RNA–Protein interactions for RNA: ENST00000239906.9

FAM53C-201, Transcript of family with sequence similarity 53 member C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53C, Length 4,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53C-201ENST00000239906 SNRPA1P09661 255 aaKnown RBP13.1□□□□□ -0.31
FAM53C-201ENST00000239906 GPS2Q13227 327 aa13.1□□□□□ -0.31
FAM53C-201ENST00000239906 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
FAM53C-201ENST00000239906 CFAP74Q9C0B2 1584 aa13.1□□□□□ -0.31
FAM53C-201ENST00000239906 CCP110O43303 1012 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 PTCD1O75127 700 aaKnown RBP13.09□□□□□ -0.31
FAM53C-201ENST00000239906 MYOM2P54296 1465 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 MPNDQ8N594 471 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 RHPN1Q8TCX5 695 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 TNPO1Q92973 898 aaKnown RBP13.09□□□□□ -0.31
FAM53C-201ENST00000239906 CCDC85AQ96PX6 553 aaPredicted RBP13.09□□□□□ -0.31
FAM53C-201ENST00000239906 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
FAM53C-201ENST00000239906 PDE1AP54750 535 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 PRPF40BQ6NWY9 871 aaKnown RBP13.09□□□□□ -0.31
FAM53C-201ENST00000239906 WASF1Q92558 559 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 NUP62CLQ9H1M0 184 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 A0A087WZG4 1122 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 TXLNAP40222 546 aa13.09□□□□□ -0.31
FAM53C-201ENST00000239906 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
FAM53C-201ENST00000239906 ESPNB1AK53 854 aa13.08□□□□□ -0.32
FAM53C-201ENST00000239906 ME1P48163 572 aa13.08□□□□□ -0.32
FAM53C-201ENST00000239906 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
FAM53C-201ENST00000239906 HMG20BQ9P0W2 317 aa13.08□□□□□ -0.32
FAM53C-201ENST00000239906 ZNF652Q9Y2D9 606 aa13.08□□□□□ -0.32
FAM53C-201ENST00000239906 IFIT1P09914 478 aaKnown RBP13.08□□□□□ -0.32
FAM53C-201ENST00000239906 SDSP20132 328 aa13.08□□□□□ -0.32
FAM53C-201ENST00000239906 IL13P35225 146 aa13.08□□□□□ -0.32
FAM53C-201ENST00000239906 IGHMBP2P38935 993 aaKnown RBP13.08□□□□□ -0.32
FAM53C-201ENST00000239906 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
FAM53C-201ENST00000239906 PREX2Q70Z35 1606 aa13.07□□□□□ -0.32
FAM53C-201ENST00000239906 MTHFSDQ2M296 383 aaKnown RBP13.07□□□□□ -0.32
FAM53C-201ENST00000239906 METTL24Q5JXM2 366 aa13.07□□□□□ -0.32
FAM53C-201ENST00000239906 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
FAM53C-201ENST00000239906 CCDC69A6NI79 296 aa13.07□□□□□ -0.32
FAM53C-201ENST00000239906 IFIT5Q13325 482 aaKnown RBP13.07□□□□□ -0.32
FAM53C-201ENST00000239906 MLH3Q9UHC1 1453 aa13.07□□□□□ -0.32
FAM53C-201ENST00000239906 DACH1Q9UI36 760 aa13.07□□□□□ -0.32
FAM53C-201ENST00000239906 MAP3K19Q56UN5 1328 aa13.07□□□□□ -0.32
FAM53C-201ENST00000239906 HOXB7P09629 217 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 KSR2Q6VAB6 950 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
FAM53C-201ENST00000239906 LINS1Q8NG48 757 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 MAP3K5Q99683 1374 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 FILIP1LQ4L180 1135 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
FAM53C-201ENST00000239906 EYA1Q99502 592 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 CEP57L1Q8IYX8 460 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 STK11IPQ8N1F8 1099 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
FAM53C-201ENST00000239906 MAP3K11Q16584 847 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 FERMT3Q86UX7 667 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 CCDC83Q8IWF9 413 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 PDILTQ8N807 584 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 TSPYL6Q8N831 410 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 SPC24Q8NBT2 197 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 CCDC8Q9H0W5 538 aaPredicted RBP13.05□□□□□ -0.32
FAM53C-201ENST00000239906 ARGLU1Q9NWB6 273 aaPredicted RBP13.05□□□□□ -0.32
FAM53C-201ENST00000239906 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
FAM53C-201ENST00000239906 ZBTB7BO15156 539 aaPredicted RBP13.05□□□□□ -0.32
FAM53C-201ENST00000239906 SSFA2P28290 1259 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 TNNT3P45378 269 aaPredicted RBP13.05□□□□□ -0.32
FAM53C-201ENST00000239906 KLHL40Q2TBA0 621 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 CCDC183Q5T5S1 534 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 CWC25Q9NXE8 425 aaPredicted RBP13.05□□□□□ -0.32
FAM53C-201ENST00000239906 NOL7Q9UMY1 257 aaKnown RBP13.05□□□□□ -0.32
FAM53C-201ENST00000239906 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 MNS1Q8NEH6 495 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 IP6K1Q92551 441 aa13.05□□□□□ -0.32
FAM53C-201ENST00000239906 CHL1O00533 1208 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 SMC2O95347 1197 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 ZSCAN30Q86W11 494 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 UBAC1Q9BSL1 405 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 TCEAL9Q9UHQ7 104 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 PLA2R1Q13018 1463 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 BAG4O95429 457 aaKnown RBP13.04□□□□□ -0.32
FAM53C-201ENST00000239906 AIDAQ96BJ3 306 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 TDO2P48775 406 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 TTC41PQ6P2S7 1318 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 CCDC196A0A1B0GTZ2 297 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 GRM8O00222 908 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 IDH1O75874 414 aaKnown RBP13.04□□□□□ -0.32
FAM53C-201ENST00000239906 C19orf44Q9H6X5 657 aa13.04□□□□□ -0.32
FAM53C-201ENST00000239906 CTDP1Q9Y5B0 961 aaPredicted RBP13.04□□□□□ -0.32
FAM53C-201ENST00000239906 TTC37Q6PGP7 1564 aa13.03□□□□□ -0.32
FAM53C-201ENST00000239906 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
FAM53C-201ENST00000239906 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
FAM53C-201ENST00000239906 CHPF2Q9P2E5 772 aa13.03□□□□□ -0.32
FAM53C-201ENST00000239906 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
FAM53C-201ENST00000239906 NUTM2BA6NNL0 878 aaPredicted RBP13.03□□□□□ -0.32
FAM53C-201ENST00000239906 NUTM2EB1AL46 878 aaPredicted RBP13.03□□□□□ -0.32
FAM53C-201ENST00000239906 NUTM2AQ8IVF1 878 aaPredicted RBP13.03□□□□□ -0.32
FAM53C-201ENST00000239906 LRP2BPQ9P2M1 347 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms