RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 GNAI2P04899 355 aa12.19□□□□□ -0.46
MDH1-201ENST00000233114 SOX12O15370 315 aa12.18□□□□□ -0.46
MDH1-201ENST00000233114 FOXO3O43524 673 aa12.18□□□□□ -0.46
MDH1-201ENST00000233114 REC8O95072 547 aa12.18□□□□□ -0.46
MDH1-201ENST00000233114 HOXB7P09629 217 aa12.18□□□□□ -0.46
MDH1-201ENST00000233114 RAB3GAP1Q15042 981 aa12.18□□□□□ -0.46
MDH1-201ENST00000233114 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
MDH1-201ENST00000233114 IL27Q8NEV9 243 aa12.18□□□□□ -0.46
MDH1-201ENST00000233114 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.18□□□□□ -0.46
MDH1-201ENST00000233114 LMTK3Q96Q04 1460 aa12.17□□□□□ -0.46
MDH1-201ENST00000233114 FLIIQ13045 1269 aa12.17□□□□□ -0.46
MDH1-201ENST00000233114 CLEC17AQ6ZS10 378 aa12.17□□□□□ -0.46
MDH1-201ENST00000233114 PHF8Q9UPP1 1060 aa12.17□□□□□ -0.46
MDH1-201ENST00000233114 CEMIPQ8WUJ3 1361 aa12.17□□□□□ -0.46
MDH1-201ENST00000233114 AOX1Q06278 1338 aa12.17□□□□□ -0.46
MDH1-201ENST00000233114 OVOS2A0A0G2JMS6 1433 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 FSD2A1L4K1 749 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 SKOR2Q2VWA4 1001 aaPredicted RBP12.16□□□□□ -0.46
MDH1-201ENST00000233114 ABTB2Q8N961 1025 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 IP6K1Q92551 441 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 TUBGCP6Q96RT7 1819 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 LMO7Q8WWI1 1683 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 G2E3Q7L622 706 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 ANKLE2Q86XL3 938 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 KCNH5Q8NCM2 988 aa12.16□□□□□ -0.46
MDH1-201ENST00000233114 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
MDH1-201ENST00000233114 TRAK2O60296 914 aa12.15□□□□□ -0.46
MDH1-201ENST00000233114 HSP90AA1P07900 732 aaKnown RBP12.15□□□□□ -0.46
MDH1-201ENST00000233114 SDSP20132 328 aa12.15□□□□□ -0.46
MDH1-201ENST00000233114 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
MDH1-201ENST00000233114 SRCIN1Q9C0H9 1055 aa12.15□□□□□ -0.46
MDH1-201ENST00000233114 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.46
MDH1-201ENST00000233114 GOLGA6L3A6NEY3 463 aa12.14□□□□□ -0.47
MDH1-201ENST00000233114 SNPHO15079 494 aa12.14□□□□□ -0.47
MDH1-201ENST00000233114 EPB41L2O43491 1005 aaKnown RBP12.14□□□□□ -0.47
MDH1-201ENST00000233114 ATP8B2P98198 1209 aa12.14□□□□□ -0.47
MDH1-201ENST00000233114 IL17REQ8NFR9 667 aa12.14□□□□□ -0.47
MDH1-201ENST00000233114 TMEM121BQ9BXQ6 578 aaPredicted RBP12.14□□□□□ -0.47
MDH1-201ENST00000233114 MIS18AQ9NYP9 233 aa12.14□□□□□ -0.47
MDH1-201ENST00000233114 CAMTA1Q9Y6Y1 1673 aa12.14□□□□□ -0.47
MDH1-201ENST00000233114 SALL3Q9BXA9 1300 aa12.14□□□□□ -0.47
MDH1-201ENST00000233114 SLIT3O75094 1523 aa12.14□□□□□ -0.47
MDH1-201ENST00000233114 ERC2O15083 957 aa12.13□□□□□ -0.47
MDH1-201ENST00000233114 PDE1AP54750 535 aa12.13□□□□□ -0.47
MDH1-201ENST00000233114 FKBP5Q13451 457 aaPredicted RBP12.13□□□□□ -0.47
MDH1-201ENST00000233114 SLC4A10Q6U841 1118 aa12.13□□□□□ -0.47
MDH1-201ENST00000233114 TNPO1Q92973 898 aaKnown RBP12.13□□□□□ -0.47
MDH1-201ENST00000233114 IBTKQ9P2D0 1353 aaPredicted RBP12.13□□□□□ -0.47
MDH1-201ENST00000233114 C16orf71Q8IYS4 520 aaPredicted RBP12.13□□□□□ -0.47
MDH1-201ENST00000233114 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
MDH1-201ENST00000233114 CWC22Q9HCG8 908 aaKnown RBP12.13□□□□□ -0.47
MDH1-201ENST00000233114 STAP2Q9UGK3 403 aa12.13□□□□□ -0.47
MDH1-201ENST00000233114 SETD1BQ9UPS6 1966 aaKnown RBP12.12□□□□□ -0.47
MDH1-201ENST00000233114 F6X3S4 739 aa12.12□□□□□ -0.47
MDH1-201ENST00000233114 GOLGA6L22H0YM25 854 aa12.12□□□□□ -0.47
MDH1-201ENST00000233114 NUCB2P80303 420 aa12.12□□□□□ -0.47
MDH1-201ENST00000233114 ZNF467Q7Z7K2 595 aaPredicted RBP12.12□□□□□ -0.47
MDH1-201ENST00000233114 OTUD7AQ8TE49 926 aaPredicted RBP12.12□□□□□ -0.47
MDH1-201ENST00000233114 ADAMTSL3P82987 1691 aa12.12□□□□□ -0.47
MDH1-201ENST00000233114 SMARCA5O60264 1052 aaPredicted RBP12.11□□□□□ -0.47
MDH1-201ENST00000233114 RAB11FIP3O75154 756 aa12.11□□□□□ -0.47
MDH1-201ENST00000233114 CD2BP2O95400 341 aaKnown RBP12.11□□□□□ -0.47
MDH1-201ENST00000233114 FAM43AQ8N2R8 423 aa12.11□□□□□ -0.47
MDH1-201ENST00000233114 IL17RAQ96F46 866 aa12.11□□□□□ -0.47
MDH1-201ENST00000233114 KIF1AQ12756 1690 aa12.11□□□□□ -0.47
MDH1-201ENST00000233114 MST1RQ04912 1400 aa12.11□□□□□ -0.47
MDH1-201ENST00000233114 MCM2P49736 904 aa12.1□□□□□ -0.47
MDH1-201ENST00000233114 MRE11P49959 708 aa12.1□□□□□ -0.47
MDH1-201ENST00000233114 AMOTQ4VCS5 1084 aa12.1□□□□□ -0.47
MDH1-201ENST00000233114 HDGFL1Q5TGJ6 251 aa12.1□□□□□ -0.47
MDH1-201ENST00000233114 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
MDH1-201ENST00000233114 MX1P20591 662 aa12.1□□□□□ -0.47
MDH1-201ENST00000233114 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
MDH1-201ENST00000233114 ANAPC15P60006 121 aa12.1□□□□□ -0.47
MDH1-201ENST00000233114 AKAP4Q5JQC9 854 aa12.1□□□□□ -0.47
MDH1-201ENST00000233114 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
MDH1-201ENST00000233114 SSH3Q8TE77 659 aa12.1□□□□□ -0.47
MDH1-201ENST00000233114 MCCP23508 829 aa12.09□□□□□ -0.47
MDH1-201ENST00000233114 PLEKHO1Q53GL0 409 aaPredicted RBP12.09□□□□□ -0.47
MDH1-201ENST00000233114 PLEKHG2Q9H7P9 1386 aa12.08□□□□□ -0.48
MDH1-201ENST00000233114 NPHP4O75161 1426 aaPredicted RBP12.08□□□□□ -0.48
MDH1-201ENST00000233114 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
MDH1-201ENST00000233114 EIF4A1P60842 406 aaKnown RBP12.08□□□□□ -0.48
MDH1-201ENST00000233114 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
MDH1-201ENST00000233114 USP44Q9H0E7 712 aa12.08□□□□□ -0.48
MDH1-201ENST00000233114 HDAC5Q9UQL6 1122 aa12.08□□□□□ -0.48
MDH1-201ENST00000233114 TRPM3Q9HCF6 1732 aaPredicted RBP12.07□□□□□ -0.48
MDH1-201ENST00000233114 ABCC6O95255 1503 aa12.07□□□□□ -0.48
MDH1-201ENST00000233114 CYP2E1P05181 493 aaPredicted RBP12.07□□□□□ -0.48
MDH1-201ENST00000233114 PSME1Q06323 249 aa12.07□□□□□ -0.48
MDH1-201ENST00000233114 HSP90AB4PQ58FF6 505 aa12.07□□□□□ -0.48
MDH1-201ENST00000233114 NUTM2GQ5VZR2 741 aa12.07□□□□□ -0.48
MDH1-201ENST00000233114 ESYT1Q9BSJ8 1104 aa12.07□□□□□ -0.48
MDH1-201ENST00000233114 PNMA6EA0A0J9YXQ4 647 aa12.06□□□□□ -0.48
MDH1-201ENST00000233114 APBB1O00213 710 aa12.06□□□□□ -0.48
MDH1-201ENST00000233114 NBPF6Q5VWK0 638 aa12.06□□□□□ -0.48
MDH1-201ENST00000233114 C3orf67Q6ZVT6 689 aa12.06□□□□□ -0.48
MDH1-201ENST00000233114 MARVELD3Q96A59 401 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms