RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SSFA2P28290 1259 aa20.89■□□□□ 0.93
FOXA1-201ENST00000250448 EIF4A1P60842 406 aaKnown RBP20.88■□□□□ 0.93
FOXA1-201ENST00000250448 SLC39A6Q13433 755 aa20.88■□□□□ 0.93
FOXA1-201ENST00000250448 ABCC6O95255 1503 aa20.87■□□□□ 0.93
FOXA1-201ENST00000250448 NUTM2BA6NNL0 878 aaPredicted RBP20.87■□□□□ 0.93
FOXA1-201ENST00000250448 NUTM2EB1AL46 878 aaPredicted RBP20.87■□□□□ 0.93
FOXA1-201ENST00000250448 UBAP1LF5GYI3 381 aa20.87■□□□□ 0.93
FOXA1-201ENST00000250448 NUTM2AQ8IVF1 878 aaPredicted RBP20.87■□□□□ 0.93
FOXA1-201ENST00000250448 TRIM44Q96DX7 344 aaPredicted RBP20.87■□□□□ 0.93
FOXA1-201ENST00000250448 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
FOXA1-201ENST00000250448 F6X3S4 739 aa20.87■□□□□ 0.93
FOXA1-201ENST00000250448 API5Q9BZZ5 524 aaKnown RBP20.87■□□□□ 0.93
FOXA1-201ENST00000250448 PRAMEF22A3QJZ6 481 aa20.87■□□□□ 0.93
FOXA1-201ENST00000250448 NFATC2IPQ8NCF5 419 aa20.87■□□□□ 0.93
FOXA1-201ENST00000250448 AHDC1Q5TGY3 1603 aaPredicted RBP20.86■□□□□ 0.93
FOXA1-201ENST00000250448 GOLGA6L22H0YM25 854 aa20.86■□□□□ 0.93
FOXA1-201ENST00000250448 GSPT1P15170 499 aaKnown RBP20.86■□□□□ 0.93
FOXA1-201ENST00000250448 IFNL2Q8IZJ0 200 aa20.86■□□□□ 0.93
FOXA1-201ENST00000250448 TOM1O60784 492 aa20.86■□□□□ 0.93
FOXA1-201ENST00000250448 CLEC17AQ6ZS10 378 aa20.86■□□□□ 0.93
FOXA1-201ENST00000250448 HDGFL1Q5TGJ6 251 aa20.85■□□□□ 0.93
FOXA1-201ENST00000250448 STK31Q9BXU1 1019 aa20.85■□□□□ 0.93
FOXA1-201ENST00000250448 ANXA1P04083 346 aa20.85■□□□□ 0.93
FOXA1-201ENST00000250448 VSIG10Q8N0Z9 540 aa20.85■□□□□ 0.93
FOXA1-201ENST00000250448 DDX54Q8TDD1 881 aaKnown RBP20.85■□□□□ 0.93
FOXA1-201ENST00000250448 RGS12O14924 1447 aa20.84■□□□□ 0.93
FOXA1-201ENST00000250448 SLC4A10Q6U841 1118 aa20.84■□□□□ 0.93
FOXA1-201ENST00000250448 PHLPP1O60346 1717 aa20.84■□□□□ 0.93
FOXA1-201ENST00000250448 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.93
FOXA1-201ENST00000250448 PLEKHM2Q8IWE5 1019 aa20.83■□□□□ 0.93
FOXA1-201ENST00000250448 CARD10Q9BWT7 1032 aa20.83■□□□□ 0.93
FOXA1-201ENST00000250448 BABAM1Q9NWV8 329 aa20.83■□□□□ 0.93
FOXA1-201ENST00000250448 RABEP1Q15276 862 aa20.83■□□□□ 0.93
FOXA1-201ENST00000250448 BAG4O95429 457 aaKnown RBP20.83■□□□□ 0.92
FOXA1-201ENST00000250448 ZCRB1Q8TBF4 217 aaKnown RBP20.83■□□□□ 0.92
FOXA1-201ENST00000250448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.83■□□□□ 0.92
FOXA1-201ENST00000250448 OVOS2A0A0G2JMS6 1433 aa20.82■□□□□ 0.92
FOXA1-201ENST00000250448 IL2RBP14784 551 aa20.82■□□□□ 0.92
FOXA1-201ENST00000250448 SLC52A2Q9HAB3 445 aa20.82■□□□□ 0.92
FOXA1-201ENST00000250448 IBTKQ9P2D0 1353 aaPredicted RBP20.82■□□□□ 0.92
FOXA1-201ENST00000250448 KDM3BQ7LBC6 1761 aa20.82■□□□□ 0.92
FOXA1-201ENST00000250448 KLHL40Q2TBA0 621 aa20.82■□□□□ 0.92
FOXA1-201ENST00000250448 PHAXQ9H814 394 aaKnown RBP20.82■□□□□ 0.92
FOXA1-201ENST00000250448 AK9Q5TCS8 1911 aa20.81■□□□□ 0.92
FOXA1-201ENST00000250448 TTC22Q5TAA0 569 aa20.81■□□□□ 0.92
FOXA1-201ENST00000250448 DCTPP1Q9H773 170 aa20.81■□□□□ 0.92
FOXA1-201ENST00000250448 FLIIQ13045 1269 aa20.8■□□□□ 0.92
FOXA1-201ENST00000250448 FKBP5Q13451 457 aaPredicted RBP20.8■□□□□ 0.92
FOXA1-201ENST00000250448 CCDC173Q0VFZ6 552 aa20.8■□□□□ 0.92
FOXA1-201ENST00000250448 CHPF2Q9P2E5 772 aa20.8■□□□□ 0.92
FOXA1-201ENST00000250448 COL16A1Q07092 1604 aaPredicted RBP20.8■□□□□ 0.92
FOXA1-201ENST00000250448 DDX49Q9Y6V7 483 aaKnown RBP20.79■□□□□ 0.92
FOXA1-201ENST00000250448 DCAF5Q96JK2 942 aa20.79■□□□□ 0.92
FOXA1-201ENST00000250448 SCN11AQ9UI33 1791 aa20.79■□□□□ 0.92
FOXA1-201ENST00000250448 PTPRCP08575 1304 aa20.78■□□□□ 0.92
FOXA1-201ENST00000250448 PKD1L3Q7Z443 1732 aa20.78■□□□□ 0.92
FOXA1-201ENST00000250448 NASPP49321 788 aaPredicted RBP20.78■□□□□ 0.92
FOXA1-201ENST00000250448 PPP1R9BQ96SB3 815 aa20.78■□□□□ 0.92
FOXA1-201ENST00000250448 ATP10DQ9P241 1426 aa20.78■□□□□ 0.92
FOXA1-201ENST00000250448 GIGYF1O75420 1035 aaPredicted RBP20.77■□□□□ 0.92
FOXA1-201ENST00000250448 ZNF790Q6PG37 636 aa20.77■□□□□ 0.92
FOXA1-201ENST00000250448 CABP4P57796 275 aa20.77■□□□□ 0.92
FOXA1-201ENST00000250448 SIPA1L3O60292 1781 aaPredicted RBP20.77■□□□□ 0.91
FOXA1-201ENST00000250448 NUCB2P80303 420 aa20.76■□□□□ 0.91
FOXA1-201ENST00000250448 INTS3Q68E01 1043 aaKnown RBP20.76■□□□□ 0.91
FOXA1-201ENST00000250448 USP26Q9BXU7 913 aa20.76■□□□□ 0.91
FOXA1-201ENST00000250448 PCDH11XQ9BZA7 1347 aa20.76■□□□□ 0.91
FOXA1-201ENST00000250448 PCDH11YQ9BZA8 1340 aa20.76■□□□□ 0.91
FOXA1-201ENST00000250448 PROSER3Q2NL68 480 aa20.76■□□□□ 0.91
FOXA1-201ENST00000250448 ANKRD44Q8N8A2 993 aa20.76■□□□□ 0.91
FOXA1-201ENST00000250448 ADAMTS7Q9UKP4 1686 aa20.76■□□□□ 0.91
FOXA1-201ENST00000250448 ZNF496Q96IT1 587 aaPredicted RBP20.75■□□□□ 0.91
FOXA1-201ENST00000250448 MEIS3Q99687 375 aa20.75■□□□□ 0.91
FOXA1-201ENST00000250448 COL22A1Q8NFW1 1626 aaPredicted RBP20.75■□□□□ 0.91
FOXA1-201ENST00000250448 RBM10P98175 930 aaKnown RBP20.75■□□□□ 0.91
FOXA1-201ENST00000250448 C16orf71Q8IYS4 520 aaPredicted RBP20.75■□□□□ 0.91
FOXA1-201ENST00000250448 PARP4Q9UKK3 1724 aaKnown RBP20.75■□□□□ 0.91
FOXA1-201ENST00000250448 CYP2E1P05181 493 aaPredicted RBP20.74■□□□□ 0.91
FOXA1-201ENST00000250448 PIP4K2AP48426 406 aaPredicted RBP20.74■□□□□ 0.91
FOXA1-201ENST00000250448 MCTP1Q6DN14 999 aa20.74■□□□□ 0.91
FOXA1-201ENST00000250448 ANP32BQ92688 251 aaKnown RBP20.73■□□□□ 0.91
FOXA1-201ENST00000250448 COL14A1Q05707 1796 aaKnown RBP20.73■□□□□ 0.91
FOXA1-201ENST00000250448 ZNF445P59923 1031 aa20.73■□□□□ 0.91
FOXA1-201ENST00000250448 OTUD7AQ8TE49 926 aaPredicted RBP20.73■□□□□ 0.91
FOXA1-201ENST00000250448 KAT6BQ8WYB5 2073 aa20.72■□□□□ 0.91
FOXA1-201ENST00000250448 RRP9O43818 475 aaKnown RBP20.72■□□□□ 0.91
FOXA1-201ENST00000250448 GLIPR1L2Q4G1C9 344 aa20.72■□□□□ 0.91
FOXA1-201ENST00000250448 CEP85Q6P2H3 762 aa20.71■□□□□ 0.91
FOXA1-201ENST00000250448 RPAP2Q8IXW5 612 aaPredicted RBP20.71■□□□□ 0.91
FOXA1-201ENST00000250448 HSP90AA2PQ14568 343 aaPredicted RBP20.71■□□□□ 0.91
FOXA1-201ENST00000250448 TTC5Q8N0Z6 440 aa20.71■□□□□ 0.91
FOXA1-201ENST00000250448 SDSP20132 328 aa20.71■□□□□ 0.91
FOXA1-201ENST00000250448 CASC1Q6TDU7 716 aa20.71■□□□□ 0.91
FOXA1-201ENST00000250448 HEG1Q9ULI3 1381 aa20.71■□□□□ 0.91
FOXA1-201ENST00000250448 HOXB7P09629 217 aa20.7■□□□□ 0.9
FOXA1-201ENST00000250448 LMBRD1Q9NUN5 540 aa20.7■□□□□ 0.9
FOXA1-201ENST00000250448 SOS1Q07889 1333 aaPredicted RBP20.7■□□□□ 0.9
FOXA1-201ENST00000250448 ZSCAN30Q86W11 494 aa20.7■□□□□ 0.9
FOXA1-201ENST00000250448 CWC22Q9HCG8 908 aaKnown RBP20.7■□□□□ 0.9
FOXA1-201ENST00000250448 SHANK3Q9BYB0 1731 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms