RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 RNF214Q8ND24 703 aa11.51□□□□□ -0.57
HLA-DOA-201ENST00000229829 KIF24Q5T7B8 1368 aa11.5□□□□□ -0.57
HLA-DOA-201ENST00000229829 OFD1O75665 1012 aa11.5□□□□□ -0.57
HLA-DOA-201ENST00000229829 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
HLA-DOA-201ENST00000229829 CCDC173Q0VFZ6 552 aa11.5□□□□□ -0.57
HLA-DOA-201ENST00000229829 THEMISQ8N1K5 641 aaPredicted RBP11.5□□□□□ -0.57
HLA-DOA-201ENST00000229829 MAP7D2Q96T17 732 aa11.5□□□□□ -0.57
HLA-DOA-201ENST00000229829 ISY1Q9ULR0 285 aaKnown RBP11.5□□□□□ -0.57
HLA-DOA-201ENST00000229829 CAVIN1Q6NZI2 390 aaKnown RBP11.49□□□□□ -0.57
HLA-DOA-201ENST00000229829 KCNA6P17658 529 aa11.49□□□□□ -0.57
HLA-DOA-201ENST00000229829 CLEC17AQ6ZS10 378 aa11.49□□□□□ -0.57
HLA-DOA-201ENST00000229829 MTHFSDQ2M296 383 aaKnown RBP11.48□□□□□ -0.57
HLA-DOA-201ENST00000229829 KLHL40Q2TBA0 621 aa11.48□□□□□ -0.57
HLA-DOA-201ENST00000229829 NAP1L2Q9ULW6 460 aaPredicted RBP11.48□□□□□ -0.57
HLA-DOA-201ENST00000229829 EXOC6BQ9Y2D4 811 aa11.48□□□□□ -0.57
HLA-DOA-201ENST00000229829 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
HLA-DOA-201ENST00000229829 SIPA1L3O60292 1781 aaPredicted RBP11.48□□□□□ -0.57
HLA-DOA-201ENST00000229829 MAP3K19Q56UN5 1328 aa11.48□□□□□ -0.57
HLA-DOA-201ENST00000229829 CYP2E1P05181 493 aaPredicted RBP11.48□□□□□ -0.57
HLA-DOA-201ENST00000229829 NECTIN2Q92692 538 aa11.48□□□□□ -0.57
HLA-DOA-201ENST00000229829 SBNO1A3KN83 1393 aa11.48□□□□□ -0.57
HLA-DOA-201ENST00000229829 CRB1P82279 1406 aa11.47□□□□□ -0.57
HLA-DOA-201ENST00000229829 LMBRD1Q9NUN5 540 aa11.47□□□□□ -0.57
HLA-DOA-201ENST00000229829 ZDHHC9Q9Y397 364 aa11.47□□□□□ -0.57
HLA-DOA-201ENST00000229829 SLIT2O94813 1529 aa11.47□□□□□ -0.57
HLA-DOA-201ENST00000229829 PTPRCP08575 1304 aa11.47□□□□□ -0.57
HLA-DOA-201ENST00000229829 LTN1O94822 1766 aa11.47□□□□□ -0.57
HLA-DOA-201ENST00000229829 TSPYL4Q9UJ04 414 aa11.47□□□□□ -0.57
HLA-DOA-201ENST00000229829 KIAA0232Q92628 1395 aa11.47□□□□□ -0.57
HLA-DOA-201ENST00000229829 PDIA4P13667 645 aaKnown RBP11.47□□□□□ -0.57
HLA-DOA-201ENST00000229829 PDE1AP54750 535 aa11.46□□□□□ -0.57
HLA-DOA-201ENST00000229829 PRPF40AO75400 957 aaKnown RBP11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 PTMSP20962 102 aa11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 NUCB2P80303 420 aa11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 FOXD4L6Q3SYB3 417 aaPredicted RBP11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 FOXD4L3Q6VB84 417 aaPredicted RBP11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 CGNQ9P2M7 1197 aaKnown RBP11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 RBM27Q9P2N5 1060 aaKnown RBP11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 ERC2O15083 957 aa11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 CASC1Q6TDU7 716 aa11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 ESF1Q9H501 851 aaKnown RBP11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 OVOS2A0A0J9YW53 1432 aa11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 OVOS2Q6IE36 1432 aa11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 ST18O60284 1047 aa11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 ZSCAN23Q3MJ62 389 aa11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 SMAP1Q8IYB5 467 aaPredicted RBP11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 SLC26A8Q96RN1 970 aa11.45□□□□□ -0.58
HLA-DOA-201ENST00000229829 PNMA6EA0A0J9YXQ4 647 aa11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 NSFL1CQ9UNZ2 370 aaKnown RBP11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 C1orf167Q5SNV9 1468 aa11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 ATRNO75882 1429 aa11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 REC8O95072 547 aa11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 LTKP29376 864 aa11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 NEK4P51957 841 aa11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 NOL8Q76FK4 1167 aaKnown RBP11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 GPT2Q8TD30 523 aa11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 RTF1Q92541 710 aaKnown RBP11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 PALD1Q9ULE6 856 aa11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 KIF13BQ9NQT8 1826 aa11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 ZNF771Q7L3S4 317 aaPredicted RBP11.44□□□□□ -0.58
HLA-DOA-201ENST00000229829 HMMRO75330 724 aa11.43□□□□□ -0.58
HLA-DOA-201ENST00000229829 USP6P35125 1406 aa11.43□□□□□ -0.58
HLA-DOA-201ENST00000229829 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
HLA-DOA-201ENST00000229829 PPP4R3BQ5MIZ7 849 aa11.43□□□□□ -0.58
HLA-DOA-201ENST00000229829 EYA1Q99502 592 aa11.43□□□□□ -0.58
HLA-DOA-201ENST00000229829 RBSNQ9H1K0 784 aa11.43□□□□□ -0.58
HLA-DOA-201ENST00000229829 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
HLA-DOA-201ENST00000229829 GNAI2P04899 355 aa11.42□□□□□ -0.58
HLA-DOA-201ENST00000229829 PPP1R9BQ96SB3 815 aa11.42□□□□□ -0.58
HLA-DOA-201ENST00000229829 OSBPL3Q9H4L5 887 aa11.42□□□□□ -0.58
HLA-DOA-201ENST00000229829 CCT4P50991 539 aaKnown RBP11.42□□□□□ -0.58
HLA-DOA-201ENST00000229829 FKBP5Q13451 457 aaPredicted RBP11.42□□□□□ -0.58
HLA-DOA-201ENST00000229829 UNC5CLQ8IV45 518 aa11.42□□□□□ -0.58
HLA-DOA-201ENST00000229829 RILPL2Q969X0 211 aa11.42□□□□□ -0.58
HLA-DOA-201ENST00000229829 TMX3Q96JJ7 454 aa11.42□□□□□ -0.58
HLA-DOA-201ENST00000229829 CHMP4AQ9BY43 222 aa11.42□□□□□ -0.58
HLA-DOA-201ENST00000229829 CWC22Q9HCG8 908 aaKnown RBP11.42□□□□□ -0.58
HLA-DOA-201ENST00000229829 ZNF445P59923 1031 aa11.41□□□□□ -0.58
HLA-DOA-201ENST00000229829 NUTM2GQ5VZR2 741 aa11.41□□□□□ -0.58
HLA-DOA-201ENST00000229829 SALL3Q9BXA9 1300 aa11.41□□□□□ -0.58
HLA-DOA-201ENST00000229829 HDGFP51858 240 aaKnown RBP11.41□□□□□ -0.58
HLA-DOA-201ENST00000229829 FLIIQ13045 1269 aa11.41□□□□□ -0.58
HLA-DOA-201ENST00000229829 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
HLA-DOA-201ENST00000229829 IL25Q9H293 177 aa11.41□□□□□ -0.58
HLA-DOA-201ENST00000229829 IBTKQ9P2D0 1353 aaPredicted RBP11.41□□□□□ -0.58
HLA-DOA-201ENST00000229829 TRIM6-TRIM34B2RNG4 842 aa11.41□□□□□ -0.58
HLA-DOA-201ENST00000229829 USP31Q70CQ4 1352 aa11.4□□□□□ -0.58
HLA-DOA-201ENST00000229829 GTF2E1P29083 439 aaPredicted RBP11.4□□□□□ -0.58
HLA-DOA-201ENST00000229829 ZNF830Q96NB3 372 aaPredicted RBP11.4□□□□□ -0.58
HLA-DOA-201ENST00000229829 ESYT1Q9BSJ8 1104 aa11.4□□□□□ -0.58
HLA-DOA-201ENST00000229829 LRRCC1Q9C099 1032 aa11.4□□□□□ -0.58
HLA-DOA-201ENST00000229829 TMEM63CQ9P1W3 806 aa11.4□□□□□ -0.58
HLA-DOA-201ENST00000229829 MX1P20591 662 aa11.4□□□□□ -0.58
HLA-DOA-201ENST00000229829 AMPHP49418 695 aa11.4□□□□□ -0.58
HLA-DOA-201ENST00000229829 STK31Q9BXU1 1019 aa11.4□□□□□ -0.58
HLA-DOA-201ENST00000229829 ANO2Q9NQ90 1003 aa11.4□□□□□ -0.58
HLA-DOA-201ENST00000229829 UPF3BQ9BZI7 483 aaKnown RBP11.4□□□□□ -0.59
HLA-DOA-201ENST00000229829 IL1RAPL2Q9NP60 686 aa11.4□□□□□ -0.59
HLA-DOA-201ENST00000229829 LRRFIP2Q9Y608 721 aaKnown RBP11.4□□□□□ -0.59
HLA-DOA-201ENST00000229829 UBR2Q8IWV8 1755 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms