RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PRAMEF22A3QJZ6 481 aa31.13■■■□□ 2.57
RAB40C-201ENST00000248139 NASPP49321 788 aaPredicted RBP31.13■■■□□ 2.57
RAB40C-201ENST00000248139 ZSCAN23Q3MJ62 389 aa31.13■■■□□ 2.57
RAB40C-201ENST00000248139 LARP6Q9BRS8 491 aaKnown RBP31.13■■■□□ 2.57
RAB40C-201ENST00000248139 BTBD11A6QL63 1104 aa31.12■■■□□ 2.57
RAB40C-201ENST00000248139 TEFQ10587 303 aa31.12■■■□□ 2.57
RAB40C-201ENST00000248139 TRIM44Q96DX7 344 aaPredicted RBP31.12■■■□□ 2.57
RAB40C-201ENST00000248139 DTNBO60941 627 aa31.11■■■□□ 2.57
RAB40C-201ENST00000248139 CEMIPQ8WUJ3 1361 aa31.11■■■□□ 2.57
RAB40C-201ENST00000248139 BEND3Q5T5X7 828 aa31.11■■■□□ 2.57
RAB40C-201ENST00000248139 DNAAF4Q8WXU2 420 aa31.11■■■□□ 2.57
RAB40C-201ENST00000248139 MCCP23508 829 aa31.11■■■□□ 2.57
RAB40C-201ENST00000248139 ESPNB1AK53 854 aa31.1■■■□□ 2.57
RAB40C-201ENST00000248139 PROSER3Q2NL68 480 aa31.1■■■□□ 2.57
RAB40C-201ENST00000248139 ORAI2Q96SN7 254 aa31.1■■■□□ 2.57
RAB40C-201ENST00000248139 LTN1O94822 1766 aa31.09■■■□□ 2.57
RAB40C-201ENST00000248139 CLCN1P35523 988 aa31.09■■■□□ 2.57
RAB40C-201ENST00000248139 PI4K2BQ8TCG2 481 aa31.09■■■□□ 2.57
RAB40C-201ENST00000248139 POLA2Q14181 598 aa31.08■■■□□ 2.57
RAB40C-201ENST00000248139 BABAM1Q9NWV8 329 aa31.08■■■□□ 2.57
RAB40C-201ENST00000248139 TUBGCP6Q96RT7 1819 aa31.08■■■□□ 2.57
RAB40C-201ENST00000248139 RGPD2P0DJD1 1756 aa31.06■■■□□ 2.56
RAB40C-201ENST00000248139 PRIM1P49642 420 aaKnown RBP31.06■■■□□ 2.56
RAB40C-201ENST00000248139 OS9Q13438 667 aaPredicted RBP31.05■■■□□ 2.56
RAB40C-201ENST00000248139 TPRNQ4KMQ1 711 aa31.05■■■□□ 2.56
RAB40C-201ENST00000248139 NAP1L5Q96NT1 182 aaPredicted RBP31.05■■■□□ 2.56
RAB40C-201ENST00000248139 RBSNQ9H1K0 784 aa31.05■■■□□ 2.56
RAB40C-201ENST00000248139 PA2G4Q9UQ80 394 aaKnown RBP31.05■■■□□ 2.56
RAB40C-201ENST00000248139 GDPD2Q9HCC8 539 aa31.04■■■□□ 2.56
RAB40C-201ENST00000248139 TMEM63CQ9P1W3 806 aa31.04■■■□□ 2.56
RAB40C-201ENST00000248139 SPG7Q9UQ90 795 aa31.04■■■□□ 2.56
RAB40C-201ENST00000248139 CACNA1FO60840 1977 aa31.04■■■□□ 2.56
RAB40C-201ENST00000248139 CWF19L2Q2TBE0 894 aaKnown RBP31.04■■■□□ 2.56
RAB40C-201ENST00000248139 CWC27Q6UX04 472 aaKnown RBP31.04■■■□□ 2.56
RAB40C-201ENST00000248139 ADCY9O60503 1353 aa31.03■■■□□ 2.56
RAB40C-201ENST00000248139 KIF1BPQ96EK5 621 aa31.02■■■□□ 2.56
RAB40C-201ENST00000248139 RAB11FIP3O75154 756 aa31.02■■■□□ 2.56
RAB40C-201ENST00000248139 CPA1P15085 419 aa31.02■■■□□ 2.56
RAB40C-201ENST00000248139 TRHP20396 242 aaPredicted RBP31.02■■■□□ 2.56
RAB40C-201ENST00000248139 CUL4AQ13619 759 aa31.02■■■□□ 2.56
RAB40C-201ENST00000248139 ANKLE2Q86XL3 938 aa31.02■■■□□ 2.56
RAB40C-201ENST00000248139 MAP3K2Q9Y2U5 619 aa31.02■■■□□ 2.56
RAB40C-201ENST00000248139 GCP02774 474 aa31.01■■■□□ 2.56
RAB40C-201ENST00000248139 ZNF445P59923 1031 aa31.01■■■□□ 2.56
RAB40C-201ENST00000248139 PXDNLA1KZ92 1463 aa31.01■■■□□ 2.56
RAB40C-201ENST00000248139 AKAP4Q5JQC9 854 aa31.01■■■□□ 2.55
RAB40C-201ENST00000248139 RASEFQ8IZ41 740 aa31.01■■■□□ 2.55
RAB40C-201ENST00000248139 SYCE3A1L190 88 aa31■■■□□ 2.55
RAB40C-201ENST00000248139 BRD1O95696 1058 aa31■■■□□ 2.55
RAB40C-201ENST00000248139 ANAPC15P60006 121 aa31■■■□□ 2.55
RAB40C-201ENST00000248139 AXIN2Q9Y2T1 843 aa31■■■□□ 2.55
RAB40C-201ENST00000248139 AIMP1Q12904 312 aaKnown RBP31■■■□□ 2.55
RAB40C-201ENST00000248139 PXDNQ92626 1479 aa31■■■□□ 2.55
RAB40C-201ENST00000248139 NFAT5O94916 1531 aa30.99■■■□□ 2.55
RAB40C-201ENST00000248139 HSPA4P34932 840 aa30.99■■■□□ 2.55
RAB40C-201ENST00000248139 PLEKHO1Q53GL0 409 aaPredicted RBP30.99■■■□□ 2.55
RAB40C-201ENST00000248139 RNMTO43148 476 aaKnown RBP30.99■■■□□ 2.55
RAB40C-201ENST00000248139 MCM2P49736 904 aa30.98■■■□□ 2.55
RAB40C-201ENST00000248139 C9orf78Q9NZ63 289 aaPredicted RBP30.98■■■□□ 2.55
RAB40C-201ENST00000248139 SGSM2O43147 1006 aa30.98■■■□□ 2.55
RAB40C-201ENST00000248139 C1orf141Q5JVX7 400 aa30.97■■■□□ 2.55
RAB40C-201ENST00000248139 DDX54Q8TDD1 881 aaKnown RBP30.97■■■□□ 2.55
RAB40C-201ENST00000248139 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.97■■■□□ 2.55
RAB40C-201ENST00000248139 KCNH5Q8NCM2 988 aa30.96■■■□□ 2.55
RAB40C-201ENST00000248139 ANKRD24Q8TF21 1146 aa30.96■■■□□ 2.55
RAB40C-201ENST00000248139 SNX14Q9Y5W7 946 aa30.96■■■□□ 2.55
RAB40C-201ENST00000248139 AOX1Q06278 1338 aa30.95■■■□□ 2.55
RAB40C-201ENST00000248139 CCDC173Q0VFZ6 552 aa30.95■■■□□ 2.55
RAB40C-201ENST00000248139 DBF4Q9UBU7 674 aaPredicted RBP30.95■■■□□ 2.55
RAB40C-201ENST00000248139 GIGYF1O75420 1035 aaPredicted RBP30.94■■■□□ 2.54
RAB40C-201ENST00000248139 CNTROBQ8N137 903 aa30.94■■■□□ 2.54
RAB40C-201ENST00000248139 LSG1Q9H089 658 aaKnown RBP30.94■■■□□ 2.54
RAB40C-201ENST00000248139 ANP32BQ92688 251 aaKnown RBP30.93■■■□□ 2.54
RAB40C-201ENST00000248139 GADD45BO75293 160 aaPredicted RBP30.93■■■□□ 2.54
RAB40C-201ENST00000248139 ARHGEF25Q86VW2 580 aa30.93■■■□□ 2.54
RAB40C-201ENST00000248139 RNF214Q8ND24 703 aa30.93■■■□□ 2.54
RAB40C-201ENST00000248139 PPP1R9BQ96SB3 815 aa30.93■■■□□ 2.54
RAB40C-201ENST00000248139 RAD50Q92878 1312 aa30.92■■■□□ 2.54
RAB40C-201ENST00000248139 SLC39A6Q13433 755 aa30.92■■■□□ 2.54
RAB40C-201ENST00000248139 HOXB7P09629 217 aa30.91■■■□□ 2.54
RAB40C-201ENST00000248139 ZC3H6P61129 1189 aaKnown RBP30.91■■■□□ 2.54
RAB40C-201ENST00000248139 MED1Q15648 1581 aaPredicted RBP30.9■■■□□ 2.54
RAB40C-201ENST00000248139 AK2P54819 239 aa30.9■■■□□ 2.54
RAB40C-201ENST00000248139 PTH1RQ03431 593 aa30.9■■■□□ 2.54
RAB40C-201ENST00000248139 INTS4Q96HW7 963 aaKnown RBP30.9■■■□□ 2.54
RAB40C-201ENST00000248139 N4BP2Q86UW6 1770 aaPredicted RBP30.9■■■□□ 2.54
RAB40C-201ENST00000248139 CLASRPQ8N2M8 674 aaKnown RBP30.89■■■□□ 2.54
RAB40C-201ENST00000248139 USP54Q70EL1 1684 aa30.89■■■□□ 2.54
RAB40C-201ENST00000248139 KIAA1211Q6ZU35 1233 aa30.89■■■□□ 2.53
RAB40C-201ENST00000248139 KSR2Q6VAB6 950 aa30.88■■■□□ 2.53
RAB40C-201ENST00000248139 KLHDC4Q8TBB5 520 aa30.88■■■□□ 2.53
RAB40C-201ENST00000248139 SIL1Q9H173 461 aa30.88■■■□□ 2.53
RAB40C-201ENST00000248139 KDM3BQ7LBC6 1761 aa30.88■■■□□ 2.53
RAB40C-201ENST00000248139 CHD2O14647 1828 aaKnown RBP30.88■■■□□ 2.53
RAB40C-201ENST00000248139 PIP4K2AP48426 406 aaPredicted RBP30.87■■■□□ 2.53
RAB40C-201ENST00000248139 AMOTQ4VCS5 1084 aa30.87■■■□□ 2.53
RAB40C-201ENST00000248139 SUCLG2Q96I99 432 aa30.87■■■□□ 2.53
RAB40C-201ENST00000248139 DIAPH3Q9NSV4 1193 aa30.87■■■□□ 2.53
RAB40C-201ENST00000248139 RUFY3Q7L099 469 aa30.87■■■□□ 2.53
RAB40C-201ENST00000248139 JARID2Q92833 1246 aaPredicted RBP30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms