RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 APAF1O14727 1248 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 KIAA1524Q8TCG1 905 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 DDX23Q9BUQ8 820 aaKnown RBP8.61□□□□□ -1.03
MED28-201ENST00000237380 CTNNA2P26232 953 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 RBM26Q5T8P6 1007 aaKnown RBP8.61□□□□□ -1.03
MED28-201ENST00000237380 CDCA7Q9BWT1 371 aaPredicted RBP8.61□□□□□ -1.03
MED28-201ENST00000237380 EYA3Q99504 573 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 TTC21BQ7Z4L5 1316 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 BLOC1S2Q6QNY1 142 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 CFAP57Q96MR6 1250 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 STK24Q9Y6E0 443 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 CD109Q6YHK3 1445 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 SPA17Q15506 151 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 SSR1P43307 286 aaKnown RBP8.61□□□□□ -1.03
MED28-201ENST00000237380 CCDC96Q2M329 555 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 SENP3-EIF4A1A0A087X0R7 540 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 PRPHP41219 470 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 FOXD4L1Q9NU39 408 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 STX6O43752 255 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 MVPQ14764 893 aaKnown RBP8.61□□□□□ -1.03
MED28-201ENST00000237380 IQGAP2Q13576 1575 aa8.61□□□□□ -1.03
MED28-201ENST00000237380 ERBINQ96RT1 1412 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 CCDC66A2RUB6 948 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 POLR3GO15318 223 aaPredicted RBP8.6□□□□□ -1.03
MED28-201ENST00000237380 EIF3DO15371 548 aaKnown RBP eCLIP8.6□□□□□ -1.03
MED28-201ENST00000237380 MYL6BP14649 208 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 CA8P35219 290 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 SLC5A4Q9NY91 659 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 THOC2Q8NI27 1593 aaKnown RBP8.6□□□□□ -1.03
MED28-201ENST00000237380 KIF2AO00139 706 aaPredicted RBP8.6□□□□□ -1.03
MED28-201ENST00000237380 TAF12Q16514 161 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 EIF4G3O43432 1585 aaKnown RBP8.6□□□□□ -1.03
MED28-201ENST00000237380 PEG3Q9GZU2 1588 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 MYCNP04198 464 aaPredicted RBP8.6□□□□□ -1.03
MED28-201ENST00000237380 CCDC152Q4G0S7 254 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 CFTRP13569 1480 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 FCHSD2O94868 740 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 PDE6BP35913 854 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 NUTM2GQ5VZR2 741 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 NAA15Q9BXJ9 866 aaKnown RBP8.6□□□□□ -1.03
MED28-201ENST00000237380 BMP15O95972 392 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 SSBP05455 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
MED28-201ENST00000237380 GNAQP50148 359 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 EIF5P55010 431 aaKnown RBP8.6□□□□□ -1.03
MED28-201ENST00000237380 C22orf23Q9BZE7 217 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 TCP11L1Q9NUJ3 509 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 KIAA1328Q86T90 577 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 TMTC2Q8N394 836 aa8.6□□□□□ -1.03
MED28-201ENST00000237380 ABCF2Q9UG63 623 aa8.59□□□□□ -1.03
MED28-201ENST00000237380 COG6Q9Y2V7 657 aa8.59□□□□□ -1.03
MED28-201ENST00000237380 PDE3AQ14432 1141 aa8.59□□□□□ -1.03
MED28-201ENST00000237380 GSE1Q14687 1217 aa8.59□□□□□ -1.03
MED28-201ENST00000237380 AMER1Q5JTC6 1135 aaPredicted RBP8.59□□□□□ -1.03
MED28-201ENST00000237380 BBXQ8WY36 941 aaPredicted RBP8.59□□□□□ -1.03
MED28-201ENST00000237380 PLB1Q6P1J6 1458 aa8.59□□□□□ -1.03
MED28-201ENST00000237380 SPATA24Q86W54 205 aa8.59□□□□□ -1.03
MED28-201ENST00000237380 ME1P48163 572 aa8.59□□□□□ -1.03
MED28-201ENST00000237380 USO1O60763 962 aaKnown RBP8.59□□□□□ -1.03
MED28-201ENST00000237380 AXDND1Q5T1B0 1012 aaPredicted RBP8.59□□□□□ -1.03
MED28-201ENST00000237380 KIF1BPQ96EK5 621 aa8.59□□□□□ -1.03
MED28-201ENST00000237380 IMPG2Q9BZV3 1241 aa8.59□□□□□ -1.03
MED28-201ENST00000237380 BRPF1P55201 1214 aaPredicted RBP8.59□□□□□ -1.03
MED28-201ENST00000237380 TROQ12816 1431 aaPredicted RBP8.59□□□□□ -1.03
MED28-201ENST00000237380 CACNA2D4Q7Z3S7 1137 aa8.59□□□□□ -1.04
MED28-201ENST00000237380 FMNL2Q96PY5 1086 aa8.59□□□□□ -1.04
MED28-201ENST00000237380 CEP135Q66GS9 1140 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 RAB3IL1Q8TBN0 382 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 SLC4A2P04920 1241 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 HACE1Q8IYU2 909 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 NAP1L4Q99733 375 aaKnown RBP8.58□□□□□ -1.04
MED28-201ENST00000237380 UQCRFS1P1P0C7P4 283 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 KMT5BQ4FZB7 885 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 CRNKL1Q9BZJ0 848 aaKnown RBP8.58□□□□□ -1.04
MED28-201ENST00000237380 DKC1O60832 514 aaKnown RBP eCLIP8.58□□□□□ -1.04
MED28-201ENST00000237380 ZNF804AQ7Z570 1209 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 TBC1D5Q92609 795 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 KCNG1Q9UIX4 513 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 FANCAO15360 1455 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 PARP3Q9Y6F1 533 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 NPHP3Q7Z494 1330 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 C6orf229H3BNL8 230 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 GOLIM4O00461 696 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 CTAGE5O15320 804 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 NSD2O96028 1365 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 GLRX3O76003 335 aaKnown RBP8.58□□□□□ -1.04
MED28-201ENST00000237380 SUPT20HQ8NEM7 779 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 SULT6B1Q6IMI4 303 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 ABCC11Q96J66 1382 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 SLC8A3P57103 927 aa8.58□□□□□ -1.04
MED28-201ENST00000237380 PRKAR2BP31323 418 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 RTEL1Q9NZ71 1219 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 RPAP2Q8IXW5 612 aaPredicted RBP8.57□□□□□ -1.04
MED28-201ENST00000237380 GGNBP2Q9H3C7 697 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 CFAP74Q9C0B2 1584 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 IDH1O75874 414 aaKnown RBP8.57□□□□□ -1.04
MED28-201ENST00000237380 CEP128Q6ZU80 1094 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 AACSQ86V21 672 aa8.57□□□□□ -1.04
MED28-201ENST00000237380 ZNF622Q969S3 477 aaKnown RBP eCLIP8.57□□□□□ -1.04
MED28-201ENST00000237380 CEP83Q9Y592 693 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms