RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 MSNP26038 577 aaKnown RBP18.09■□□□□ 0.49
PMPCB-201ENST00000249269 INTS3Q68E01 1043 aaKnown RBP18.09■□□□□ 0.49
PMPCB-201ENST00000249269 DCTPP1Q9H773 170 aa18.09■□□□□ 0.49
PMPCB-201ENST00000249269 CABP2Q9NPB3 220 aa18.09■□□□□ 0.49
PMPCB-201ENST00000249269 DDX49Q9Y6V7 483 aaKnown RBP18.09■□□□□ 0.49
PMPCB-201ENST00000249269 AATKQ6ZMQ8 1374 aa18.09■□□□□ 0.49
PMPCB-201ENST00000249269 ARHGEF40Q8TER5 1519 aa18.09■□□□□ 0.49
PMPCB-201ENST00000249269 CALR3Q96L12 384 aaKnown RBP18.08■□□□□ 0.49
PMPCB-201ENST00000249269 IGSF5Q9NSI5 407 aa18.08■□□□□ 0.49
PMPCB-201ENST00000249269 SLC24A3Q9HC58 644 aa18.08■□□□□ 0.48
PMPCB-201ENST00000249269 RBM28Q9NW13 759 aaKnown RBP18.08■□□□□ 0.48
PMPCB-201ENST00000249269 SRPK2P78362 688 aaKnown RBP18.07■□□□□ 0.48
PMPCB-201ENST00000249269 RPAP2Q8IXW5 612 aaPredicted RBP18.07■□□□□ 0.48
PMPCB-201ENST00000249269 PDLIM2Q96JY6 352 aa18.07■□□□□ 0.48
PMPCB-201ENST00000249269 GTPBP4Q9BZE4 634 aaKnown RBP18.07■□□□□ 0.48
PMPCB-201ENST00000249269 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
PMPCB-201ENST00000249269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.07■□□□□ 0.48
PMPCB-201ENST00000249269 KCNV2Q8TDN2 545 aa18.07■□□□□ 0.48
PMPCB-201ENST00000249269 TMEM131LA2VDJ0 1609 aa18.06■□□□□ 0.48
PMPCB-201ENST00000249269 ST18O60284 1047 aa18.06■□□□□ 0.48
PMPCB-201ENST00000249269 MCM2P49736 904 aa18.06■□□□□ 0.48
PMPCB-201ENST00000249269 IRX5P78411 483 aaPredicted RBP18.06■□□□□ 0.48
PMPCB-201ENST00000249269 RETREG2Q8NC44 543 aa18.06■□□□□ 0.48
PMPCB-201ENST00000249269 GGNBP2Q9H3C7 697 aa18.06■□□□□ 0.48
PMPCB-201ENST00000249269 NOL7Q9UMY1 257 aaKnown RBP18.06■□□□□ 0.48
PMPCB-201ENST00000249269 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
PMPCB-201ENST00000249269 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
PMPCB-201ENST00000249269 CACTIN-AS1Q8N1I8 211 aa18.05■□□□□ 0.48
PMPCB-201ENST00000249269 HELBQ8NG08 1087 aaPredicted RBP18.05■□□□□ 0.48
PMPCB-201ENST00000249269 CT47A1Q5JQC4 288 aaPredicted RBP18.04■□□□□ 0.48
PMPCB-201ENST00000249269 CLEC4GQ6UXB4 293 aa18.04■□□□□ 0.48
PMPCB-201ENST00000249269 REC8O95072 547 aa18.04■□□□□ 0.48
PMPCB-201ENST00000249269 TDO2P48775 406 aa18.04■□□□□ 0.48
PMPCB-201ENST00000249269 WDR78Q5VTH9 848 aa18.04■□□□□ 0.48
PMPCB-201ENST00000249269 ZCRB1Q8TBF4 217 aaKnown RBP18.04■□□□□ 0.48
PMPCB-201ENST00000249269 USP26Q9BXU7 913 aa18.04■□□□□ 0.48
PMPCB-201ENST00000249269 UBA5Q9GZZ9 404 aa18.04■□□□□ 0.48
PMPCB-201ENST00000249269 EXOC5O00471 708 aa18.03■□□□□ 0.48
PMPCB-201ENST00000249269 MBD3O95983 291 aa18.03■□□□□ 0.48
PMPCB-201ENST00000249269 ZSCAN20P17040 1043 aaPredicted RBP18.03■□□□□ 0.48
PMPCB-201ENST00000249269 PLEKHM2Q8IWE5 1019 aa18.03■□□□□ 0.48
PMPCB-201ENST00000249269 CCDC94Q9BW85 323 aaPredicted RBP18.03■□□□□ 0.48
PMPCB-201ENST00000249269 MCCD1P59942 119 aaPredicted RBP18.03■□□□□ 0.48
PMPCB-201ENST00000249269 UVSSAQ2YD98 709 aa18.02■□□□□ 0.48
PMPCB-201ENST00000249269 C1QTNF12Q5T7M4 302 aa18.02■□□□□ 0.48
PMPCB-201ENST00000249269 SIRT2Q8IXJ6 389 aa18.02■□□□□ 0.48
PMPCB-201ENST00000249269 SH3BP5O60239 455 aa18.01■□□□□ 0.47
PMPCB-201ENST00000249269 PRKAR2BP31323 418 aa18.01■□□□□ 0.47
PMPCB-201ENST00000249269 ZBTB9Q96C00 473 aa18.01■□□□□ 0.47
PMPCB-201ENST00000249269 LMBRD1Q9NUN5 540 aa18.01■□□□□ 0.47
PMPCB-201ENST00000249269 ANKRD44Q8N8A2 993 aa18.01■□□□□ 0.47
PMPCB-201ENST00000249269 EDC4Q6P2E9 1401 aaKnown RBP18.01■□□□□ 0.47
PMPCB-201ENST00000249269 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
PMPCB-201ENST00000249269 CD2BP2O95400 341 aaKnown RBP18■□□□□ 0.47
PMPCB-201ENST00000249269 PUS10Q3MIT2 529 aaKnown RBP18■□□□□ 0.47
PMPCB-201ENST00000249269 KIAA1211Q6ZU35 1233 aa18■□□□□ 0.47
PMPCB-201ENST00000249269 MORC4Q8TE76 937 aa18■□□□□ 0.47
PMPCB-201ENST00000249269 KDM4CQ9H3R0 1056 aa18■□□□□ 0.47
PMPCB-201ENST00000249269 SMC3Q9UQE7 1217 aa18■□□□□ 0.47
PMPCB-201ENST00000249269 PREX1Q8TCU6 1659 aa18■□□□□ 0.47
PMPCB-201ENST00000249269 CREB3O43889 395 aa18■□□□□ 0.47
PMPCB-201ENST00000249269 KIAA0232Q92628 1395 aa18■□□□□ 0.47
PMPCB-201ENST00000249269 PTPRCP08575 1304 aa17.99■□□□□ 0.47
PMPCB-201ENST00000249269 MPHOSPH10O00566 681 aaKnown RBP17.99■□□□□ 0.47
PMPCB-201ENST00000249269 TWISTNBQ3B726 338 aaPredicted RBP17.99■□□□□ 0.47
PMPCB-201ENST00000249269 ZSCAN23Q3MJ62 389 aa17.99■□□□□ 0.47
PMPCB-201ENST00000249269 IL17RAQ96F46 866 aa17.99■□□□□ 0.47
PMPCB-201ENST00000249269 ALKQ9UM73 1620 aa17.99■□□□□ 0.47
PMPCB-201ENST00000249269 NEXNQ0ZGT2 675 aa17.99■□□□□ 0.47
PMPCB-201ENST00000249269 ZC3H12AQ5D1E8 599 aaKnown RBP17.99■□□□□ 0.47
PMPCB-201ENST00000249269 OSBPL3Q9H4L5 887 aa17.99■□□□□ 0.47
PMPCB-201ENST00000249269 POLKQ9UBT6 870 aa17.99■□□□□ 0.47
PMPCB-201ENST00000249269 GGT6Q6P531 493 aa17.98■□□□□ 0.47
PMPCB-201ENST00000249269 ARHGEF10LQ9HCE6 1279 aa17.98■□□□□ 0.47
PMPCB-201ENST00000249269 GSPT1P15170 499 aaKnown RBP17.98■□□□□ 0.47
PMPCB-201ENST00000249269 CCDC39Q9UFE4 941 aa17.98■□□□□ 0.47
PMPCB-201ENST00000249269 ZRANB2O95218 330 aaKnown RBP eCLIP17.97■□□□□ 0.47
PMPCB-201ENST00000249269 LIG1P18858 919 aa17.97■□□□□ 0.47
PMPCB-201ENST00000249269 PAIP2Q9BPZ3 127 aaKnown RBP17.97■□□□□ 0.47
PMPCB-201ENST00000249269 CEP126Q9P2H0 1117 aa17.97■□□□□ 0.47
PMPCB-201ENST00000249269 CCDC172P0C7W6 258 aa17.97■□□□□ 0.47
PMPCB-201ENST00000249269 MBIPQ9NS73 344 aa17.97■□□□□ 0.47
PMPCB-201ENST00000249269 RIMS2Q9UQ26 1411 aa17.97■□□□□ 0.47
PMPCB-201ENST00000249269 LRSAM1Q6UWE0 723 aa17.96■□□□□ 0.47
PMPCB-201ENST00000249269 IL13P35225 146 aa17.96■□□□□ 0.47
PMPCB-201ENST00000249269 SYAP1Q96A49 352 aaPredicted RBP17.96■□□□□ 0.47
PMPCB-201ENST00000249269 INTS4Q96HW7 963 aaKnown RBP17.96■□□□□ 0.47
PMPCB-201ENST00000249269 MAGEC2Q9UBF1 373 aaPredicted RBP17.96■□□□□ 0.47
PMPCB-201ENST00000249269 SSH2Q76I76 1423 aa17.96■□□□□ 0.47
PMPCB-201ENST00000249269 ATP10DQ9P241 1426 aa17.96■□□□□ 0.47
PMPCB-201ENST00000249269 IDI1Q13907 227 aa17.95■□□□□ 0.46
PMPCB-201ENST00000249269 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
PMPCB-201ENST00000249269 NRKQ7Z2Y5 1582 aa17.95■□□□□ 0.46
PMPCB-201ENST00000249269 PRAM1Q96QH2 718 aa17.95■□□□□ 0.46
PMPCB-201ENST00000249269 ZKSCAN5Q9Y2L8 839 aa17.95■□□□□ 0.46
PMPCB-201ENST00000249269 HMMRO75330 724 aa17.95■□□□□ 0.46
PMPCB-201ENST00000249269 IFNLR1Q8IU57 520 aaPredicted RBP17.95■□□□□ 0.46
PMPCB-201ENST00000249269 CDK19Q9BWU1 502 aa17.95■□□□□ 0.46
PMPCB-201ENST00000249269 MAP2P11137 1827 aaKnown RBP17.94■□□□□ 0.46
PMPCB-201ENST00000249269 DYNC1I1O14576 645 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms