RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
CCDC170-201ENST00000239374 CCDC8Q9H0W5 538 aaPredicted RBP12.98□□□□□ -0.33
CCDC170-201ENST00000239374 PRDM15P57071 1507 aaPredicted RBP12.98□□□□□ -0.33
CCDC170-201ENST00000239374 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
CCDC170-201ENST00000239374 KRT32Q14532 448 aa12.98□□□□□ -0.33
CCDC170-201ENST00000239374 TSR1Q2NL82 804 aaKnown RBP12.98□□□□□ -0.33
CCDC170-201ENST00000239374 HSP90AB2PQ58FF8 381 aa12.98□□□□□ -0.33
CCDC170-201ENST00000239374 ZNF530Q6P9A1 599 aaPredicted RBP12.98□□□□□ -0.33
CCDC170-201ENST00000239374 CCP110O43303 1012 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 AK2P54819 239 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 UBXN4Q92575 508 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 SYT1P21579 422 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 ATP8B2P98198 1209 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 SMAP1Q8IYB5 467 aaPredicted RBP12.97□□□□□ -0.33
CCDC170-201ENST00000239374 ECHDC1Q9NTX5 307 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 DACT1Q9NYF0 836 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 AKAP17AQ02040 695 aaKnown RBP12.97□□□□□ -0.33
CCDC170-201ENST00000239374 ANO6Q4KMQ2 910 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 HSP90B2PQ58FF3 399 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 PTGS1P23219 599 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 MSH6P52701 1360 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC170-201ENST00000239374 TTLL5Q6EMB2 1281 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 MYRIPQ8NFW9 859 aa12.97□□□□□ -0.33
CCDC170-201ENST00000239374 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.33
CCDC170-201ENST00000239374 DNAAF4Q8WXU2 420 aa12.96□□□□□ -0.33
CCDC170-201ENST00000239374 PIBF1Q8WXW3 757 aa12.96□□□□□ -0.33
CCDC170-201ENST00000239374 SLC26A8Q96RN1 970 aa12.96□□□□□ -0.33
CCDC170-201ENST00000239374 DTNBO60941 627 aa12.96□□□□□ -0.33
CCDC170-201ENST00000239374 ATP2B1P20020 1258 aa12.96□□□□□ -0.33
CCDC170-201ENST00000239374 FAM69CQ0P6D2 419 aa12.96□□□□□ -0.33
CCDC170-201ENST00000239374 ANO10Q9NW15 660 aa12.96□□□□□ -0.33
CCDC170-201ENST00000239374 ERVK-7P63135 1459 aa12.96□□□□□ -0.33
CCDC170-201ENST00000239374 GUCY1B3Q02153 619 aa12.96□□□□□ -0.34
CCDC170-201ENST00000239374 SYNMO15061 1565 aa12.96□□□□□ -0.34
CCDC170-201ENST00000239374 CPA1P15085 419 aa12.96□□□□□ -0.34
CCDC170-201ENST00000239374 TAF3Q5VWG9 929 aa12.96□□□□□ -0.34
CCDC170-201ENST00000239374 CEP135Q66GS9 1140 aa12.95□□□□□ -0.34
CCDC170-201ENST00000239374 BTBD11A6QL63 1104 aa12.95□□□□□ -0.34
CCDC170-201ENST00000239374 SAFBQ15424 915 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC170-201ENST00000239374 PPIP5K1Q6PFW1 1433 aa12.95□□□□□ -0.34
CCDC170-201ENST00000239374 DHX16O60231 1041 aaKnown RBP12.95□□□□□ -0.34
CCDC170-201ENST00000239374 BRD1O95696 1058 aa12.95□□□□□ -0.34
CCDC170-201ENST00000239374 G2E3Q7L622 706 aa12.95□□□□□ -0.34
CCDC170-201ENST00000239374 KDM5AP29375 1690 aaKnown RBP12.95□□□□□ -0.34
CCDC170-201ENST00000239374 KIF2AO00139 706 aaPredicted RBP12.95□□□□□ -0.34
CCDC170-201ENST00000239374 MYL6BP14649 208 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 TYRO3Q06418 890 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
CCDC170-201ENST00000239374 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 PAXBP1Q9Y5B6 917 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 PPFIA3O75145 1194 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 USHBP1Q8N6Y0 703 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 ANXA1P04083 346 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 LUZP1Q86V48 1076 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 EVI5LQ96CN4 794 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 DNAJC25Q9H1X3 360 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 CWC15Q9P013 229 aaKnown RBP12.94□□□□□ -0.34
CCDC170-201ENST00000239374 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC170-201ENST00000239374 V9GYY5 206 aaPredicted RBP12.94□□□□□ -0.34
CCDC170-201ENST00000239374 TMCO3Q6UWJ1 677 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 TRERF1Q96PN7 1200 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
CCDC170-201ENST00000239374 ABCC4O15439 1325 aa12.93□□□□□ -0.34
CCDC170-201ENST00000239374 ANKRD20A12PQ8NF67 263 aa12.93□□□□□ -0.34
CCDC170-201ENST00000239374 CD109Q6YHK3 1445 aa12.93□□□□□ -0.34
CCDC170-201ENST00000239374 NEMFO60524 1076 aa12.93□□□□□ -0.34
CCDC170-201ENST00000239374 CFAP100Q494V2 611 aa12.93□□□□□ -0.34
CCDC170-201ENST00000239374 FOXO3O43524 673 aa12.93□□□□□ -0.34
CCDC170-201ENST00000239374 IPO7O95373 1038 aaKnown RBP12.93□□□□□ -0.34
CCDC170-201ENST00000239374 DHX8Q14562 1220 aaKnown RBP12.93□□□□□ -0.34
CCDC170-201ENST00000239374 STK11IPQ8N1F8 1099 aa12.93□□□□□ -0.34
CCDC170-201ENST00000239374 URI1O94763 535 aaPredicted RBP12.92□□□□□ -0.34
CCDC170-201ENST00000239374 GTPBP4Q9BZE4 634 aaKnown RBP12.92□□□□□ -0.34
CCDC170-201ENST00000239374 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
CCDC170-201ENST00000239374 SKILP12757 684 aa12.92□□□□□ -0.34
CCDC170-201ENST00000239374 FSIP1Q8NA03 581 aa12.92□□□□□ -0.34
CCDC170-201ENST00000239374 NLRP2Q9NX02 1062 aa12.92□□□□□ -0.34
CCDC170-201ENST00000239374 JMYQ8N9B5 988 aa12.92□□□□□ -0.34
CCDC170-201ENST00000239374 RBM8AQ9Y5S9 174 aaKnown RBP12.92□□□□□ -0.34
CCDC170-201ENST00000239374 ZNF518AQ6AHZ1 1483 aa12.92□□□□□ -0.34
CCDC170-201ENST00000239374 CTAGE5O15320 804 aa12.92□□□□□ -0.34
CCDC170-201ENST00000239374 BRPF1P55201 1214 aaPredicted RBP12.91□□□□□ -0.34
CCDC170-201ENST00000239374 STX1AQ16623 288 aa12.91□□□□□ -0.34
CCDC170-201ENST00000239374 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
CCDC170-201ENST00000239374 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
CCDC170-201ENST00000239374 BIN1O00499 593 aa12.91□□□□□ -0.34
CCDC170-201ENST00000239374 POLR3GO15318 223 aaPredicted RBP12.91□□□□□ -0.34
CCDC170-201ENST00000239374 IL13P35225 146 aa12.91□□□□□ -0.34
CCDC170-201ENST00000239374 CCT2P78371 535 aaKnown RBP12.91□□□□□ -0.34
CCDC170-201ENST00000239374 SBNO2Q9Y2G9 1366 aa12.91□□□□□ -0.34
CCDC170-201ENST00000239374 ACBD3Q9H3P7 528 aa12.91□□□□□ -0.34
CCDC170-201ENST00000239374 PALD1Q9ULE6 856 aa12.91□□□□□ -0.34
CCDC170-201ENST00000239374 SMTNL1A8MU46 457 aa12.91□□□□□ -0.34
CCDC170-201ENST00000239374 CCDC70Q6NSX1 233 aa12.91□□□□□ -0.34
CCDC170-201ENST00000239374 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms