RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 APPP05067 770 aa16.28■□□□□ 0.2
RAB3D-201ENST00000222120 NBPF6Q5VWK0 638 aa16.28■□□□□ 0.2
RAB3D-201ENST00000222120 NBPF4Q96M43 638 aa16.28■□□□□ 0.2
RAB3D-201ENST00000222120 TSPY26PQ9H489 355 aa16.28■□□□□ 0.2
RAB3D-201ENST00000222120 RTL1A6NKG5 1358 aa16.28■□□□□ 0.2
RAB3D-201ENST00000222120 LARP1BQ659C4 914 aaKnown RBP16.28■□□□□ 0.2
RAB3D-201ENST00000222120 CHMLP26374 656 aa16.28■□□□□ 0.2
RAB3D-201ENST00000222120 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
RAB3D-201ENST00000222120 AMOTQ4VCS5 1084 aa16.28■□□□□ 0.2
RAB3D-201ENST00000222120 BCL11BQ9C0K0 894 aaPredicted RBP16.28■□□□□ 0.2
RAB3D-201ENST00000222120 FAM13BQ9NYF5 915 aa16.28■□□□□ 0.2
RAB3D-201ENST00000222120 CHAF1AQ13111 956 aaPredicted RBP16.27■□□□□ 0.2
RAB3D-201ENST00000222120 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
RAB3D-201ENST00000222120 PRDM11Q9NQV5 511 aa16.27■□□□□ 0.2
RAB3D-201ENST00000222120 GCP02774 474 aa16.27■□□□□ 0.19
RAB3D-201ENST00000222120 BLOC1S2Q6QNY1 142 aa16.27■□□□□ 0.19
RAB3D-201ENST00000222120 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.19
RAB3D-201ENST00000222120 ISY1Q9ULR0 285 aaKnown RBP16.27■□□□□ 0.19
RAB3D-201ENST00000222120 ARHGAP31Q2M1Z3 1444 aa16.26■□□□□ 0.19
RAB3D-201ENST00000222120 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
RAB3D-201ENST00000222120 PSMA5P28066 241 aa16.26■□□□□ 0.19
RAB3D-201ENST00000222120 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
RAB3D-201ENST00000222120 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
RAB3D-201ENST00000222120 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
RAB3D-201ENST00000222120 UBE3BQ7Z3V4 1068 aa16.25■□□□□ 0.19
RAB3D-201ENST00000222120 CFAP74Q9C0B2 1584 aa16.25■□□□□ 0.19
RAB3D-201ENST00000222120 ZSCAN23Q3MJ62 389 aa16.25■□□□□ 0.19
RAB3D-201ENST00000222120 NECAB1Q8N987 351 aa16.25■□□□□ 0.19
RAB3D-201ENST00000222120 RRAGDQ9NQL2 400 aaPredicted RBP16.25■□□□□ 0.19
RAB3D-201ENST00000222120 USP44Q9H0E7 712 aa16.25■□□□□ 0.19
RAB3D-201ENST00000222120 KLHDC4Q8TBB5 520 aa16.24■□□□□ 0.19
RAB3D-201ENST00000222120 LARP1Q6PKG0 1096 aaKnown RBP16.24■□□□□ 0.19
RAB3D-201ENST00000222120 COPS6Q7L5N1 327 aa16.24■□□□□ 0.19
RAB3D-201ENST00000222120 AATKQ6ZMQ8 1374 aa16.24■□□□□ 0.19
RAB3D-201ENST00000222120 FKBP4Q02790 459 aaKnown RBP eCLIP16.24■□□□□ 0.19
RAB3D-201ENST00000222120 SPC24Q8NBT2 197 aa16.24■□□□□ 0.19
RAB3D-201ENST00000222120 A2ML1A8K2U0 1454 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 NFATC2IPQ8NCF5 419 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 PNPLA6Q8IY17 1366 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 A0A087WZG4 1122 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 XAGE3Q8WTP9 111 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 LIMCH1Q9UPQ0 1083 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
RAB3D-201ENST00000222120 LMTK2Q8IWU2 1503 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 BRPF1P55201 1214 aaPredicted RBP16.23■□□□□ 0.19
RAB3D-201ENST00000222120 IP6K1Q92551 441 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 SETBP1Q9Y6X0 1596 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 ATP7BP35670 1465 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
RAB3D-201ENST00000222120 ADGRB1O14514 1584 aa16.22■□□□□ 0.19
RAB3D-201ENST00000222120 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
RAB3D-201ENST00000222120 DDX17Q92841 729 aaKnown RBP16.22■□□□□ 0.19
RAB3D-201ENST00000222120 HYPKQ9NX55 129 aa16.22■□□□□ 0.19
RAB3D-201ENST00000222120 PALD1Q9ULE6 856 aa16.22■□□□□ 0.19
RAB3D-201ENST00000222120 CPLX1O14810 134 aa16.22■□□□□ 0.19
RAB3D-201ENST00000222120 CAMK4Q16566 473 aa16.22■□□□□ 0.19
RAB3D-201ENST00000222120 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
RAB3D-201ENST00000222120 UNC5CLQ8IV45 518 aa16.22■□□□□ 0.19
RAB3D-201ENST00000222120 ZBTB3Q9H5J0 574 aa16.22■□□□□ 0.19
RAB3D-201ENST00000222120 BECN2A8MW95 431 aa16.21■□□□□ 0.19
RAB3D-201ENST00000222120 RBM10P98175 930 aaKnown RBP16.21■□□□□ 0.19
RAB3D-201ENST00000222120 KIF3AQ9Y496 699 aa16.21■□□□□ 0.19
RAB3D-201ENST00000222120 HIP1O00291 1037 aa16.21■□□□□ 0.19
RAB3D-201ENST00000222120 TFIP11Q9UBB9 837 aaKnown RBP16.21■□□□□ 0.19
RAB3D-201ENST00000222120 PTPRMP28827 1452 aa16.21■□□□□ 0.19
RAB3D-201ENST00000222120 GAS2L3Q86XJ1 694 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 GOLGA6L19H0YKK7 550 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 SIRT1Q96EB6 747 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 MROH2AA6NES4 1674 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 LRRC7Q96NW7 1537 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 KIAA0232Q92628 1395 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 GRM8O00222 908 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 KSR2Q6VAB6 950 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 NEXMIFQ5QGS0 1516 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 NRXN1Q9ULB1 1477 aa16.2■□□□□ 0.18
RAB3D-201ENST00000222120 GOLGA6L6A8MZA4 724 aa16.19■□□□□ 0.18
RAB3D-201ENST00000222120 GJB2P29033 226 aa16.19■□□□□ 0.18
RAB3D-201ENST00000222120 STK11IPQ8N1F8 1099 aa16.19■□□□□ 0.18
RAB3D-201ENST00000222120 STX6O43752 255 aa16.19■□□□□ 0.18
RAB3D-201ENST00000222120 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
RAB3D-201ENST00000222120 LRRC2Q9BYS8 371 aa16.19■□□□□ 0.18
RAB3D-201ENST00000222120 CNPY2Q9Y2B0 182 aa16.19■□□□□ 0.18
RAB3D-201ENST00000222120 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
RAB3D-201ENST00000222120 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.18■□□□□ 0.18
RAB3D-201ENST00000222120 ANKRD13DQ6ZTN6 518 aa16.18■□□□□ 0.18
RAB3D-201ENST00000222120 CCDC39Q9UFE4 941 aa16.18■□□□□ 0.18
RAB3D-201ENST00000222120 IQSEC2Q5JU85 1478 aa16.18■□□□□ 0.18
RAB3D-201ENST00000222120 RNMTO43148 476 aaKnown RBP16.18■□□□□ 0.18
RAB3D-201ENST00000222120 PDCP20941 246 aa16.18■□□□□ 0.18
RAB3D-201ENST00000222120 SASS6Q6UVJ0 657 aa16.18■□□□□ 0.18
RAB3D-201ENST00000222120 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
RAB3D-201ENST00000222120 NDUFB9Q9Y6M9 179 aa16.18■□□□□ 0.18
RAB3D-201ENST00000222120 USP6P35125 1406 aa16.18■□□□□ 0.18
RAB3D-201ENST00000222120 AK2P54819 239 aa16.18■□□□□ 0.18
RAB3D-201ENST00000222120 KRT85P78386 507 aa16.18■□□□□ 0.18
RAB3D-201ENST00000222120 EIF4A1P60842 406 aaKnown RBP16.17■□□□□ 0.18
RAB3D-201ENST00000222120 SNRKQ9NRH2 765 aa16.17■□□□□ 0.18
RAB3D-201ENST00000222120 EVI5LQ96CN4 794 aa16.17■□□□□ 0.18
RAB3D-201ENST00000222120 USP25Q9UHP3 1055 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms