RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 TSHZ3Q63HK5 1081 aa20.28■□□□□ 0.84
ACTN4-201ENST00000252699 MBD3O95983 291 aa20.28■□□□□ 0.84
ACTN4-201ENST00000252699 NUCB1Q02818 461 aa20.28■□□□□ 0.84
ACTN4-201ENST00000252699 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
ACTN4-201ENST00000252699 AIDAQ96BJ3 306 aa20.28■□□□□ 0.84
ACTN4-201ENST00000252699 SDF4Q9BRK5 362 aa20.28■□□□□ 0.84
ACTN4-201ENST00000252699 CASTP20810 708 aaKnown RBP20.27■□□□□ 0.84
ACTN4-201ENST00000252699 DDB1Q16531 1140 aa20.27■□□□□ 0.84
ACTN4-201ENST00000252699 PRPF40BQ6NWY9 871 aaKnown RBP20.27■□□□□ 0.84
ACTN4-201ENST00000252699 LDHAL6AQ6ZMR3 332 aa20.27■□□□□ 0.84
ACTN4-201ENST00000252699 CDC42BPAQ5VT25 1732 aa20.27■□□□□ 0.84
ACTN4-201ENST00000252699 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.84
ACTN4-201ENST00000252699 RNMTO43148 476 aaKnown RBP20.27■□□□□ 0.84
ACTN4-201ENST00000252699 ALDH1L1O75891 902 aa20.27■□□□□ 0.84
ACTN4-201ENST00000252699 CAVIN1Q6NZI2 390 aaKnown RBP20.27■□□□□ 0.84
ACTN4-201ENST00000252699 TSPOAP1O95153 1857 aa20.27■□□□□ 0.84
ACTN4-201ENST00000252699 RHPN1Q8TCX5 695 aa20.27■□□□□ 0.84
ACTN4-201ENST00000252699 WDR33Q9C0J8 1336 aaKnown RBP20.27■□□□□ 0.84
ACTN4-201ENST00000252699 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.84
ACTN4-201ENST00000252699 ACSBG1Q96GR2 724 aa20.27■□□□□ 0.83
ACTN4-201ENST00000252699 TBC1D9Q6ZT07 1266 aa20.26■□□□□ 0.83
ACTN4-201ENST00000252699 LARP1BQ659C4 914 aaKnown RBP20.26■□□□□ 0.83
ACTN4-201ENST00000252699 ZSCAN31Q96LW9 406 aaPredicted RBP20.26■□□□□ 0.83
ACTN4-201ENST00000252699 GRM8O00222 908 aa20.26■□□□□ 0.83
ACTN4-201ENST00000252699 MYOM2P54296 1465 aa20.26■□□□□ 0.83
ACTN4-201ENST00000252699 CCDC47Q96A33 483 aaKnown RBP20.25■□□□□ 0.83
ACTN4-201ENST00000252699 C8orf37Q96NL8 207 aa20.25■□□□□ 0.83
ACTN4-201ENST00000252699 IKQ13123 557 aaPredicted RBP20.25■□□□□ 0.83
ACTN4-201ENST00000252699 CAVIN4Q5BKX8 364 aa20.25■□□□□ 0.83
ACTN4-201ENST00000252699 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
ACTN4-201ENST00000252699 CIZ1Q9ULV3 898 aaPredicted RBP20.25■□□□□ 0.83
ACTN4-201ENST00000252699 DDX17Q92841 729 aaKnown RBP20.24■□□□□ 0.83
ACTN4-201ENST00000252699 IMMTQ16891 758 aaKnown RBP20.24■□□□□ 0.83
ACTN4-201ENST00000252699 TTC22Q5TAA0 569 aa20.24■□□□□ 0.83
ACTN4-201ENST00000252699 CEBPZQ03701 1054 aaKnown RBP20.24■□□□□ 0.83
ACTN4-201ENST00000252699 ATP8B2P98198 1209 aa20.24■□□□□ 0.83
ACTN4-201ENST00000252699 TCEAL9Q9UHQ7 104 aa20.24■□□□□ 0.83
ACTN4-201ENST00000252699 PLXNC1O60486 1568 aa20.23■□□□□ 0.83
ACTN4-201ENST00000252699 TRIM22Q8IYM9 498 aa20.23■□□□□ 0.83
ACTN4-201ENST00000252699 U3KPZ7 1027 aaPredicted RBP20.23■□□□□ 0.83
ACTN4-201ENST00000252699 ERVK-7P63135 1459 aa20.23■□□□□ 0.83
ACTN4-201ENST00000252699 ZBTB40Q9NUA8 1239 aa20.23■□□□□ 0.83
ACTN4-201ENST00000252699 CCDC69A6NI79 296 aa20.23■□□□□ 0.83
ACTN4-201ENST00000252699 BTG4Q9NY30 223 aa20.23■□□□□ 0.83
ACTN4-201ENST00000252699 EVI5LQ96CN4 794 aa20.23■□□□□ 0.83
ACTN4-201ENST00000252699 LMTK3Q96Q04 1460 aa20.22■□□□□ 0.83
ACTN4-201ENST00000252699 PLEKHG1Q9ULL1 1385 aa20.22■□□□□ 0.83
ACTN4-201ENST00000252699 NUP133Q8WUM0 1156 aa20.22■□□□□ 0.83
ACTN4-201ENST00000252699 CHL1O00533 1208 aa20.22■□□□□ 0.83
ACTN4-201ENST00000252699 SLC5A1P13866 664 aa20.22■□□□□ 0.83
ACTN4-201ENST00000252699 RNF214Q8ND24 703 aa20.22■□□□□ 0.83
ACTN4-201ENST00000252699 ARAP3Q8WWN8 1544 aa20.22■□□□□ 0.83
ACTN4-201ENST00000252699 NBPF6Q5VWK0 638 aa20.22■□□□□ 0.83
ACTN4-201ENST00000252699 NBPF4Q96M43 638 aa20.22■□□□□ 0.83
ACTN4-201ENST00000252699 UBAC1Q9BSL1 405 aa20.22■□□□□ 0.83
ACTN4-201ENST00000252699 ADCY10Q96PN6 1610 aa20.21■□□□□ 0.83
ACTN4-201ENST00000252699 STK38Q15208 465 aa20.21■□□□□ 0.83
ACTN4-201ENST00000252699 ZNF396Q96N95 335 aaPredicted RBP20.21■□□□□ 0.83
ACTN4-201ENST00000252699 SLAIN2Q9P270 581 aa20.21■□□□□ 0.83
ACTN4-201ENST00000252699 PHAXQ9H814 394 aaKnown RBP20.21■□□□□ 0.83
ACTN4-201ENST00000252699 SNRKQ9NRH2 765 aa20.21■□□□□ 0.83
ACTN4-201ENST00000252699 ATP2B2Q01814 1243 aa20.21■□□□□ 0.83
ACTN4-201ENST00000252699 LMBR1LQ6UX01 489 aa20.21■□□□□ 0.83
ACTN4-201ENST00000252699 ATP6V1AP38606 617 aa20.2■□□□□ 0.82
ACTN4-201ENST00000252699 MAP3K12Q12852 859 aa20.2■□□□□ 0.82
ACTN4-201ENST00000252699 GOLIM4O00461 696 aa20.2■□□□□ 0.82
ACTN4-201ENST00000252699 KINO60870 393 aaKnown RBP20.2■□□□□ 0.82
ACTN4-201ENST00000252699 TSR1Q2NL82 804 aaKnown RBP20.2■□□□□ 0.82
ACTN4-201ENST00000252699 CWF19L2Q2TBE0 894 aaKnown RBP20.2■□□□□ 0.82
ACTN4-201ENST00000252699 AK7Q96M32 723 aa20.2■□□□□ 0.82
ACTN4-201ENST00000252699 ANKIB1Q9P2G1 1089 aa20.2■□□□□ 0.82
ACTN4-201ENST00000252699 G2E3Q7L622 706 aa20.2■□□□□ 0.82
ACTN4-201ENST00000252699 LGR6Q9HBX8 967 aa20.2■□□□□ 0.82
ACTN4-201ENST00000252699 ABCC3O15438 1527 aa20.19■□□□□ 0.82
ACTN4-201ENST00000252699 RBM5P52756 815 aaKnown RBP eCLIP20.19■□□□□ 0.822e-6■■■□□ 15
ACTN4-201ENST00000252699 TPM1P09493 284 aa20.19■□□□□ 0.82
ACTN4-201ENST00000252699 PDE1AP54750 535 aa20.19■□□□□ 0.82
ACTN4-201ENST00000252699 KDM5AP29375 1690 aaKnown RBP20.19■□□□□ 0.82
ACTN4-201ENST00000252699 KDM5CP41229 1560 aa20.19■□□□□ 0.82
ACTN4-201ENST00000252699 PCDH11XQ9BZA7 1347 aa20.19■□□□□ 0.82
ACTN4-201ENST00000252699 PCDH11YQ9BZA8 1340 aa20.19■□□□□ 0.82
ACTN4-201ENST00000252699 TPM3P06753 285 aa20.19■□□□□ 0.82
ACTN4-201ENST00000252699 KRT85P78386 507 aa20.19■□□□□ 0.82
ACTN4-201ENST00000252699 SOS1Q07889 1333 aaPredicted RBP20.19■□□□□ 0.82
ACTN4-201ENST00000252699 SDSP20132 328 aa20.18■□□□□ 0.82
ACTN4-201ENST00000252699 CEP85Q6P2H3 762 aa20.18■□□□□ 0.82
ACTN4-201ENST00000252699 CDC5LQ99459 802 aaKnown RBP20.18■□□□□ 0.82
ACTN4-201ENST00000252699 INSRP06213 1382 aa20.18■□□□□ 0.82
ACTN4-201ENST00000252699 TPM2P07951 284 aa20.18■□□□□ 0.82
ACTN4-201ENST00000252699 MRE11P49959 708 aa20.18■□□□□ 0.82
ACTN4-201ENST00000252699 ANKRD20A12PQ8NF67 263 aa20.18■□□□□ 0.82
ACTN4-201ENST00000252699 DDX21Q9NR30 783 aaKnown RBP eCLIP20.18■□□□□ 0.82
ACTN4-201ENST00000252699 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
ACTN4-201ENST00000252699 TBC1D2Q9BYX2 928 aa20.18■□□□□ 0.82
ACTN4-201ENST00000252699 ZMYM4Q5VZL5 1548 aa20.18■□□□□ 0.82
ACTN4-201ENST00000252699 BLMP54132 1417 aaPredicted RBP20.17■□□□□ 0.82
ACTN4-201ENST00000252699 MCM4P33991 863 aa20.17■□□□□ 0.82
ACTN4-201ENST00000252699 ZNF790Q6PG37 636 aa20.17■□□□□ 0.82
ACTN4-201ENST00000252699 DCTPP1Q9H773 170 aa20.17■□□□□ 0.82
ACTN4-201ENST00000252699 BABAM1Q9NWV8 329 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms