RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 STK31Q9BXU1 1019 aa12.88□□□□□ -0.35
PRAMEF4-201ENST00000235349 CHPF2Q9P2E5 772 aa12.88□□□□□ -0.35
PRAMEF4-201ENST00000235349 ATRNO75882 1429 aa12.87□□□□□ -0.35
PRAMEF4-201ENST00000235349 MVPQ14764 893 aaKnown RBP12.87□□□□□ -0.35
PRAMEF4-201ENST00000235349 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
PRAMEF4-201ENST00000235349 ATG3Q9NT62 314 aa12.87□□□□□ -0.35
PRAMEF4-201ENST00000235349 TRPC5Q9UL62 973 aaPredicted RBP12.87□□□□□ -0.35
PRAMEF4-201ENST00000235349 UBR2Q8IWV8 1755 aa12.86□□□□□ -0.35
PRAMEF4-201ENST00000235349 F6X3S4 739 aa12.86□□□□□ -0.35
PRAMEF4-201ENST00000235349 SNRPA1P09661 255 aaKnown RBP12.86□□□□□ -0.35
PRAMEF4-201ENST00000235349 MS4A1P11836 297 aa12.86□□□□□ -0.35
PRAMEF4-201ENST00000235349 FAM182BQ5T319 152 aa12.86□□□□□ -0.35
PRAMEF4-201ENST00000235349 RGS12O14924 1447 aa12.86□□□□□ -0.35
PRAMEF4-201ENST00000235349 DOT1LQ8TEK3 1739 aa12.86□□□□□ -0.35
PRAMEF4-201ENST00000235349 KCNQ2O43526 872 aa12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 FLIIQ13045 1269 aa12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 PDIA6Q15084 440 aa12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 ITPRIPQ8IWB1 547 aa12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 API5Q9BZZ5 524 aaKnown RBP12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 PAPPAQ13219 1627 aa12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 BCL9O00512 1426 aa12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 KCPQ6ZWJ8 1503 aa12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 PIP4K2AP48426 406 aaPredicted RBP12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 ABCC4O15439 1325 aa12.85□□□□□ -0.35
PRAMEF4-201ENST00000235349 THSD7AQ9UPZ6 1657 aa12.84□□□□□ -0.35
PRAMEF4-201ENST00000235349 FBXO41Q8TF61 875 aa12.84□□□□□ -0.35
PRAMEF4-201ENST00000235349 PTPRCP08575 1304 aa12.84□□□□□ -0.35
PRAMEF4-201ENST00000235349 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.35
PRAMEF4-201ENST00000235349 DBF4Q9UBU7 674 aaPredicted RBP12.83□□□□□ -0.35
PRAMEF4-201ENST00000235349 FKBP5Q13451 457 aaPredicted RBP12.83□□□□□ -0.36
PRAMEF4-201ENST00000235349 SEPT12Q8IYM1 358 aa12.83□□□□□ -0.36
PRAMEF4-201ENST00000235349 SLC4A9Q96Q91 983 aa12.83□□□□□ -0.36
PRAMEF4-201ENST00000235349 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
PRAMEF4-201ENST00000235349 PCDHB15Q9Y5E8 787 aa12.83□□□□□ -0.36
PRAMEF4-201ENST00000235349 ZBTB7BO15156 539 aaPredicted RBP12.82□□□□□ -0.36
PRAMEF4-201ENST00000235349 MYL6BP14649 208 aa12.82□□□□□ -0.36
PRAMEF4-201ENST00000235349 INTS3Q68E01 1043 aaKnown RBP12.82□□□□□ -0.36
PRAMEF4-201ENST00000235349 SLC4A10Q6U841 1118 aa12.82□□□□□ -0.36
PRAMEF4-201ENST00000235349 DDX21Q9NR30 783 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRAMEF4-201ENST00000235349 DDX19BQ9UMR2 479 aa12.82□□□□□ -0.36
PRAMEF4-201ENST00000235349 EP400Q96L91 3159 aa12.82□□□□□ -0.36
PRAMEF4-201ENST00000235349 A1BGP04217 495 aa12.81□□□□□ -0.36
PRAMEF4-201ENST00000235349 ZBTB40Q9NUA8 1239 aa12.81□□□□□ -0.36
PRAMEF4-201ENST00000235349 BRWD3Q6RI45 1802 aa12.81□□□□□ -0.36
PRAMEF4-201ENST00000235349 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
PRAMEF4-201ENST00000235349 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
PRAMEF4-201ENST00000235349 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
PRAMEF4-201ENST00000235349 DNAJC10Q8IXB1 793 aa12.81□□□□□ -0.36
PRAMEF4-201ENST00000235349 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
PRAMEF4-201ENST00000235349 CHMP4AQ9BY43 222 aa12.81□□□□□ -0.36
PRAMEF4-201ENST00000235349 IGHDP01880 384 aa12.8□□□□□ -0.36
PRAMEF4-201ENST00000235349 AIMP1Q12904 312 aaKnown RBP12.8□□□□□ -0.36
PRAMEF4-201ENST00000235349 LRP10Q7Z4F1 713 aa12.8□□□□□ -0.36
PRAMEF4-201ENST00000235349 HYPKQ9NX55 129 aa12.8□□□□□ -0.36
PRAMEF4-201ENST00000235349 PI4KAP2A4QPH2 592 aa12.79□□□□□ -0.36
PRAMEF4-201ENST00000235349 PI4KAP1Q8N8J0 262 aa12.79□□□□□ -0.36
PRAMEF4-201ENST00000235349 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
PRAMEF4-201ENST00000235349 SBF2Q86WG5 1849 aa12.79□□□□□ -0.36
PRAMEF4-201ENST00000235349 COPS6Q7L5N1 327 aa12.78□□□□□ -0.36
PRAMEF4-201ENST00000235349 XAGE3Q8WTP9 111 aa12.78□□□□□ -0.36
PRAMEF4-201ENST00000235349 NBR1Q14596 966 aa12.78□□□□□ -0.36
PRAMEF4-201ENST00000235349 C1orf115Q9H7X2 142 aa12.78□□□□□ -0.36
PRAMEF4-201ENST00000235349 RGS17Q9UGC6 210 aaPredicted RBP12.78□□□□□ -0.36
PRAMEF4-201ENST00000235349 ADCY9O60503 1353 aa12.78□□□□□ -0.36
PRAMEF4-201ENST00000235349 ZNF772Q68DY9 489 aaPredicted RBP12.77□□□□□ -0.37
PRAMEF4-201ENST00000235349 VSIG10Q8N0Z9 540 aa12.77□□□□□ -0.37
PRAMEF4-201ENST00000235349 MAP3K2Q9Y2U5 619 aa12.77□□□□□ -0.37
PRAMEF4-201ENST00000235349 AAMPQ13685 434 aa12.76□□□□□ -0.37
PRAMEF4-201ENST00000235349 KSR2Q6VAB6 950 aa12.76□□□□□ -0.37
PRAMEF4-201ENST00000235349 DNAAF4Q8WXU2 420 aa12.76□□□□□ -0.37
PRAMEF4-201ENST00000235349 MEIS3Q99687 375 aa12.76□□□□□ -0.37
PRAMEF4-201ENST00000235349 KDM2BQ8NHM5 1336 aa12.76□□□□□ -0.37
PRAMEF4-201ENST00000235349 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
PRAMEF4-201ENST00000235349 CCT4P50991 539 aaKnown RBP12.76□□□□□ -0.37
PRAMEF4-201ENST00000235349 RBM6P78332 1123 aaKnown RBP12.76□□□□□ -0.37
PRAMEF4-201ENST00000235349 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
PRAMEF4-201ENST00000235349 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
PRAMEF4-201ENST00000235349 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
PRAMEF4-201ENST00000235349 BTAF1O14981 1849 aa12.75□□□□□ -0.37
PRAMEF4-201ENST00000235349 KCNQ4P56696 695 aa12.75□□□□□ -0.37
PRAMEF4-201ENST00000235349 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
PRAMEF4-201ENST00000235349 TEX13AQ9BXU3 409 aaPredicted RBP12.75□□□□□ -0.37
PRAMEF4-201ENST00000235349 TJP1Q07157 1748 aa12.75□□□□□ -0.37
PRAMEF4-201ENST00000235349 LOC102724428A0A0B4J2F2 783 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 SIK1P57059 783 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 ITPK1Q13572 414 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 DDRGK1Q96HY6 314 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 PALLDQ8WX93 1383 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 STARD3NLO95772 234 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 POTEAQ6S8J7 498 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 KRT27Q7Z3Y8 459 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 RIC3Q7Z5B4 369 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 USP44Q9H0E7 712 aa12.74□□□□□ -0.37
PRAMEF4-201ENST00000235349 SMARCC1Q92922 1105 aaPredicted RBP12.73□□□□□ -0.37
PRAMEF4-201ENST00000235349 SRCIN1Q9C0H9 1055 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms