RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 FANCD2Q9BXW9 1451 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 TXLNAP40222 546 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 SHTN1A0MZ66 631 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 CCT4P50991 539 aaKnown RBP8.76□□□□□ -1.01
RIF1-201ENST00000243326 DNM1Q05193 864 aaKnown RBP8.76□□□□□ -1.01
RIF1-201ENST00000243326 SYCP1Q15431 976 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 CCDC148Q8NFR7 591 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 FYCO1Q9BQS8 1478 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 CHMP4BP1P59074 171 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 CLCN1P35523 988 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 AFMP43652 599 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 SMARCC1Q92922 1105 aaPredicted RBP8.75□□□□□ -1.01
RIF1-201ENST00000243326 MNAT1P51948 309 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 KIAA1107Q9UPP5 1409 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 SMIM23A6NLE4 172 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 KIF5CO60282 957 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 ESCO1Q5FWF5 840 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 HGSO14964 777 aaPredicted RBP8.75□□□□□ -1.01
RIF1-201ENST00000243326 CCDC96Q2M329 555 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 LRSAM1Q6UWE0 723 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 TAF4BQ92750 862 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 GNG11P61952 73 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 WDR63Q8IWG1 891 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 ANO10Q9NW15 660 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 ERLIN2O94905 339 aa8.75□□□□□ -1.01
RIF1-201ENST00000243326 CCDC94Q9BW85 323 aaPredicted RBP8.75□□□□□ -1.01
RIF1-201ENST00000243326 PAIP2Q9BPZ3 127 aaKnown RBP8.75□□□□□ -1.01
RIF1-201ENST00000243326 BTBD11A6QL63 1104 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 HLTFQ14527 1009 aaKnown RBP eCLIP8.74□□□□□ -1.014e-7■■□□□ 14.4
RIF1-201ENST00000243326 FAM173BQ6P4H8 233 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 PPP6R1Q9UPN7 881 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 PCF11O94913 1555 aaKnown RBP8.74□□□□□ -1.01
RIF1-201ENST00000243326 GADD45BO75293 160 aaPredicted RBP8.74□□□□□ -1.01
RIF1-201ENST00000243326 PRPF4BQ13523 1007 aaKnown RBP8.74□□□□□ -1.01
RIF1-201ENST00000243326 NFE2L2Q16236 605 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 KIF6Q6ZMV9 814 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 SMTNL1A8MU46 457 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 IFFO1Q0D2I5 559 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 TAF7Q15545 349 aaPredicted RBP8.74□□□□□ -1.01
RIF1-201ENST00000243326 KRT24Q2M2I5 525 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 PTPRGP23470 1445 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 ABCF2Q9UG63 623 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 MYO1BO43795 1136 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 ANKRD1Q15327 319 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 CYB5RLQ6IPT4 315 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 KSR1Q8IVT5 923 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 PUS7Q96PZ0 661 aaKnown RBP8.74□□□□□ -1.01
RIF1-201ENST00000243326 LRPPRCP42704 1394 aaKnown RBP8.74□□□□□ -1.01
RIF1-201ENST00000243326 AQRO60306 1485 aaKnown RBP eCLIP8.74□□□□□ -1.014e-7■■■■■ 36.2
RIF1-201ENST00000243326 MEIS3Q99687 375 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 JADE2Q9NQC1 790 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 NME9Q86XW9 330 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 C8orf76Q96K31 380 aa8.74□□□□□ -1.01
RIF1-201ENST00000243326 MAP2K1Q02750 393 aaPredicted RBP8.73□□□□□ -1.01
RIF1-201ENST00000243326 SART3Q15020 963 aaKnown RBP8.73□□□□□ -1.01
RIF1-201ENST00000243326 ATAD2BQ9ULI0 1458 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 TMEM110-MUSTN1A8MSY1 372 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 MACROD2A1Z1Q3 448 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 LUZP1Q86V48 1076 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 PTCD1O75127 700 aaKnown RBP8.73□□□□□ -1.01
RIF1-201ENST00000243326 ZNF165P49910 485 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 JMYQ8N9B5 988 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 OTUD7AQ8TE49 926 aaPredicted RBP8.73□□□□□ -1.01
RIF1-201ENST00000243326 PLIN2Q99541 437 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 LZTFL1Q9NQ48 299 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 GOLGA8BA8MQT2 603 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 RIOK3O14730 519 aaKnown RBP8.73□□□□□ -1.01
RIF1-201ENST00000243326 TRIM22Q8IYM9 498 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 SLC26A8Q96RN1 970 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 SBNO2Q9Y2G9 1366 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 MARCKSP29966 332 aaPredicted RBP8.73□□□□□ -1.01
RIF1-201ENST00000243326 STX17P56962 302 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 CTNNBL1Q8WYA6 563 aaPredicted RBP8.73□□□□□ -1.01
RIF1-201ENST00000243326 ZSCAN12O43309 604 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 CCDC158Q5M9N0 1113 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 MPRIPQ6WCQ1 1025 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 SKILP12757 684 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 CABP4P57796 275 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 KLHL40Q2TBA0 621 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 SYT10Q6XYQ8 523 aa8.73□□□□□ -1.01
RIF1-201ENST00000243326 ZC3H6P61129 1189 aaKnown RBP8.72□□□□□ -1.01
RIF1-201ENST00000243326 ZSCAN31Q96LW9 406 aaPredicted RBP8.72□□□□□ -1.01
RIF1-201ENST00000243326 SDSP20132 328 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 ARID5AQ03989 594 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 STIM1Q13586 685 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.72□□□□□ -1.01
RIF1-201ENST00000243326 UIMC1Q96RL1 719 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 LMOD1P29536 600 aaPredicted RBP8.72□□□□□ -1.01
RIF1-201ENST00000243326 KRT222Q8N1A0 295 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 GOLIM4O00461 696 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 KRBA2Q6ZNG9 492 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 ERC1Q8IUD2 1116 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 HINFPQ9BQA5 517 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 TDRD12Q587J7 1177 aaKnown RBP8.72□□□□□ -1.01
RIF1-201ENST00000243326 TMCO4Q5TGY1 634 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 MPHOSPH10O00566 681 aaKnown RBP8.72□□□□□ -1.01
RIF1-201ENST00000243326 CASKIN1Q8WXD9 1431 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 ATP5J2-PTCD1G3V325 749 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 ZEB2O60315 1214 aa8.72□□□□□ -1.01
RIF1-201ENST00000243326 STX1AQ16623 288 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms