RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 TRPM3Q9HCF6 1732 aaPredicted RBP9.19□□□□□ -0.94
USPL1-201ENST00000255304 ADAMTS2O95450 1211 aa9.19□□□□□ -0.94
USPL1-201ENST00000255304 C17orf53Q8N3J3 647 aaPredicted RBP9.19□□□□□ -0.94
USPL1-201ENST00000255304 SRCIN1Q9C0H9 1055 aa9.19□□□□□ -0.94
USPL1-201ENST00000255304 RAD21O60216 631 aa9.19□□□□□ -0.94
USPL1-201ENST00000255304 PLEKHO1Q53GL0 409 aaPredicted RBP9.19□□□□□ -0.94
USPL1-201ENST00000255304 PRPF40AO75400 957 aaKnown RBP9.19□□□□□ -0.94
USPL1-201ENST00000255304 DDX58O95786 925 aaKnown RBP9.19□□□□□ -0.94
USPL1-201ENST00000255304 EIF4A2Q14240 407 aaKnown RBP9.19□□□□□ -0.94
USPL1-201ENST00000255304 TBX22Q9Y458 520 aa9.19□□□□□ -0.94
USPL1-201ENST00000255304 GNAT3A8MTJ3 354 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 TMEM94Q12767 1356 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 CPSF1Q10570 1443 aaKnown RBP9.18□□□□□ -0.94
USPL1-201ENST00000255304 ITSN1Q15811 1721 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 FIBPO43427 364 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 PDIA4P13667 645 aaKnown RBP9.18□□□□□ -0.94
USPL1-201ENST00000255304 ATP2B1P20020 1258 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 PPIP5K1Q6PFW1 1433 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 SSH2Q76I76 1423 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 TBC1D32Q96NH3 1257 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 CCDC8Q9H0W5 538 aaPredicted RBP9.18□□□□□ -0.94
USPL1-201ENST00000255304 CENPFP49454 3210 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 H3BQV1 296 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 GNAI3P08754 354 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 IFFO2Q5TF58 517 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 CERS3Q8IU89 383 aa9.18□□□□□ -0.94
USPL1-201ENST00000255304 CABP4P57796 275 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 FAM184AQ8NB25 1140 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 PI4KAP2A4QPH2 592 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 OFD1O75665 1012 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 ZKSCAN1P17029 563 aaPredicted RBP9.17□□□□□ -0.94
USPL1-201ENST00000255304 FERMT3Q86UX7 667 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 AACSQ86V21 672 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 PI4KAP1Q8N8J0 262 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 TCEANC2Q96MN5 208 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 LRRCC1Q9C099 1032 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 GDPD2Q9HCC8 539 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 PTCH1Q13635 1447 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 OTUD7AQ8TE49 926 aaPredicted RBP9.17□□□□□ -0.94
USPL1-201ENST00000255304 BOLA2Q9H3K6 86 aa9.17□□□□□ -0.94
USPL1-201ENST00000255304 TATP17735 454 aaPredicted RBP9.16□□□□□ -0.94
USPL1-201ENST00000255304 CCDC173Q0VFZ6 552 aa9.16□□□□□ -0.94
USPL1-201ENST00000255304 SF3A1Q15459 793 aaKnown RBP9.16□□□□□ -0.94
USPL1-201ENST00000255304 SAMD1Q6SPF0 538 aaPredicted RBP9.16□□□□□ -0.94
USPL1-201ENST00000255304 BICDL1Q6ZP65 573 aa9.16□□□□□ -0.94
USPL1-201ENST00000255304 TTC21BQ7Z4L5 1316 aa9.16□□□□□ -0.94
USPL1-201ENST00000255304 ANKRD26Q9UPS8 1709 aa9.16□□□□□ -0.94
USPL1-201ENST00000255304 FLIIQ13045 1269 aa9.16□□□□□ -0.94
USPL1-201ENST00000255304 MTHFSDQ2M296 383 aaKnown RBP9.16□□□□□ -0.94
USPL1-201ENST00000255304 PPP4R3BQ5MIZ7 849 aa9.16□□□□□ -0.94
USPL1-201ENST00000255304 G2E3Q7L622 706 aa9.16□□□□□ -0.94
USPL1-201ENST00000255304 ZBTB3Q9H5J0 574 aa9.16□□□□□ -0.94
USPL1-201ENST00000255304 SPG7Q9UQ90 795 aa9.16□□□□□ -0.94
USPL1-201ENST00000255304 CDC42BPGQ6DT37 1551 aa9.16□□□□□ -0.94
USPL1-201ENST00000255304 FKBP4Q02790 459 aaKnown RBP eCLIP9.15□□□□□ -0.94
USPL1-201ENST00000255304 CFAP44Q96MT7 982 aa9.15□□□□□ -0.94
USPL1-201ENST00000255304 SMC3Q9UQE7 1217 aa9.15□□□□□ -0.94
USPL1-201ENST00000255304 GCC1Q96CN9 775 aa9.15□□□□□ -0.94
USPL1-201ENST00000255304 LTN1O94822 1766 aa9.15□□□□□ -0.94
USPL1-201ENST00000255304 MED1Q15648 1581 aaPredicted RBP9.15□□□□□ -0.95
USPL1-201ENST00000255304 FAM135BQ49AJ0 1406 aa9.15□□□□□ -0.95
USPL1-201ENST00000255304 GPTP24298 496 aa9.15□□□□□ -0.95
USPL1-201ENST00000255304 ZBTB9Q96C00 473 aa9.15□□□□□ -0.95
USPL1-201ENST00000255304 BRCA2P51587 3418 aa9.14□□□□□ -0.95
USPL1-201ENST00000255304 MST1RQ04912 1400 aa9.14□□□□□ -0.95
USPL1-201ENST00000255304 RRP12Q5JTH9 1297 aaKnown RBP9.14□□□□□ -0.95
USPL1-201ENST00000255304 ERICH4A6NGS2 130 aa9.14□□□□□ -0.95
USPL1-201ENST00000255304 TBC1D9Q6ZT07 1266 aa9.14□□□□□ -0.95
USPL1-201ENST00000255304 BICD2Q8TD16 824 aa9.14□□□□□ -0.95
USPL1-201ENST00000255304 EYA1Q99502 592 aa9.14□□□□□ -0.95
USPL1-201ENST00000255304 MYD88Q99836 296 aa9.14□□□□□ -0.95
USPL1-201ENST00000255304 PHAXQ9H814 394 aaKnown RBP9.14□□□□□ -0.95
USPL1-201ENST00000255304 PA2G4Q9UQ80 394 aaKnown RBP9.14□□□□□ -0.95
USPL1-201ENST00000255304 MAP3K19Q56UN5 1328 aa9.14□□□□□ -0.95
USPL1-201ENST00000255304 SYCE3A1L190 88 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 IFT57Q9NWB7 429 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 CHPF2Q9P2E5 772 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 ALS2Q96Q42 1657 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 COL3A1P02461 1466 aaPredicted RBP9.13□□□□□ -0.95
USPL1-201ENST00000255304 ANKRD36BQ8N2N9 1353 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 RAB11FIP4Q86YS3 637 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 DLG5Q8TDM6 1919 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 PRIM1P49642 420 aaKnown RBP9.13□□□□□ -0.95
USPL1-201ENST00000255304 KRT28Q7Z3Y7 464 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 VPS37DQ86XT2 251 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 DDX11Q96FC9 970 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 TRIM35Q9UPQ4 493 aa9.13□□□□□ -0.95
USPL1-201ENST00000255304 VAMP4O75379 141 aa9.12□□□□□ -0.95
USPL1-201ENST00000255304 CCT4P50991 539 aaKnown RBP9.12□□□□□ -0.95
USPL1-201ENST00000255304 RBSNQ9H1K0 784 aa9.12□□□□□ -0.95
USPL1-201ENST00000255304 CWF19L2Q2TBE0 894 aaKnown RBP9.12□□□□□ -0.95
USPL1-201ENST00000255304 RASSF8Q8NHQ8 419 aa9.12□□□□□ -0.95
USPL1-201ENST00000255304 RUFY2Q8WXA3 655 aa9.12□□□□□ -0.95
USPL1-201ENST00000255304 CPLX1O14810 134 aa9.12□□□□□ -0.95
USPL1-201ENST00000255304 ERC2O15083 957 aa9.12□□□□□ -0.95
USPL1-201ENST00000255304 CNTROBQ8N137 903 aa9.12□□□□□ -0.95
USPL1-201ENST00000255304 FMNL2Q96PY5 1086 aa9.12□□□□□ -0.95
USPL1-201ENST00000255304 MAP7D2Q96T17 732 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms