RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 CT47B1P0C2W7 299 aaPredicted RBP21.5■■□□□ 1.03
CDKN1A-201ENST00000244741 KCNQ4P56696 695 aa21.5■■□□□ 1.03
CDKN1A-201ENST00000244741 HEG1Q9ULI3 1381 aa21.49■■□□□ 1.03
CDKN1A-201ENST00000244741 KCPQ6ZWJ8 1503 aa21.49■■□□□ 1.03
CDKN1A-201ENST00000244741 IGHDP01880 384 aa21.49■■□□□ 1.03
CDKN1A-201ENST00000244741 SLC4A9Q96Q91 983 aa21.49■■□□□ 1.03
CDKN1A-201ENST00000244741 SNRPA1P09661 255 aaKnown RBP21.48■■□□□ 1.03
CDKN1A-201ENST00000244741 NBR1Q14596 966 aa21.48■■□□□ 1.03
CDKN1A-201ENST00000244741 PAPPAQ13219 1627 aa21.47■■□□□ 1.03
CDKN1A-201ENST00000244741 SLC4A2P04920 1241 aa21.47■■□□□ 1.03
CDKN1A-201ENST00000244741 SBF2Q86WG5 1849 aa21.47■■□□□ 1.03
CDKN1A-201ENST00000244741 TNNQ9UQP3 1299 aa21.47■■□□□ 1.03
CDKN1A-201ENST00000244741 PALLDQ8WX93 1383 aa21.47■■□□□ 1.03
CDKN1A-201ENST00000244741 C5P01031 1676 aa21.46■■□□□ 1.03
CDKN1A-201ENST00000244741 RGS3P49796 1198 aa21.46■■□□□ 1.03
CDKN1A-201ENST00000244741 CLUAP1Q96AJ1 413 aa21.46■■□□□ 1.03
CDKN1A-201ENST00000244741 CHPF2Q9P2E5 772 aa21.46■■□□□ 1.03
CDKN1A-201ENST00000244741 DNAJC10Q8IXB1 793 aa21.46■■□□□ 1.03
CDKN1A-201ENST00000244741 MRPL50Q8N5N7 158 aaKnown RBP21.46■■□□□ 1.03
CDKN1A-201ENST00000244741 NOB1Q9ULX3 412 aaKnown RBP21.46■■□□□ 1.03
CDKN1A-201ENST00000244741 UBR2Q8IWV8 1755 aa21.45■■□□□ 1.02
CDKN1A-201ENST00000244741 PROSER3Q2NL68 480 aa21.45■■□□□ 1.02
CDKN1A-201ENST00000244741 FAM161AQ3B820 660 aa21.45■■□□□ 1.02
CDKN1A-201ENST00000244741 CCDC30Q5VVM6 783 aa21.45■■□□□ 1.02
CDKN1A-201ENST00000244741 BCL11BQ9C0K0 894 aaPredicted RBP21.45■■□□□ 1.02
CDKN1A-201ENST00000244741 BTAF1O14981 1849 aa21.44■■□□□ 1.02
CDKN1A-201ENST00000244741 ALDH1L2Q3SY69 923 aa21.44■■□□□ 1.02
CDKN1A-201ENST00000244741 C8orf34Q49A92 452 aa21.44■■□□□ 1.02
CDKN1A-201ENST00000244741 G2E3Q7L622 706 aa21.44■■□□□ 1.02
CDKN1A-201ENST00000244741 NHSQ6T4R5 1651 aa21.44■■□□□ 1.02
CDKN1A-201ENST00000244741 STK31Q9BXU1 1019 aa21.44■■□□□ 1.02
CDKN1A-201ENST00000244741 LOC102724428A0A0B4J2F2 783 aa21.43■■□□□ 1.02
CDKN1A-201ENST00000244741 MYL6BP14649 208 aa21.43■■□□□ 1.02
CDKN1A-201ENST00000244741 ATP6V1AP38606 617 aa21.43■■□□□ 1.02
CDKN1A-201ENST00000244741 SIK1P57059 783 aa21.43■■□□□ 1.02
CDKN1A-201ENST00000244741 A1BGP04217 495 aa21.43■■□□□ 1.02
CDKN1A-201ENST00000244741 HOXB7P09629 217 aa21.43■■□□□ 1.02
CDKN1A-201ENST00000244741 RLBP1P12271 317 aa21.43■■□□□ 1.02
CDKN1A-201ENST00000244741 ZNF428Q96B54 188 aa21.43■■□□□ 1.02
CDKN1A-201ENST00000244741 PHAXQ9H814 394 aaKnown RBP21.42■■□□□ 1.02
CDKN1A-201ENST00000244741 SMARCC1Q92922 1105 aaPredicted RBP21.41■■□□□ 1.02
CDKN1A-201ENST00000244741 ITPK1Q13572 414 aa21.4■■□□□ 1.02
CDKN1A-201ENST00000244741 PDIA6Q15084 440 aa21.39■■□□□ 1.01
CDKN1A-201ENST00000244741 ZNF330Q9Y3S2 320 aaPredicted RBP21.39■■□□□ 1.01
CDKN1A-201ENST00000244741 SOS1Q07889 1333 aaPredicted RBP21.39■■□□□ 1.01
CDKN1A-201ENST00000244741 AIMP1Q12904 312 aaKnown RBP21.38■■□□□ 1.01
CDKN1A-201ENST00000244741 VSIG10Q8N0Z9 540 aa21.38■■□□□ 1.01
CDKN1A-201ENST00000244741 DBF4Q9UBU7 674 aaPredicted RBP21.38■■□□□ 1.01
CDKN1A-201ENST00000244741 NBPF26B4DH59 902 aa21.37■■□□□ 1.01
CDKN1A-201ENST00000244741 TRIM27P14373 513 aa21.37■■□□□ 1.01
CDKN1A-201ENST00000244741 NBPF14Q5TI25 921 aa21.37■■□□□ 1.01
CDKN1A-201ENST00000244741 NBPF10Q6P3W6 841 aaKnown RBP21.37■■□□□ 1.01
CDKN1A-201ENST00000244741 NBPF15Q8N660 670 aa21.37■■□□□ 1.01
CDKN1A-201ENST00000244741 APBA3O96018 575 aa21.37■■□□□ 1.01
CDKN1A-201ENST00000244741 ZKSCAN2Q63HK3 967 aa21.37■■□□□ 1.01
CDKN1A-201ENST00000244741 KIF16BQ96L93 1317 aa21.36■■□□□ 1.01
CDKN1A-201ENST00000244741 CYP19A1P11511 503 aaPredicted RBP21.36■■□□□ 1.01
CDKN1A-201ENST00000244741 FLIIQ13045 1269 aa21.36■■□□□ 1.01
CDKN1A-201ENST00000244741 DDRGK1Q96HY6 314 aa21.36■■□□□ 1.01
CDKN1A-201ENST00000244741 CCNL1Q9UK58 526 aaPredicted RBP21.36■■□□□ 1.01
CDKN1A-201ENST00000244741 PCDHB15Q9Y5E8 787 aa21.36■■□□□ 1.01
CDKN1A-201ENST00000244741 STARD3NLO95772 234 aa21.36■■□□□ 1.01
CDKN1A-201ENST00000244741 F6X3S4 739 aa21.35■■□□□ 1.01
CDKN1A-201ENST00000244741 FKBP5Q13451 457 aaPredicted RBP21.35■■□□□ 1.01
CDKN1A-201ENST00000244741 AAMPQ13685 434 aa21.35■■□□□ 1.01
CDKN1A-201ENST00000244741 DDX21Q9NR30 783 aaKnown RBP eCLIP21.35■■□□□ 1.01
CDKN1A-201ENST00000244741 ATF7IPQ6VMQ6 1270 aa21.34■■□□□ 1.01
CDKN1A-201ENST00000244741 LINC00116Q8NCU8 138 aa21.34■■□□□ 1.01
CDKN1A-201ENST00000244741 TEX13AQ9BXU3 409 aaPredicted RBP21.34■■□□□ 1.01
CDKN1A-201ENST00000244741 ZBTB1Q9Y2K1 713 aa21.34■■□□□ 1.01
CDKN1A-201ENST00000244741 BRPF1P55201 1214 aaPredicted RBP21.33■■□□□ 1.01
CDKN1A-201ENST00000244741 SMIM5Q71RC9 77 aa21.33■■□□□ 1.01
CDKN1A-201ENST00000244741 ARXQ96QS3 562 aa21.33■■□□□ 1.01
CDKN1A-201ENST00000244741 LRRC4BQ9NT99 713 aa21.33■■□□□ 1.01
CDKN1A-201ENST00000244741 TJP1Q07157 1748 aa21.33■■□□□ 1.01
CDKN1A-201ENST00000244741 IPO8O15397 1037 aaKnown RBP21.33■■□□□ 1
CDKN1A-201ENST00000244741 FTSJ3Q8IY81 847 aaKnown RBP21.33■■□□□ 1
CDKN1A-201ENST00000244741 LAMB4A4D0S4 1761 aa21.32■■□□□ 1
CDKN1A-201ENST00000244741 CRKLP46109 303 aaKnown RBP21.32■■□□□ 1
CDKN1A-201ENST00000244741 COPS6Q7L5N1 327 aa21.32■■□□□ 1
CDKN1A-201ENST00000244741 XAGE3Q8WTP9 111 aa21.32■■□□□ 1
CDKN1A-201ENST00000244741 HYPKQ9NX55 129 aa21.31■■□□□ 1
CDKN1A-201ENST00000244741 SLC4A10Q6U841 1118 aa21.31■■□□□ 1
CDKN1A-201ENST00000244741 LRP10Q7Z4F1 713 aa21.31■■□□□ 1
CDKN1A-201ENST00000244741 PROM2Q8N271 834 aa21.31■■□□□ 1
CDKN1A-201ENST00000244741 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
CDKN1A-201ENST00000244741 INTS5Q6P9B9 1019 aaKnown RBP21.3■■□□□ 1
CDKN1A-201ENST00000244741 DZIP1LQ8IYY4 767 aaKnown RBP21.3■■□□□ 1
CDKN1A-201ENST00000244741 DEKP35659 375 aaKnown RBP21.3■■□□□ 1
CDKN1A-201ENST00000244741 MVPQ14764 893 aaKnown RBP21.3■■□□□ 1
CDKN1A-201ENST00000244741 PI4KAP2A4QPH2 592 aa21.29■■□□□ 1
CDKN1A-201ENST00000244741 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
CDKN1A-201ENST00000244741 PI4KAP1Q8N8J0 262 aa21.29■■□□□ 1
CDKN1A-201ENST00000244741 TMEM57Q8N5G2 664 aa21.29■■□□□ 1
CDKN1A-201ENST00000244741 CCDC87Q9NVE4 849 aa21.29■■□□□ 1
CDKN1A-201ENST00000244741 MYH14Q7Z406 1995 aaKnown RBP21.28■■□□□ 1
CDKN1A-201ENST00000244741 TXNRD1Q16881 649 aa21.28■■□□□ 1
CDKN1A-201ENST00000244741 PTPRCP08575 1304 aa21.28■■□□□ 1
CDKN1A-201ENST00000244741 LY75O60449 1722 aa21.27■■□□□ 1
CDKN1A-201ENST00000244741 EN1Q05925 392 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms