RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 LRP6O75581 1613 aa19.17■□□□□ 0.66
HDHD3-201ENST00000238379 MEIS3Q99687 375 aa19.17■□□□□ 0.66
HDHD3-201ENST00000238379 TMOD3Q9NYL9 352 aa19.17■□□□□ 0.66
HDHD3-201ENST00000238379 UBR2Q8IWV8 1755 aa19.17■□□□□ 0.66
HDHD3-201ENST00000238379 SIRT2Q8IXJ6 389 aa19.16■□□□□ 0.66
HDHD3-201ENST00000238379 SMC5Q8IY18 1101 aa19.16■□□□□ 0.66
HDHD3-201ENST00000238379 CCDC9Q9Y3X0 531 aaKnown RBP19.16■□□□□ 0.66
HDHD3-201ENST00000238379 KCPQ6ZWJ8 1503 aa19.16■□□□□ 0.66
HDHD3-201ENST00000238379 PI4KAP2A4QPH2 592 aa19.16■□□□□ 0.66
HDHD3-201ENST00000238379 PI4KAP1Q8N8J0 262 aa19.16■□□□□ 0.66
HDHD3-201ENST00000238379 N4BP2Q86UW6 1770 aaPredicted RBP19.15■□□□□ 0.66
HDHD3-201ENST00000238379 ADCY9O60503 1353 aa19.15■□□□□ 0.66
HDHD3-201ENST00000238379 VPS72Q15906 364 aa19.15■□□□□ 0.66
HDHD3-201ENST00000238379 DDB1Q16531 1140 aa19.15■□□□□ 0.66
HDHD3-201ENST00000238379 PIGBQ92521 554 aa19.15■□□□□ 0.66
HDHD3-201ENST00000238379 DNAAF4Q8WXU2 420 aa19.14■□□□□ 0.65
HDHD3-201ENST00000238379 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
HDHD3-201ENST00000238379 ATP10DQ9P241 1426 aa19.13■□□□□ 0.65
HDHD3-201ENST00000238379 LRP10Q7Z4F1 713 aa19.13■□□□□ 0.65
HDHD3-201ENST00000238379 PTCD1O75127 700 aaKnown RBP19.12■□□□□ 0.65
HDHD3-201ENST00000238379 BEND3Q5T5X7 828 aa19.12■□□□□ 0.65
HDHD3-201ENST00000238379 KSR2Q6VAB6 950 aa19.12■□□□□ 0.65
HDHD3-201ENST00000238379 ITGB4P16144 1822 aa19.12■□□□□ 0.65
HDHD3-201ENST00000238379 BCL9O00512 1426 aa19.12■□□□□ 0.65
HDHD3-201ENST00000238379 LAMB4A4D0S4 1761 aa19.11■□□□□ 0.65
HDHD3-201ENST00000238379 RGS3P49796 1198 aa19.11■□□□□ 0.65
HDHD3-201ENST00000238379 SRCIN1Q9C0H9 1055 aa19.11■□□□□ 0.65
HDHD3-201ENST00000238379 ASAP1Q9ULH1 1129 aa19.11■□□□□ 0.65
HDHD3-201ENST00000238379 MYL6BP14649 208 aa19.11■□□□□ 0.65
HDHD3-201ENST00000238379 CEP85Q6P2H3 762 aa19.11■□□□□ 0.65
HDHD3-201ENST00000238379 RPAP2Q8IXW5 612 aaPredicted RBP19.11■□□□□ 0.65
HDHD3-201ENST00000238379 ANKRD44Q8N8A2 993 aa19.11■□□□□ 0.65
HDHD3-201ENST00000238379 USP44Q9H0E7 712 aa19.11■□□□□ 0.65
HDHD3-201ENST00000238379 ATG3Q9NT62 314 aa19.11■□□□□ 0.65
HDHD3-201ENST00000238379 GNAI3P08754 354 aa19.1■□□□□ 0.65
HDHD3-201ENST00000238379 MARCH10Q8NA82 808 aaPredicted RBP19.1■□□□□ 0.65
HDHD3-201ENST00000238379 MAP3K2Q9Y2U5 619 aa19.1■□□□□ 0.65
HDHD3-201ENST00000238379 USP21Q9UK80 565 aa19.09■□□□□ 0.65
HDHD3-201ENST00000238379 ERBB4Q15303 1308 aa19.09■□□□□ 0.65
HDHD3-201ENST00000238379 DDX58O95786 925 aaKnown RBP19.09■□□□□ 0.65
HDHD3-201ENST00000238379 AIMP1Q12904 312 aaKnown RBP19.09■□□□□ 0.65
HDHD3-201ENST00000238379 FAM98CQ17RN3 349 aaKnown RBP19.09■□□□□ 0.65
HDHD3-201ENST00000238379 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
HDHD3-201ENST00000238379 GNAI2P04899 355 aa19.08■□□□□ 0.64
HDHD3-201ENST00000238379 PRIM1P49642 420 aaKnown RBP19.08■□□□□ 0.64
HDHD3-201ENST00000238379 COPS6Q7L5N1 327 aa19.08■□□□□ 0.64
HDHD3-201ENST00000238379 XAGE3Q8WTP9 111 aa19.08■□□□□ 0.64
HDHD3-201ENST00000238379 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.08■□□□□ 0.64
HDHD3-201ENST00000238379 NBPF26B4DH59 902 aa19.07■□□□□ 0.64
HDHD3-201ENST00000238379 PIP4K2AP48426 406 aaPredicted RBP19.07■□□□□ 0.64
HDHD3-201ENST00000238379 NBPF14Q5TI25 921 aa19.07■□□□□ 0.64
HDHD3-201ENST00000238379 NBPF10Q6P3W6 841 aaKnown RBP19.07■□□□□ 0.64
HDHD3-201ENST00000238379 NBPF15Q8N660 670 aa19.07■□□□□ 0.64
HDHD3-201ENST00000238379 RBM19Q9Y4C8 960 aaKnown RBP19.07■□□□□ 0.64
HDHD3-201ENST00000238379 NUCB1Q02818 461 aa19.07■□□□□ 0.64
HDHD3-201ENST00000238379 VSIG10Q8N0Z9 540 aa19.07■□□□□ 0.64
HDHD3-201ENST00000238379 DOT1LQ8TEK3 1739 aa19.06■□□□□ 0.64
HDHD3-201ENST00000238379 SYTL4Q96C24 671 aaPredicted RBP19.06■□□□□ 0.64
HDHD3-201ENST00000238379 DCTPP1Q9H773 170 aa19.06■□□□□ 0.64
HDHD3-201ENST00000238379 ALDH1L1O75891 902 aa19.05■□□□□ 0.64
HDHD3-201ENST00000238379 MEX3CQ5U5Q3 659 aaKnown RBP19.05■□□□□ 0.64
HDHD3-201ENST00000238379 UBTFL1P0CB47 393 aaPredicted RBP19.04■□□□□ 0.64
HDHD3-201ENST00000238379 RIC3Q7Z5B4 369 aa19.04■□□□□ 0.64
HDHD3-201ENST00000238379 LINS1Q8NG48 757 aa19.04■□□□□ 0.64
HDHD3-201ENST00000238379 KAT6BQ8WYB5 2073 aa19.04■□□□□ 0.64
HDHD3-201ENST00000238379 A1BGP04217 495 aa19.04■□□□□ 0.64
HDHD3-201ENST00000238379 PDE4AP27815 886 aa19.04■□□□□ 0.64
HDHD3-201ENST00000238379 ANKRD13DQ6ZTN6 518 aa19.04■□□□□ 0.64
HDHD3-201ENST00000238379 TEX13AQ9BXU3 409 aaPredicted RBP19.04■□□□□ 0.64
HDHD3-201ENST00000238379 LRRFIP2Q9Y608 721 aaKnown RBP19.03■□□□□ 0.64
HDHD3-201ENST00000238379 NBPF7P0C2Y1 421 aaPredicted RBP19.02■□□□□ 0.64
HDHD3-201ENST00000238379 CWF19L2Q2TBE0 894 aaKnown RBP19.02■□□□□ 0.64
HDHD3-201ENST00000238379 CHD1LQ86WJ1 897 aa19.02■□□□□ 0.64
HDHD3-201ENST00000238379 DNAJC10Q8IXB1 793 aa19.02■□□□□ 0.64
HDHD3-201ENST00000238379 SLC4A9Q96Q91 983 aa19.02■□□□□ 0.64
HDHD3-201ENST00000238379 RBM42Q9BTD8 480 aaKnown RBP19.02■□□□□ 0.64
HDHD3-201ENST00000238379 BACH2Q9BYV9 841 aa19.02■□□□□ 0.64
HDHD3-201ENST00000238379 AFF2P51816 1311 aa19.02■□□□□ 0.64
HDHD3-201ENST00000238379 METTL22Q9BUU2 404 aaPredicted RBP19.02■□□□□ 0.63
HDHD3-201ENST00000238379 IBTKQ9P2D0 1353 aaPredicted RBP19.01■□□□□ 0.63
HDHD3-201ENST00000238379 HMMRO75330 724 aa19.01■□□□□ 0.63
HDHD3-201ENST00000238379 IGKV5-2P06315 115 aa19.01■□□□□ 0.63
HDHD3-201ENST00000238379 ATP8B2P98198 1209 aa19.01■□□□□ 0.63
HDHD3-201ENST00000238379 ANKRD45Q5TZF3 282 aa19.01■□□□□ 0.63
HDHD3-201ENST00000238379 ACSBG1Q96GR2 724 aa19.01■□□□□ 0.63
HDHD3-201ENST00000238379 PLBD2Q8NHP8 589 aa19■□□□□ 0.63
HDHD3-201ENST00000238379 GJD4Q96KN9 370 aaPredicted RBP19■□□□□ 0.63
HDHD3-201ENST00000238379 LNPKQ9C0E8 428 aa19■□□□□ 0.63
HDHD3-201ENST00000238379 THSD7AQ9UPZ6 1657 aa18.99■□□□□ 0.63
HDHD3-201ENST00000238379 PNMA6EA0A0J9YXQ4 647 aa18.99■□□□□ 0.63
HDHD3-201ENST00000238379 STARD3NLO95772 234 aa18.99■□□□□ 0.63
HDHD3-201ENST00000238379 NEXNQ0ZGT2 675 aa18.99■□□□□ 0.63
HDHD3-201ENST00000238379 UTYO14607 1347 aa18.98■□□□□ 0.63
HDHD3-201ENST00000238379 NEURL1BA8MQ27 555 aa18.98■□□□□ 0.63
HDHD3-201ENST00000238379 TTLL7Q6ZT98 887 aa18.98■□□□□ 0.63
HDHD3-201ENST00000238379 MYD88Q99836 296 aa18.98■□□□□ 0.63
HDHD3-201ENST00000238379 C9orf78Q9NZ63 289 aaPredicted RBP18.98■□□□□ 0.63
HDHD3-201ENST00000238379 GRM8O00222 908 aa18.97■□□□□ 0.63
HDHD3-201ENST00000238379 CYP19A1P11511 503 aaPredicted RBP18.97■□□□□ 0.63
HDHD3-201ENST00000238379 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms