RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.75□□□□□ -0.37
DCLK1-201ENST00000255448 SLFN5Q08AF3 891 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 NOL7Q9UMY1 257 aaKnown RBP12.75□□□□□ -0.37
DCLK1-201ENST00000255448 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 POTEB2H3BUK9 544 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 SLU7O95391 586 aaKnown RBP12.74□□□□□ -0.37
DCLK1-201ENST00000255448 GSDMDP57764 484 aa12.74□□□□□ -0.37
DCLK1-201ENST00000255448 ANKRD1Q15327 319 aa12.74□□□□□ -0.37
DCLK1-201ENST00000255448 GBP6Q6ZN66 633 aa12.74□□□□□ -0.37
DCLK1-201ENST00000255448 KIAA1328Q86T90 577 aa12.74□□□□□ -0.37
DCLK1-201ENST00000255448 TOP1P11387 765 aaKnown RBP12.74□□□□□ -0.37
DCLK1-201ENST00000255448 SSR1P43307 286 aaKnown RBP12.74□□□□□ -0.37
DCLK1-201ENST00000255448 PIP4K2BP78356 416 aa12.74□□□□□ -0.37
DCLK1-201ENST00000255448 RRS1Q15050 365 aaKnown RBP12.74□□□□□ -0.37
DCLK1-201ENST00000255448 SARNPP82979 210 aaKnown RBP12.74□□□□□ -0.37
DCLK1-201ENST00000255448 CLGNO14967 610 aa12.74□□□□□ -0.37
DCLK1-201ENST00000255448 MAP4K4O95819 1239 aaPredicted RBP12.74□□□□□ -0.37
DCLK1-201ENST00000255448 TERF1P54274 439 aa12.74□□□□□ -0.37
DCLK1-201ENST00000255448 GABPB1Q06547 395 aaPredicted RBP12.74□□□□□ -0.37
DCLK1-201ENST00000255448 LUZP1Q86V48 1076 aa12.74□□□□□ -0.37
DCLK1-201ENST00000255448 ZBTB9Q96C00 473 aa12.74□□□□□ -0.37
DCLK1-201ENST00000255448 ZSCAN31Q96LW9 406 aaPredicted RBP12.74□□□□□ -0.37
DCLK1-201ENST00000255448 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 C8orf34Q49A92 452 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 JAKMIP1Q96N16 626 aaKnown RBP12.73□□□□□ -0.37
DCLK1-201ENST00000255448 ANKRD62A6NC57 917 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 ATP2C2O75185 946 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 TMC6Q7Z403 805 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 FANCAO15360 1455 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 ZNF165P49910 485 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 SEPT7Q16181 437 aaKnown RBP12.73□□□□□ -0.37
DCLK1-201ENST00000255448 CCDC57Q2TAC2 916 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 ZFYVE27Q5T4F4 411 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 ZSCAN25Q6NSZ9 544 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 NACAP1Q9BZK3 213 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 GNAT3A8MTJ3 354 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 CERS3Q8IU89 383 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 CCDC83Q8IWF9 413 aa12.73□□□□□ -0.37
DCLK1-201ENST00000255448 MPHOSPH8Q99549 860 aa12.72□□□□□ -0.37
DCLK1-201ENST00000255448 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
DCLK1-201ENST00000255448 LIG1P18858 919 aa12.72□□□□□ -0.37
DCLK1-201ENST00000255448 GNG11P61952 73 aa12.72□□□□□ -0.37
DCLK1-201ENST00000255448 SKILP12757 684 aa12.72□□□□□ -0.37
DCLK1-201ENST00000255448 EZRP15311 586 aaKnown RBP12.72□□□□□ -0.37
DCLK1-201ENST00000255448 IKQ13123 557 aaPredicted RBP12.72□□□□□ -0.37
DCLK1-201ENST00000255448 BANK1Q8NDB2 785 aa12.72□□□□□ -0.37
DCLK1-201ENST00000255448 IGHDP01880 384 aa12.72□□□□□ -0.37
DCLK1-201ENST00000255448 MYRIPQ8NFW9 859 aa12.72□□□□□ -0.37
DCLK1-201ENST00000255448 SCAND2PQ9GZW5 306 aaPredicted RBP12.72□□□□□ -0.37
DCLK1-201ENST00000255448 BCCIPQ9P287 314 aaKnown RBP eCLIP12.72□□□□□ -0.37
DCLK1-201ENST00000255448 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
DCLK1-201ENST00000255448 ABCC11Q96J66 1382 aa12.71□□□□□ -0.37
DCLK1-201ENST00000255448 ZC3H6P61129 1189 aaKnown RBP12.71□□□□□ -0.37
DCLK1-201ENST00000255448 LUC7LQ9NQ29 371 aaKnown RBP12.71□□□□□ -0.37
DCLK1-201ENST00000255448 VPS18Q9P253 973 aa12.71□□□□□ -0.37
DCLK1-201ENST00000255448 DNAI1Q9UI46 699 aa12.71□□□□□ -0.37
DCLK1-201ENST00000255448 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.38
DCLK1-201ENST00000255448 CCDC113Q9H0I3 377 aa12.71□□□□□ -0.38
DCLK1-201ENST00000255448 PHF8Q9UPP1 1060 aa12.71□□□□□ -0.38
DCLK1-201ENST00000255448 AMOTL2Q9Y2J4 779 aa12.71□□□□□ -0.38
DCLK1-201ENST00000255448 STARD3NLO95772 234 aa12.71□□□□□ -0.38
DCLK1-201ENST00000255448 HSPA4P34932 840 aa12.71□□□□□ -0.38
DCLK1-201ENST00000255448 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.38
DCLK1-201ENST00000255448 BLOC1S2Q6QNY1 142 aa12.71□□□□□ -0.38
DCLK1-201ENST00000255448 LRPPRCP42704 1394 aaKnown RBP12.7□□□□□ -0.38
DCLK1-201ENST00000255448 AMOTQ4VCS5 1084 aa12.7□□□□□ -0.38
DCLK1-201ENST00000255448 RPAP2Q8IXW5 612 aaPredicted RBP12.7□□□□□ -0.38
DCLK1-201ENST00000255448 NCOA1Q15788 1441 aa12.7□□□□□ -0.38
DCLK1-201ENST00000255448 EBAG9O00559 213 aa12.7□□□□□ -0.38
DCLK1-201ENST00000255448 CCDC175P0C221 793 aa12.7□□□□□ -0.38
DCLK1-201ENST00000255448 MYL6BP14649 208 aa12.7□□□□□ -0.38
DCLK1-201ENST00000255448 IDI1Q13907 227 aa12.7□□□□□ -0.38
DCLK1-201ENST00000255448 DHX29Q7Z478 1369 aaKnown RBP12.7□□□□□ -0.38
DCLK1-201ENST00000255448 TMEM57Q8N5G2 664 aa12.7□□□□□ -0.38
DCLK1-201ENST00000255448 CASTP20810 708 aaKnown RBP12.7□□□□□ -0.38
DCLK1-201ENST00000255448 CEP126Q9P2H0 1117 aa12.7□□□□□ -0.38
DCLK1-201ENST00000255448 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
DCLK1-201ENST00000255448 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
DCLK1-201ENST00000255448 NAA25Q14CX7 972 aa12.69□□□□□ -0.38
DCLK1-201ENST00000255448 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
DCLK1-201ENST00000255448 TSC1Q92574 1164 aa12.69□□□□□ -0.38
DCLK1-201ENST00000255448 CPSF2Q9P2I0 782 aaKnown RBP12.69□□□□□ -0.38
DCLK1-201ENST00000255448 PHACTR2O75167 634 aa12.69□□□□□ -0.38
DCLK1-201ENST00000255448 UBE2HP62256 183 aa12.69□□□□□ -0.38
DCLK1-201ENST00000255448 DMTNQ08495 405 aa12.69□□□□□ -0.38
DCLK1-201ENST00000255448 DDX19AQ9NUU7 478 aaKnown RBP12.69□□□□□ -0.38
DCLK1-201ENST00000255448 TEX14Q8IWB6 1497 aa12.68□□□□□ -0.38
DCLK1-201ENST00000255448 SRGAP3O43295 1099 aa12.68□□□□□ -0.38
DCLK1-201ENST00000255448 CWC27Q6UX04 472 aaKnown RBP12.68□□□□□ -0.38
DCLK1-201ENST00000255448 CPLX3Q8WVH0 158 aa12.68□□□□□ -0.38
DCLK1-201ENST00000255448 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
DCLK1-201ENST00000255448 OTUD6BQ8N6M0 293 aa12.68□□□□□ -0.38
DCLK1-201ENST00000255448 TXLNAP40222 546 aa12.67□□□□□ -0.38
DCLK1-201ENST00000255448 RNF216Q9NWF9 866 aaPredicted RBP12.67□□□□□ -0.38
DCLK1-201ENST00000255448 FBXO31Q5XUX0 539 aaPredicted RBP12.67□□□□□ -0.38
DCLK1-201ENST00000255448 SIL1Q9H173 461 aa12.67□□□□□ -0.38
DCLK1-201ENST00000255448 NSD2O96028 1365 aa12.67□□□□□ -0.38
DCLK1-201ENST00000255448 PTGS1P23219 599 aa12.67□□□□□ -0.38
DCLK1-201ENST00000255448 IFFO1Q0D2I5 559 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms