RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 ANO8Q9HCE9 1232 aaPredicted RBP19.1■□□□□ 0.65
RFX1-201ENST00000254325 USP44Q9H0E7 712 aa19.09■□□□□ 0.65
RFX1-201ENST00000254325 HOXB7P09629 217 aa19.09■□□□□ 0.65
RFX1-201ENST00000254325 DDX54Q8TDD1 881 aaKnown RBP19.09■□□□□ 0.65
RFX1-201ENST00000254325 C3P01024 1663 aa19.09■□□□□ 0.65
RFX1-201ENST00000254325 MCTP1Q6DN14 999 aa19.08■□□□□ 0.65
RFX1-201ENST00000254325 AACSQ86V21 672 aa19.08■□□□□ 0.65
RFX1-201ENST00000254325 TNPO1Q92973 898 aaKnown RBP19.08■□□□□ 0.65
RFX1-201ENST00000254325 LARP1Q6PKG0 1096 aaKnown RBP19.08■□□□□ 0.64
RFX1-201ENST00000254325 USP26Q9BXU7 913 aa19.08■□□□□ 0.64
RFX1-201ENST00000254325 FOXD4L6Q3SYB3 417 aaPredicted RBP19.08■□□□□ 0.64
RFX1-201ENST00000254325 KSR2Q6VAB6 950 aa19.08■□□□□ 0.64
RFX1-201ENST00000254325 FOXD4L3Q6VB84 417 aaPredicted RBP19.08■□□□□ 0.64
RFX1-201ENST00000254325 SETD1AO15047 1707 aaKnown RBP19.07■□□□□ 0.64
RFX1-201ENST00000254325 FGD1P98174 961 aa19.07■□□□□ 0.64
RFX1-201ENST00000254325 NFATC2IPQ8NCF5 419 aa19.07■□□□□ 0.64
RFX1-201ENST00000254325 NBPF7P0C2Y1 421 aaPredicted RBP19.07■□□□□ 0.64
RFX1-201ENST00000254325 SSH2Q76I76 1423 aa19.07■□□□□ 0.64
RFX1-201ENST00000254325 CWF19L2Q2TBE0 894 aaKnown RBP19.07■□□□□ 0.64
RFX1-201ENST00000254325 MYD88Q99836 296 aa19.06■□□□□ 0.64
RFX1-201ENST00000254325 CWC27Q6UX04 472 aaKnown RBP19.06■□□□□ 0.64
RFX1-201ENST00000254325 RIMS1Q86UR5 1692 aaKnown RBP19.05■□□□□ 0.64
RFX1-201ENST00000254325 IL27Q8NEV9 243 aa19.05■□□□□ 0.64
RFX1-201ENST00000254325 MCM2P49736 904 aa19.05■□□□□ 0.64
RFX1-201ENST00000254325 UPF3BQ9BZI7 483 aaKnown RBP19.05■□□□□ 0.64
RFX1-201ENST00000254325 SSFA2P28290 1259 aa19.04■□□□□ 0.64
RFX1-201ENST00000254325 ESYT1Q9BSJ8 1104 aa19.04■□□□□ 0.64
RFX1-201ENST00000254325 ALDH1L1O75891 902 aa19.04■□□□□ 0.64
RFX1-201ENST00000254325 GLRX3O76003 335 aaKnown RBP19.04■□□□□ 0.64
RFX1-201ENST00000254325 AKAP12Q02952 1782 aa19.04■□□□□ 0.64
RFX1-201ENST00000254325 FMNL2Q96PY5 1086 aa19.04■□□□□ 0.64
RFX1-201ENST00000254325 ZKSCAN1P17029 563 aaPredicted RBP19.03■□□□□ 0.64
RFX1-201ENST00000254325 PIP4K2AP48426 406 aaPredicted RBP19.03■□□□□ 0.64
RFX1-201ENST00000254325 FSD1Q9BTV5 496 aa19.03■□□□□ 0.64
RFX1-201ENST00000254325 CWC22Q9HCG8 908 aaKnown RBP19.03■□□□□ 0.64
RFX1-201ENST00000254325 TAF7LQ5H9L4 462 aa19.03■□□□□ 0.64
RFX1-201ENST00000254325 XAGE3Q8WTP9 111 aa19.03■□□□□ 0.64
RFX1-201ENST00000254325 TMEM94Q12767 1356 aa19.03■□□□□ 0.64
RFX1-201ENST00000254325 ANTXR1Q9H6X2 564 aa19.03■□□□□ 0.64
RFX1-201ENST00000254325 GIGYF1O75420 1035 aaPredicted RBP19.02■□□□□ 0.64
RFX1-201ENST00000254325 COPS6Q7L5N1 327 aa19.02■□□□□ 0.64
RFX1-201ENST00000254325 PTCD1O75127 700 aaKnown RBP19.02■□□□□ 0.64
RFX1-201ENST00000254325 GORABQ5T7V8 394 aa19.02■□□□□ 0.64
RFX1-201ENST00000254325 PA2G4Q9UQ80 394 aaKnown RBP19.02■□□□□ 0.64
RFX1-201ENST00000254325 ZNF790Q6PG37 636 aa19.02■□□□□ 0.63
RFX1-201ENST00000254325 LINS1Q8NG48 757 aa19.02■□□□□ 0.63
RFX1-201ENST00000254325 GRM8O00222 908 aa19.01■□□□□ 0.63
RFX1-201ENST00000254325 AXIN2Q9Y2T1 843 aa19.01■□□□□ 0.63
RFX1-201ENST00000254325 SNRPA1P09661 255 aaKnown RBP19.01■□□□□ 0.63
RFX1-201ENST00000254325 JARID2Q92833 1246 aaPredicted RBP19.01■□□□□ 0.63
RFX1-201ENST00000254325 DDX21Q9NR30 783 aaKnown RBP eCLIP19.01■□□□□ 0.63
RFX1-201ENST00000254325 CCDC8Q9H0W5 538 aaPredicted RBP19.01■□□□□ 0.63
RFX1-201ENST00000254325 NAP1L2Q9ULW6 460 aaPredicted RBP19.01■□□□□ 0.63
RFX1-201ENST00000254325 CHMLP26374 656 aa19■□□□□ 0.63
RFX1-201ENST00000254325 SSH3Q8TE77 659 aa19■□□□□ 0.63
RFX1-201ENST00000254325 NEUROD6Q96NK8 337 aa19■□□□□ 0.63
RFX1-201ENST00000254325 BEND3Q5T5X7 828 aa18.99■□□□□ 0.63
RFX1-201ENST00000254325 SYTL4Q96C24 671 aaPredicted RBP18.99■□□□□ 0.63
RFX1-201ENST00000254325 ECHDC1Q9NTX5 307 aa18.99■□□□□ 0.63
RFX1-201ENST00000254325 ANKRD13DQ6ZTN6 518 aa18.99■□□□□ 0.63
RFX1-201ENST00000254325 NRKQ7Z2Y5 1582 aa18.99■□□□□ 0.63
RFX1-201ENST00000254325 ATP10DQ9P241 1426 aa18.99■□□□□ 0.63
RFX1-201ENST00000254325 PROSER3Q2NL68 480 aa18.99■□□□□ 0.63
RFX1-201ENST00000254325 ERBB3P21860 1342 aa18.99■□□□□ 0.63
RFX1-201ENST00000254325 ATP5J2-PTCD1G3V325 749 aa18.99■□□□□ 0.63
RFX1-201ENST00000254325 PRAMEF22A3QJZ6 481 aa18.98■□□□□ 0.63
RFX1-201ENST00000254325 IBTKQ9P2D0 1353 aaPredicted RBP18.98■□□□□ 0.63
RFX1-201ENST00000254325 SLC52A2Q9HAB3 445 aa18.98■□□□□ 0.63
RFX1-201ENST00000254325 CD2BP2O95400 341 aaKnown RBP18.98■□□□□ 0.63
RFX1-201ENST00000254325 DCAF5Q96JK2 942 aa18.98■□□□□ 0.63
RFX1-201ENST00000254325 PRPF40AO75400 957 aaKnown RBP18.96■□□□□ 0.63
RFX1-201ENST00000254325 UBE3BQ7Z3V4 1068 aa18.96■□□□□ 0.63
RFX1-201ENST00000254325 DNAJC2Q99543 621 aaKnown RBP18.96■□□□□ 0.63
RFX1-201ENST00000254325 BOLA2Q9H3K6 86 aa18.96■□□□□ 0.63
RFX1-201ENST00000254325 DLG5Q8TDM6 1919 aa18.96■□□□□ 0.63
RFX1-201ENST00000254325 A0A087WZG4 1122 aa18.96■□□□□ 0.63
RFX1-201ENST00000254325 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.96■□□□□ 0.63
RFX1-201ENST00000254325 RAB3GAP1Q15042 981 aa18.96■□□□□ 0.63
RFX1-201ENST00000254325 RNF20Q5VTR2 975 aa18.96■□□□□ 0.63
RFX1-201ENST00000254325 ZNF496Q96IT1 587 aaPredicted RBP18.96■□□□□ 0.63
RFX1-201ENST00000254325 OSBPL3Q9H4L5 887 aa18.96■□□□□ 0.63
RFX1-201ENST00000254325 HIP1O00291 1037 aa18.95■□□□□ 0.62
RFX1-201ENST00000254325 MRE11P49959 708 aa18.95■□□□□ 0.62
RFX1-201ENST00000254325 SMC3Q9UQE7 1217 aa18.95■□□□□ 0.62
RFX1-201ENST00000254325 ZCRB1Q8TBF4 217 aaKnown RBP18.95■□□□□ 0.62
RFX1-201ENST00000254325 PHKG2P15735 406 aa18.94■□□□□ 0.62
RFX1-201ENST00000254325 BICC1Q9H694 974 aaKnown RBP18.94■□□□□ 0.62
RFX1-201ENST00000254325 CAVIN1Q6NZI2 390 aaKnown RBP18.94■□□□□ 0.62
RFX1-201ENST00000254325 RGS12O14924 1447 aa18.94■□□□□ 0.62
RFX1-201ENST00000254325 PEAK1Q9H792 1746 aa18.94■□□□□ 0.62
RFX1-201ENST00000254325 HSP90B1P14625 803 aaKnown RBP18.93■□□□□ 0.62
RFX1-201ENST00000254325 TMX3Q96JJ7 454 aa18.93■□□□□ 0.62
RFX1-201ENST00000254325 BAG4O95429 457 aaKnown RBP18.93■□□□□ 0.62
RFX1-201ENST00000254325 SYAP1Q96A49 352 aaPredicted RBP18.92■□□□□ 0.62
RFX1-201ENST00000254325 JAKMIP1Q96N16 626 aaKnown RBP18.92■□□□□ 0.62
RFX1-201ENST00000254325 ZGPATQ8N5A5 531 aaKnown RBP18.92■□□□□ 0.62
RFX1-201ENST00000254325 PRPF40BQ6NWY9 871 aaKnown RBP18.92■□□□□ 0.62
RFX1-201ENST00000254325 SUCLG2Q96I99 432 aa18.92■□□□□ 0.62
RFX1-201ENST00000254325 RGPD8O14715 1765 aaPredicted RBP18.92■□□□□ 0.62
RFX1-201ENST00000254325 ZBTB3Q9H5J0 574 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms