RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 PRDM10Q9NQV6 1147 aa10.98□□□□□ -0.65
MTHFD1-201ENST00000216605 SOS1Q07889 1333 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-201ENST00000216605 TMED8Q6PL24 325 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-201ENST00000216605 EXOC6BQ9Y2D4 811 aa10.98□□□□□ -0.65
MTHFD1-201ENST00000216605 PXDNQ92626 1479 aa10.98□□□□□ -0.65
MTHFD1-201ENST00000216605 C9orf78Q9NZ63 289 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-201ENST00000216605 LRRFIP2Q9Y608 721 aaKnown RBP10.98□□□□□ -0.65
MTHFD1-201ENST00000216605 BECN1Q14457 450 aa10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 ZNF790Q6PG37 636 aa10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 C16orf71Q8IYS4 520 aaPredicted RBP10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 DNAAF4Q8WXU2 420 aa10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 DCTPP1Q9H773 170 aa10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 SLC52A2Q9HAB3 445 aa10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 MED1Q15648 1581 aaPredicted RBP10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 HSP90AB1P08238 724 aaKnown RBP10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 TEX2Q8IWB9 1127 aa10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 ZNF592Q92610 1267 aa10.97□□□□□ -0.65
MTHFD1-201ENST00000216605 TRPM3Q9HCF6 1732 aaPredicted RBP10.96□□□□□ -0.65
MTHFD1-201ENST00000216605 USP54Q70EL1 1684 aa10.96□□□□□ -0.65
MTHFD1-201ENST00000216605 ZCRB1Q8TBF4 217 aaKnown RBP10.96□□□□□ -0.65
MTHFD1-201ENST00000216605 DCAF5Q96JK2 942 aa10.96□□□□□ -0.65
MTHFD1-201ENST00000216605 DDX58O95786 925 aaKnown RBP10.96□□□□□ -0.66
MTHFD1-201ENST00000216605 HOXB7P09629 217 aa10.96□□□□□ -0.66
MTHFD1-201ENST00000216605 PIP4K2AP48426 406 aaPredicted RBP10.96□□□□□ -0.66
MTHFD1-201ENST00000216605 OS9Q13438 667 aaPredicted RBP10.96□□□□□ -0.66
MTHFD1-201ENST00000216605 RIC3Q7Z5B4 369 aa10.96□□□□□ -0.66
MTHFD1-201ENST00000216605 SOS2Q07890 1332 aaPredicted RBP10.96□□□□□ -0.66
MTHFD1-201ENST00000216605 RGS12O14924 1447 aa10.96□□□□□ -0.66
MTHFD1-201ENST00000216605 CYP27B1O15528 508 aa10.95□□□□□ -0.66
MTHFD1-201ENST00000216605 LARP1Q6PKG0 1096 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-201ENST00000216605 MAP3K2Q9Y2U5 619 aa10.95□□□□□ -0.66
MTHFD1-201ENST00000216605 NCLP19338 710 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-201ENST00000216605 PROSER3Q2NL68 480 aa10.95□□□□□ -0.66
MTHFD1-201ENST00000216605 ZNF330Q9Y3S2 320 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-201ENST00000216605 RGPD5Q99666 1765 aa10.95□□□□□ -0.66
MTHFD1-201ENST00000216605 PIP4K2BP78356 416 aa10.95□□□□□ -0.66
MTHFD1-201ENST00000216605 WDR17Q8IZU2 1322 aa10.95□□□□□ -0.66
MTHFD1-201ENST00000216605 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-201ENST00000216605 IL2RBP14784 551 aa10.94□□□□□ -0.66
MTHFD1-201ENST00000216605 L1TD1Q5T7N2 865 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-201ENST00000216605 ZNF496Q96IT1 587 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-201ENST00000216605 C22orf23Q9BZE7 217 aa10.94□□□□□ -0.66
MTHFD1-201ENST00000216605 BTG4Q9NY30 223 aa10.94□□□□□ -0.66
MTHFD1-201ENST00000216605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.94□□□□□ -0.664e-7■■□□□ 12.7
MTHFD1-201ENST00000216605 NCAPD2Q15021 1401 aa10.94□□□□□ -0.66
MTHFD1-201ENST00000216605 USP44Q9H0E7 712 aa10.94□□□□□ -0.66
MTHFD1-201ENST00000216605 HYPKQ9NX55 129 aa10.94□□□□□ -0.66
MTHFD1-201ENST00000216605 NPM3O75607 178 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 SURF6O75683 361 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 FMNL2Q96PY5 1086 aa10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 MEGF6O75095 1541 aa10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 PNMA6EA0A0J9YXQ4 647 aa10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 SRGAP3O43295 1099 aa10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 NEXNQ0ZGT2 675 aa10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 SPRYD3Q8NCJ5 442 aa10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 OTUD7AQ8TE49 926 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 NUTM2BA6NNL0 878 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 NUTM2EB1AL46 878 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 BMP2KLQ5H9B9 411 aa10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 NUTM2AQ8IVF1 878 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 ZNF526Q8TF50 670 aaPredicted RBP10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 ALS2Q96Q42 1657 aa10.93□□□□□ -0.66
MTHFD1-201ENST00000216605 KAT6BQ8WYB5 2073 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 SNRPA1P09661 255 aaKnown RBP10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 NBPF7P0C2Y1 421 aaPredicted RBP10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 ATP8B2P98198 1209 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 CWF19L2Q2TBE0 894 aaKnown RBP10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 PLEKHM2Q8IWE5 1019 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 LRRCC1Q9C099 1032 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 CPDO75976 1380 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 PCDH11XQ9BZA7 1347 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 PCDH11YQ9BZA8 1340 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 CASC1Q6TDU7 716 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 KSR2Q6VAB6 950 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 PPP1R42Q7Z4L9 355 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 SYTL4Q96C24 671 aaPredicted RBP10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 IL1RAPL2Q9NP60 686 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 DDX21Q9NR30 783 aaKnown RBP eCLIP10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 USP16Q9Y5T5 823 aa10.92□□□□□ -0.66
MTHFD1-201ENST00000216605 COPS6Q7L5N1 327 aa10.91□□□□□ -0.66
MTHFD1-201ENST00000216605 TRIM6-TRIM34B2RNG4 842 aa10.91□□□□□ -0.66
MTHFD1-201ENST00000216605 XAGE3Q8WTP9 111 aa10.91□□□□□ -0.66
MTHFD1-201ENST00000216605 CDC45O75419 566 aa10.91□□□□□ -0.66
MTHFD1-201ENST00000216605 BEND3Q5T5X7 828 aa10.91□□□□□ -0.66
MTHFD1-201ENST00000216605 TSHZ3Q63HK5 1081 aa10.91□□□□□ -0.66
MTHFD1-201ENST00000216605 TBC1D32Q96NH3 1257 aa10.91□□□□□ -0.66
MTHFD1-201ENST00000216605 CARD10Q9BWT7 1032 aa10.91□□□□□ -0.66
MTHFD1-201ENST00000216605 SLKQ9H2G2 1235 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-201ENST00000216605 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
MTHFD1-201ENST00000216605 SECISBP2LQ93073 1101 aaKnown RBP10.9□□□□□ -0.66
MTHFD1-201ENST00000216605 RILPL2Q969X0 211 aa10.9□□□□□ -0.66
MTHFD1-201ENST00000216605 ATP10DQ9P241 1426 aa10.9□□□□□ -0.66
MTHFD1-201ENST00000216605 TBC1D9Q6ZT07 1266 aa10.9□□□□□ -0.66
MTHFD1-201ENST00000216605 MYD88Q99836 296 aa10.9□□□□□ -0.66
MTHFD1-201ENST00000216605 HDAC5Q9UQL6 1122 aa10.9□□□□□ -0.66
MTHFD1-201ENST00000216605 PHRF1Q9P1Y6 1649 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-201ENST00000216605 KDM6AO15550 1401 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms