RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 IL17REQ8NFR9 667 aa20.15■□□□□ 0.82
UPK3A-201ENST00000216211 POLRMTO00411 1230 aaKnown RBP20.14■□□□□ 0.81
UPK3A-201ENST00000216211 KCNA3P22001 575 aa20.14■□□□□ 0.81
UPK3A-201ENST00000216211 TM4SF1P30408 202 aa20.14■□□□□ 0.81
UPK3A-201ENST00000216211 TTC5Q8N0Z6 440 aa20.14■□□□□ 0.81
UPK3A-201ENST00000216211 CFAP53Q96M91 514 aa20.14■□□□□ 0.81
UPK3A-201ENST00000216211 NRXN2Q9P2S2 1712 aa20.13■□□□□ 0.81
UPK3A-201ENST00000216211 FCHSD2O94868 740 aa20.13■□□□□ 0.81
UPK3A-201ENST00000216211 TEFQ10587 303 aa20.13■□□□□ 0.81
UPK3A-201ENST00000216211 PRKAR2BP31323 418 aa20.12■□□□□ 0.81
UPK3A-201ENST00000216211 ARHGAP27Q6ZUM4 889 aa20.12■□□□□ 0.81
UPK3A-201ENST00000216211 PHACTR3Q96KR7 559 aa20.12■□□□□ 0.81
UPK3A-201ENST00000216211 NARFQ9UHQ1 456 aa20.12■□□□□ 0.81
UPK3A-201ENST00000216211 CANXP27824 592 aaKnown RBP20.11■□□□□ 0.81
UPK3A-201ENST00000216211 PPP2R1AP30153 589 aa20.11■□□□□ 0.81
UPK3A-201ENST00000216211 RSPH6AQ9H0K4 717 aa20.11■□□□□ 0.81
UPK3A-201ENST00000216211 ZNF790Q6PG37 636 aa20.1■□□□□ 0.81
UPK3A-201ENST00000216211 ZNF496Q96IT1 587 aaPredicted RBP20.1■□□□□ 0.81
UPK3A-201ENST00000216211 PIM2Q9P1W9 311 aa20.1■□□□□ 0.81
UPK3A-201ENST00000216211 DLEC1Q9Y238 1755 aa20.1■□□□□ 0.81
UPK3A-201ENST00000216211 HEG1Q9ULI3 1381 aa20.09■□□□□ 0.81
UPK3A-201ENST00000216211 CHRNA5P30532 468 aa20.09■□□□□ 0.81
UPK3A-201ENST00000216211 NFIXQ14938 502 aa20.09■□□□□ 0.81
UPK3A-201ENST00000216211 BCL2L12Q9HB09 334 aa20.09■□□□□ 0.81
UPK3A-201ENST00000216211 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
UPK3A-201ENST00000216211 SCN7AQ01118 1682 aa20.09■□□□□ 0.81
UPK3A-201ENST00000216211 CEMIPQ8WUJ3 1361 aa20.08■□□□□ 0.81
UPK3A-201ENST00000216211 SBF1O95248 1867 aa20.08■□□□□ 0.81
UPK3A-201ENST00000216211 STARD3NLO95772 234 aa20.08■□□□□ 0.81
UPK3A-201ENST00000216211 U2AF1L5P0DN76 240 aaPredicted RBP20.07■□□□□ 0.8
UPK3A-201ENST00000216211 U2AF1Q01081 240 aaKnown RBP eCLIP20.07■□□□□ 0.8
UPK3A-201ENST00000216211 EIF5P55010 431 aaKnown RBP20.06■□□□□ 0.8
UPK3A-201ENST00000216211 DALRD3Q5D0E6 543 aaKnown RBP20.06■□□□□ 0.8
UPK3A-201ENST00000216211 DLG5Q8TDM6 1919 aa20.06■□□□□ 0.8
UPK3A-201ENST00000216211 BTBD11A6QL63 1104 aa20.05■□□□□ 0.8
UPK3A-201ENST00000216211 KCNQ3O43525 872 aa20.05■□□□□ 0.8
UPK3A-201ENST00000216211 SERPINB2P05120 415 aa20.05■□□□□ 0.8
UPK3A-201ENST00000216211 FMNL2Q96PY5 1086 aa20.05■□□□□ 0.8
UPK3A-201ENST00000216211 TEX13AQ9BXU3 409 aaPredicted RBP20.05■□□□□ 0.8
UPK3A-201ENST00000216211 ANKRD31Q8N7Z5 1873 aa20.05■□□□□ 0.8
UPK3A-201ENST00000216211 CEP350Q5VT06 3117 aa20.04■□□□□ 0.8
UPK3A-201ENST00000216211 BCORQ6W2J9 1755 aa20.04■□□□□ 0.8
UPK3A-201ENST00000216211 A0A087WZG4 1122 aa20.04■□□□□ 0.8
UPK3A-201ENST00000216211 KIF3CO14782 793 aa20.04■□□□□ 0.8
UPK3A-201ENST00000216211 BICDL1Q6ZP65 573 aa20.04■□□□□ 0.8
UPK3A-201ENST00000216211 ZNF330Q9Y3S2 320 aaPredicted RBP20.04■□□□□ 0.8
UPK3A-201ENST00000216211 CCDC88AQ3V6T2 1871 aa20.03■□□□□ 0.8
UPK3A-201ENST00000216211 A1BGP04217 495 aa20.02■□□□□ 0.8
UPK3A-201ENST00000216211 C9orf131Q5VYM1 1079 aa20.02■□□□□ 0.8
UPK3A-201ENST00000216211 MCM10Q7L590 875 aa20.02■□□□□ 0.8
UPK3A-201ENST00000216211 TBC1D2BQ9UPU7 963 aa20.02■□□□□ 0.8
UPK3A-201ENST00000216211 CARMIL3Q8ND23 1372 aa20.01■□□□□ 0.79
UPK3A-201ENST00000216211 RTF1Q92541 710 aaKnown RBP20.01■□□□□ 0.79
UPK3A-201ENST00000216211 IL6STP40189 918 aaPredicted RBP20■□□□□ 0.79
UPK3A-201ENST00000216211 DCTN1Q14203 1278 aa20■□□□□ 0.79
UPK3A-201ENST00000216211 TBC1D9BQ66K14 1250 aa20■□□□□ 0.79
UPK3A-201ENST00000216211 CACNA1SQ13698 1873 aa20■□□□□ 0.79
UPK3A-201ENST00000216211 COL11A2P13942 1736 aaPredicted RBP19.99■□□□□ 0.79
UPK3A-201ENST00000216211 PRAMEF22A3QJZ6 481 aa19.98■□□□□ 0.79
UPK3A-201ENST00000216211 RNF181Q9P0P0 153 aa19.98■□□□□ 0.79
UPK3A-201ENST00000216211 USP16Q9Y5T5 823 aa19.98■□□□□ 0.79
UPK3A-201ENST00000216211 HSPA6P17066 643 aa19.97■□□□□ 0.79
UPK3A-201ENST00000216211 PIP4K2AP48426 406 aaPredicted RBP19.97■□□□□ 0.79
UPK3A-201ENST00000216211 C2CD5Q86YS7 1000 aa19.97■□□□□ 0.79
UPK3A-201ENST00000216211 NMRK2Q9NPI5 230 aa19.97■□□□□ 0.79
UPK3A-201ENST00000216211 LAMB4A4D0S4 1761 aa19.96■□□□□ 0.79
UPK3A-201ENST00000216211 RASSF7Q02833 373 aa19.96■□□□□ 0.79
UPK3A-201ENST00000216211 NPM2Q86SE8 214 aaKnown RBP19.96■□□□□ 0.79
UPK3A-201ENST00000216211 KDM3BQ7LBC6 1761 aa19.95■□□□□ 0.78
UPK3A-201ENST00000216211 H0YIN7 160 aa19.95■□□□□ 0.78
UPK3A-201ENST00000216211 HTATSF1O43719 755 aaKnown RBP19.95■□□□□ 0.78
UPK3A-201ENST00000216211 CAMTA2O94983 1202 aa19.95■□□□□ 0.78
UPK3A-201ENST00000216211 CCDC24Q8N4L8 307 aa19.95■□□□□ 0.78
UPK3A-201ENST00000216211 TTLL6Q8N841 843 aa19.95■□□□□ 0.78
UPK3A-201ENST00000216211 TIAM2Q8IVF5 1701 aa19.95■□□□□ 0.78
UPK3A-201ENST00000216211 TNRC6CQ9HCJ0 1690 aaKnown RBP19.94■□□□□ 0.78
UPK3A-201ENST00000216211 PRR5LQ6MZQ0 368 aa19.94■□□□□ 0.78
UPK3A-201ENST00000216211 DZIP3Q86Y13 1208 aaKnown RBP19.94■□□□□ 0.78
UPK3A-201ENST00000216211 SNRPA1P09661 255 aaKnown RBP19.93■□□□□ 0.78
UPK3A-201ENST00000216211 TOMM70O94826 608 aa19.92■□□□□ 0.78
UPK3A-201ENST00000216211 ZNF622Q969S3 477 aaKnown RBP eCLIP19.92■□□□□ 0.78
UPK3A-201ENST00000216211 SETDB2Q96T68 719 aa19.92■□□□□ 0.78
UPK3A-201ENST00000216211 ARFGEF2Q9Y6D5 1785 aa19.92■□□□□ 0.78
UPK3A-201ENST00000216211 FER1L6Q2WGJ9 1857 aa19.92■□□□□ 0.78
UPK3A-201ENST00000216211 NEFMP07197 916 aa19.91■□□□□ 0.78
UPK3A-201ENST00000216211 PDE6BP35913 854 aa19.91■□□□□ 0.78
UPK3A-201ENST00000216211 TAF7Q15545 349 aaPredicted RBP19.91■□□□□ 0.78
UPK3A-201ENST00000216211 BRIP1Q9BX63 1249 aa19.91■□□□□ 0.78
UPK3A-201ENST00000216211 MIS18AQ9NYP9 233 aa19.91■□□□□ 0.78
UPK3A-201ENST00000216211 DICER1Q9UPY3 1922 aaKnown RBP19.9■□□□□ 0.78
UPK3A-201ENST00000216211 PRELPP51888 382 aa19.9■□□□□ 0.78
UPK3A-201ENST00000216211 PLEKHF1Q96S99 279 aa19.9■□□□□ 0.78
UPK3A-201ENST00000216211 KDM2BQ8NHM5 1336 aa19.9■□□□□ 0.78
UPK3A-201ENST00000216211 SLX4Q8IY92 1834 aa19.9■□□□□ 0.78
UPK3A-201ENST00000216211 NBPF26B4DH59 902 aa19.89■□□□□ 0.77
UPK3A-201ENST00000216211 NPHP1O15259 732 aa19.89■□□□□ 0.77
UPK3A-201ENST00000216211 NBPF10Q6P3W6 841 aaKnown RBP19.89■□□□□ 0.77
UPK3A-201ENST00000216211 NBPF15Q8N660 670 aa19.89■□□□□ 0.77
UPK3A-201ENST00000216211 CNBD1Q8NA66 436 aa19.89■□□□□ 0.77
UPK3A-201ENST00000216211 ZNF219Q9P2Y4 722 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms