENST00000257604 ATP10DQ9P241 1426 aa17.97■□□□□ 0.47
TRAFD1-201ENST00000257604 GOLGA6L3A6NEY3 463 aa17.97■□□□□ 0.47
TRAFD1-201ENST00000257604 L1TD1Q5T7N2 865 aaKnown RBP17.97■□□□□ 0.47
TRAFD1-201ENST00000257604 BRINP3Q76B58 766 aa17.97■□□□□ 0.47
TRAFD1-201ENST00000257604 SYTL4Q96C24 671 aaPredicted RBP17.96■□□□□ 0.47
TRAFD1-201ENST00000257604 ANO2Q9NQ90 1003 aa17.96■□□□□ 0.47
TRAFD1-201ENST00000257604 SLAIN2Q9P270 581 aa17.96■□□□□ 0.47
TRAFD1-201ENST00000257604 SPG7Q9UQ90 795 aa17.96■□□□□ 0.47
TRAFD1-201ENST00000257604 ATP8B2P98198 1209 aa17.96■□□□□ 0.47
TRAFD1-201ENST00000257604 ZNF790Q6PG37 636 aa17.96■□□□□ 0.47
TRAFD1-201ENST00000257604 MCM4P33991 863 aa17.95■□□□□ 0.46
TRAFD1-201ENST00000257604 COPS6Q7L5N1 327 aa17.95■□□□□ 0.46
TRAFD1-201ENST00000257604 VSIG10Q8N0Z9 540 aa17.95■□□□□ 0.46
TRAFD1-201ENST00000257604 DTNBO60941 627 aa17.95■□□□□ 0.46
TRAFD1-201ENST00000257604 MX1P20591 662 aa17.95■□□□□ 0.46
TRAFD1-201ENST00000257604 XAGE3Q8WTP9 111 aa17.95■□□□□ 0.46
TRAFD1-201ENST00000257604 UNC5CLQ8IV45 518 aa17.94■□□□□ 0.46
TRAFD1-201ENST00000257604 MYD88Q99836 296 aa17.94■□□□□ 0.46
TRAFD1-201ENST00000257604 CYP27B1O15528 508 aa17.94■□□□□ 0.46
TRAFD1-201ENST00000257604 IFNL2Q8IZJ0 200 aa17.93■□□□□ 0.46
TRAFD1-201ENST00000257604 SOS1Q07889 1333 aaPredicted RBP17.93■□□□□ 0.46
TRAFD1-201ENST00000257604 LTN1O94822 1766 aa17.93■□□□□ 0.46
TRAFD1-201ENST00000257604 PHKG2P15735 406 aa17.93■□□□□ 0.46
TRAFD1-201ENST00000257604 RGPD2P0DJD1 1756 aa17.92■□□□□ 0.46
TRAFD1-201ENST00000257604 BEND3Q5T5X7 828 aa17.92■□□□□ 0.46
TRAFD1-201ENST00000257604 KIF24Q5T7B8 1368 aa17.92■□□□□ 0.46
TRAFD1-201ENST00000257604 NWD1Q149M9 1564 aa17.92■□□□□ 0.46
TRAFD1-201ENST00000257604 ADAMTSL3P82987 1691 aa17.92■□□□□ 0.46
TRAFD1-201ENST00000257604 TRAK2O60296 914 aa17.92■□□□□ 0.46
TRAFD1-201ENST00000257604 LARP6Q9BRS8 491 aaKnown RBP17.92■□□□□ 0.46
TRAFD1-201ENST00000257604 FOXD4L6Q3SYB3 417 aaPredicted RBP17.91■□□□□ 0.46
TRAFD1-201ENST00000257604 FOXD4L3Q6VB84 417 aaPredicted RBP17.91■□□□□ 0.46
TRAFD1-201ENST00000257604 CCDC85AQ96PX6 553 aaPredicted RBP17.91■□□□□ 0.46
TRAFD1-201ENST00000257604 SLC52A2Q9HAB3 445 aa17.91■□□□□ 0.46
TRAFD1-201ENST00000257604 CEMIPQ8WUJ3 1361 aa17.9■□□□□ 0.46
TRAFD1-201ENST00000257604 KDM4FA0A1W2PPD8 638 aa17.9■□□□□ 0.46
TRAFD1-201ENST00000257604 LARP1Q6PKG0 1096 aaKnown RBP17.9■□□□□ 0.46
TRAFD1-201ENST00000257604 RGPD1P0DJD0 1748 aa17.9■□□□□ 0.46
TRAFD1-201ENST00000257604 CCDC8Q9H0W5 538 aaPredicted RBP17.9■□□□□ 0.46
TRAFD1-201ENST00000257604 RHPN1Q8TCX5 695 aa17.89■□□□□ 0.46
TRAFD1-201ENST00000257604 A0A0U1RQG5 324 aaPredicted RBP17.89■□□□□ 0.45
TRAFD1-201ENST00000257604 NFAT5O94916 1531 aa17.89■□□□□ 0.45
TRAFD1-201ENST00000257604 KSR2Q6VAB6 950 aa17.89■□□□□ 0.45
TRAFD1-201ENST00000257604 UPF3BQ9BZI7 483 aaKnown RBP17.89■□□□□ 0.45
TRAFD1-201ENST00000257604 MST1RQ04912 1400 aa17.88■□□□□ 0.45
TRAFD1-201ENST00000257604 DDX58O95786 925 aaKnown RBP17.88■□□□□ 0.45
TRAFD1-201ENST00000257604 NEXNQ0ZGT2 675 aa17.88■□□□□ 0.45
TRAFD1-201ENST00000257604 ZBTB3Q9H5J0 574 aa17.88■□□□□ 0.45
TRAFD1-201ENST00000257604 SPATA31A3Q5VYP0 1347 aa17.88■□□□□ 0.45
TRAFD1-201ENST00000257604 ADAMTS2O95450 1211 aa17.88■□□□□ 0.45
TRAFD1-201ENST00000257604 KIF2CQ99661 725 aa17.87■□□□□ 0.45
TRAFD1-201ENST00000257604 A1BGP04217 495 aa17.87■□□□□ 0.45
TRAFD1-201ENST00000257604 CWC27Q6UX04 472 aaKnown RBP17.87■□□□□ 0.45
TRAFD1-201ENST00000257604 UBE3BQ7Z3V4 1068 aa17.87■□□□□ 0.45
TRAFD1-201ENST00000257604 BICC1Q9H694 974 aaKnown RBP17.87■□□□□ 0.45
TRAFD1-201ENST00000257604 ADCY9O60503 1353 aa17.87■□□□□ 0.45
TRAFD1-201ENST00000257604 SUCLG2Q96I99 432 aa17.87■□□□□ 0.45
TRAFD1-201ENST00000257604 ARID3AQ99856 593 aa17.87■□□□□ 0.45
TRAFD1-201ENST00000257604 CHMP5Q9NZZ3 219 aa17.87■□□□□ 0.45
TRAFD1-201ENST00000257604 NDUFB9Q9Y6M9 179 aa17.87■□□□□ 0.45
TRAFD1-201ENST00000257604 RBM25P49756 843 aaKnown RBP17.86■□□□□ 0.45
TRAFD1-201ENST00000257604 NEK4P51957 841 aa17.86■□□□□ 0.45
TRAFD1-201ENST00000257604 NUTM2BA6NNL0 878 aaPredicted RBP17.86■□□□□ 0.45
TRAFD1-201ENST00000257604 NUTM2EB1AL46 878 aaPredicted RBP17.86■□□□□ 0.45
TRAFD1-201ENST00000257604 ERC2O15083 957 aa17.86■□□□□ 0.45
TRAFD1-201ENST00000257604 NUTM2AQ8IVF1 878 aaPredicted RBP17.86■□□□□ 0.45
TRAFD1-201ENST00000257604 ZCRB1Q8TBF4 217 aaKnown RBP17.86■□□□□ 0.45
TRAFD1-201ENST00000257604 USP26Q9BXU7 913 aa17.86■□□□□ 0.45
TRAFD1-201ENST00000257604 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
TRAFD1-201ENST00000257604 AACSQ86V21 672 aa17.85■□□□□ 0.45
TRAFD1-201ENST00000257604 HYPKQ9NX55 129 aa17.85■□□□□ 0.45
TRAFD1-201ENST00000257604 DDX21Q9NR30 783 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRAFD1-201ENST00000257604 ANKRD13DQ6ZTN6 518 aa17.84■□□□□ 0.45
TRAFD1-201ENST00000257604 BTG4Q9NY30 223 aa17.84■□□□□ 0.45
TRAFD1-201ENST00000257604 FSD2A1L4K1 749 aa17.84■□□□□ 0.45
TRAFD1-201ENST00000257604 GRM8O00222 908 aa17.84■□□□□ 0.45
TRAFD1-201ENST00000257604 REC8O95072 547 aa17.84■□□□□ 0.45
TRAFD1-201ENST00000257604 PIP4K2BP78356 416 aa17.84■□□□□ 0.45
TRAFD1-201ENST00000257604 CLASRPQ8N2M8 674 aaKnown RBP17.84■□□□□ 0.45
TRAFD1-201ENST00000257604 VIRMAQ69YN4 1812 aaKnown RBP17.83■□□□□ 0.45
TRAFD1-201ENST00000257604 MEGF6O75095 1541 aa17.83■□□□□ 0.45
TRAFD1-201ENST00000257604 K7ELQ4 463 aaPredicted RBP17.83■□□□□ 0.45
TRAFD1-201ENST00000257604 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.45
TRAFD1-201ENST00000257604 CHAMP1Q96JM3 812 aa17.83■□□□□ 0.45
TRAFD1-201ENST00000257604 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.45
TRAFD1-201ENST00000257604 SNRPA1P09661 255 aaKnown RBP17.83■□□□□ 0.44
TRAFD1-201ENST00000257604 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.44
TRAFD1-201ENST00000257604 DCAF5Q96JK2 942 aa17.83■□□□□ 0.44
TRAFD1-201ENST00000257604 FMNL2Q96PY5 1086 aa17.83■□□□□ 0.44
TRAFD1-201ENST00000257604 IL25Q9H293 177 aa17.83■□□□□ 0.44
TRAFD1-201ENST00000257604 SSH3Q8TE77 659 aa17.83■□□□□ 0.44
TRAFD1-201ENST00000257604 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
TRAFD1-201ENST00000257604 KIF1BPQ96EK5 621 aa17.82■□□□□ 0.44
TRAFD1-201ENST00000257604 PALD1Q9ULE6 856 aa17.82■□□□□ 0.44
TRAFD1-201ENST00000257604 A0A087WZG4 1122 aa17.82■□□□□ 0.44
TRAFD1-201ENST00000257604 BOLA2Q9H3K6 86 aa17.82■□□□□ 0.44
TRAFD1-201ENST00000257604 IBTKQ9P2D0 1353 aaPredicted RBP17.81■□□□□ 0.44
TRAFD1-201ENST00000257604 IGKV5-2P06315 115 aa17.81■□□□□ 0.44
TRAFD1-201ENST00000257604 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms