RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 TBC1D2BQ9UPU7 963 aa10.98□□□□□ -0.65
COL21A1-201ENST00000244728 POLR1AO95602 1720 aaPredicted RBP10.97□□□□□ -0.65
COL21A1-201ENST00000244728 CASTP20810 708 aaKnown RBP10.97□□□□□ -0.65
COL21A1-201ENST00000244728 PPP1R9BQ96SB3 815 aa10.97□□□□□ -0.65
COL21A1-201ENST00000244728 MPHOSPH8Q99549 860 aa10.97□□□□□ -0.65
COL21A1-201ENST00000244728 PPFIA3O75145 1194 aa10.97□□□□□ -0.65
COL21A1-201ENST00000244728 KCNA6P17658 529 aa10.97□□□□□ -0.65
COL21A1-201ENST00000244728 HSPA2P54652 639 aa10.97□□□□□ -0.65
COL21A1-201ENST00000244728 KIF1BPQ96EK5 621 aa10.97□□□□□ -0.65
COL21A1-201ENST00000244728 PDRG1Q9NUG6 133 aa10.97□□□□□ -0.65
COL21A1-201ENST00000244728 GPTP24298 496 aa10.96□□□□□ -0.65
COL21A1-201ENST00000244728 USP48Q86UV5 1035 aa10.96□□□□□ -0.65
COL21A1-201ENST00000244728 DDX11Q96FC9 970 aa10.96□□□□□ -0.65
COL21A1-201ENST00000244728 PRIMPOLQ96LW4 560 aa10.96□□□□□ -0.65
COL21A1-201ENST00000244728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.96□□□□□ -0.65
COL21A1-201ENST00000244728 PDE1AP54750 535 aa10.96□□□□□ -0.65
COL21A1-201ENST00000244728 PKP1Q13835 747 aa10.96□□□□□ -0.65
COL21A1-201ENST00000244728 MAP3K11Q16584 847 aa10.96□□□□□ -0.65
COL21A1-201ENST00000244728 GIMAP6Q6P9H5 292 aa10.96□□□□□ -0.65
COL21A1-201ENST00000244728 ANKRD24Q8TF21 1146 aa10.96□□□□□ -0.65
COL21A1-201ENST00000244728 PRDM15P57071 1507 aaPredicted RBP10.96□□□□□ -0.65
COL21A1-201ENST00000244728 A0A087WZG4 1122 aa10.96□□□□□ -0.66
COL21A1-201ENST00000244728 IDH1O75874 414 aaKnown RBP10.96□□□□□ -0.66
COL21A1-201ENST00000244728 MTHFSDQ2M296 383 aaKnown RBP10.96□□□□□ -0.66
COL21A1-201ENST00000244728 BLOC1S2Q6QNY1 142 aa10.96□□□□□ -0.66
COL21A1-201ENST00000244728 PPP1R42Q7Z4L9 355 aa10.96□□□□□ -0.66
COL21A1-201ENST00000244728 DBF4Q9UBU7 674 aaPredicted RBP10.96□□□□□ -0.66
COL21A1-201ENST00000244728 PLA2R1Q13018 1463 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 PRPF40BQ6NWY9 871 aaKnown RBP10.95□□□□□ -0.66
COL21A1-201ENST00000244728 AEBP2Q6ZN18 517 aaPredicted RBP10.95□□□□□ -0.66
COL21A1-201ENST00000244728 PTPRTO14522 1441 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 A0A1W2PP64 1363 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 ZNF518AQ6AHZ1 1483 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 MAP3K2Q9Y2U5 619 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 PPIP5K1Q6PFW1 1433 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 LARP1Q6PKG0 1096 aaKnown RBP10.95□□□□□ -0.66
COL21A1-201ENST00000244728 UBE3BQ7Z3V4 1068 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 CHAMP1Q96JM3 812 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 C16orf45Q96MC5 204 aaPredicted RBP10.95□□□□□ -0.66
COL21A1-201ENST00000244728 CNPY2Q9Y2B0 182 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 MAST1Q9Y2H9 1570 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 STX6O43752 255 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 UVSSAQ2YD98 709 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 FILIP1Q7Z7B0 1213 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 AMOTL1Q8IY63 956 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 SPATA32Q96LK8 384 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 TMEM63CQ9P1W3 806 aa10.95□□□□□ -0.66
COL21A1-201ENST00000244728 UHRF1BP1LA0JNW5 1464 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 AMOTQ4VCS5 1084 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 CKAP2LQ8IYA6 745 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 SNRKQ9NRH2 765 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 ABCF2Q9UG63 623 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 ABCC10Q5T3U5 1492 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 SAFBQ15424 915 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL21A1-201ENST00000244728 ESYT1Q9BSJ8 1104 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 LIMCH1Q9UPQ0 1083 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 RIMS2Q9UQ26 1411 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 KINO60870 393 aaKnown RBP10.94□□□□□ -0.66
COL21A1-201ENST00000244728 CEP85Q6P2H3 762 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 EYA1Q99502 592 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 CHPF2Q9P2E5 772 aa10.94□□□□□ -0.66
COL21A1-201ENST00000244728 UBE2HP62256 183 aa10.93□□□□□ -0.66
COL21A1-201ENST00000244728 MNS1Q8NEH6 495 aa10.93□□□□□ -0.66
COL21A1-201ENST00000244728 PPP6R1Q9UPN7 881 aa10.93□□□□□ -0.66
COL21A1-201ENST00000244728 HIP1O00291 1037 aa10.93□□□□□ -0.66
COL21A1-201ENST00000244728 ZSCAN31Q96LW9 406 aaPredicted RBP10.93□□□□□ -0.66
COL21A1-201ENST00000244728 TMOD3Q9NYL9 352 aa10.93□□□□□ -0.66
COL21A1-201ENST00000244728 SYNMO15061 1565 aa10.93□□□□□ -0.66
COL21A1-201ENST00000244728 PTPRCP08575 1304 aa10.93□□□□□ -0.66
COL21A1-201ENST00000244728 GLRX3O76003 335 aaKnown RBP10.93□□□□□ -0.66
COL21A1-201ENST00000244728 GSPT1P15170 499 aaKnown RBP10.93□□□□□ -0.66
COL21A1-201ENST00000244728 TERF1P54274 439 aa10.93□□□□□ -0.66
COL21A1-201ENST00000244728 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
COL21A1-201ENST00000244728 CCDC66A2RUB6 948 aa10.92□□□□□ -0.66
COL21A1-201ENST00000244728 TEX35Q5T0J7 233 aa10.92□□□□□ -0.66
COL21A1-201ENST00000244728 PIBF1Q8WXW3 757 aa10.92□□□□□ -0.66
COL21A1-201ENST00000244728 TRPM1Q7Z4N2 1603 aa10.92□□□□□ -0.66
COL21A1-201ENST00000244728 KDM5AP29375 1690 aaKnown RBP10.92□□□□□ -0.66
COL21A1-201ENST00000244728 MAP3K19Q56UN5 1328 aa10.92□□□□□ -0.66
COL21A1-201ENST00000244728 C17orf53Q8N3J3 647 aaPredicted RBP10.92□□□□□ -0.66
COL21A1-201ENST00000244728 CCDC94Q9BW85 323 aaPredicted RBP10.92□□□□□ -0.66
COL21A1-201ENST00000244728 TRIM34Q9BYJ4 488 aa10.92□□□□□ -0.66
COL21A1-201ENST00000244728 SMC2O95347 1197 aa10.92□□□□□ -0.66
COL21A1-201ENST00000244728 TNNT1P13805 278 aa10.92□□□□□ -0.66
COL21A1-201ENST00000244728 METTL24Q5JXM2 366 aa10.92□□□□□ -0.66
COL21A1-201ENST00000244728 ZSCAN22P10073 491 aaPredicted RBP10.91□□□□□ -0.66
COL21A1-201ENST00000244728 NUP133Q8WUM0 1156 aa10.91□□□□□ -0.66
COL21A1-201ENST00000244728 ARGLU1Q9NWB6 273 aaPredicted RBP10.91□□□□□ -0.66
COL21A1-201ENST00000244728 ERVK-7P63135 1459 aa10.91□□□□□ -0.66
COL21A1-201ENST00000244728 STARD3NLO95772 234 aa10.91□□□□□ -0.66
COL21A1-201ENST00000244728 GJB2P29033 226 aa10.91□□□□□ -0.66
COL21A1-201ENST00000244728 CCDC82Q8N4S0 544 aa10.91□□□□□ -0.66
COL21A1-201ENST00000244728 TSC1Q92574 1164 aa10.91□□□□□ -0.66
COL21A1-201ENST00000244728 TCEANC2Q96MN5 208 aa10.91□□□□□ -0.66
COL21A1-201ENST00000244728 NAT10Q9H0A0 1025 aaKnown RBP10.91□□□□□ -0.66
COL21A1-201ENST00000244728 ARHGEF5Q12774 1597 aa10.91□□□□□ -0.66
COL21A1-201ENST00000244728 TFIP11Q9UBB9 837 aaKnown RBP10.91□□□□□ -0.66
COL21A1-201ENST00000244728 COPS6Q7L5N1 327 aa10.9□□□□□ -0.66
COL21A1-201ENST00000244728 ZNF500O60304 480 aaPredicted RBP10.9□□□□□ -0.66
COL21A1-201ENST00000244728 IGSF3O75054 1194 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms