RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
EFNB1-201ENST00000204961 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
EFNB1-201ENST00000204961 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
EFNB1-201ENST00000204961 USP48Q86UV5 1035 aa18.25■□□□□ 0.51
EFNB1-201ENST00000204961 BOLA2Q9H3K6 86 aa18.25■□□□□ 0.51
EFNB1-201ENST00000204961 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
EFNB1-201ENST00000204961 USP32Q8NFA0 1604 aa18.25■□□□□ 0.51
EFNB1-201ENST00000204961 CDK12Q9NYV4 1490 aaPredicted RBP18.25■□□□□ 0.51
EFNB1-201ENST00000204961 NCOA3Q9Y6Q9 1424 aa18.24■□□□□ 0.51
EFNB1-201ENST00000204961 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
EFNB1-201ENST00000204961 LARGE1O95461 756 aa18.24■□□□□ 0.51
EFNB1-201ENST00000204961 CCDC173Q0VFZ6 552 aa18.24■□□□□ 0.51
EFNB1-201ENST00000204961 JAKMIP1Q96N16 626 aaKnown RBP18.24■□□□□ 0.51
EFNB1-201ENST00000204961 A0A0U1RQG5 324 aaPredicted RBP18.23■□□□□ 0.51
EFNB1-201ENST00000204961 RRP9O43818 475 aaKnown RBP18.23■□□□□ 0.51
EFNB1-201ENST00000204961 USP25Q9UHP3 1055 aa18.23■□□□□ 0.51
EFNB1-201ENST00000204961 CFAP74Q9C0B2 1584 aa18.23■□□□□ 0.51
EFNB1-201ENST00000204961 AATKQ6ZMQ8 1374 aa18.23■□□□□ 0.51
EFNB1-201ENST00000204961 KNDC1Q76NI1 1749 aa18.23■□□□□ 0.51
EFNB1-201ENST00000204961 TMEM2Q9UHN6 1383 aa18.23■□□□□ 0.51
EFNB1-201ENST00000204961 CAMK4Q16566 473 aa18.23■□□□□ 0.51
EFNB1-201ENST00000204961 MAP3K2Q9Y2U5 619 aa18.23■□□□□ 0.51
EFNB1-201ENST00000204961 CEBPZQ03701 1054 aaKnown RBP18.22■□□□□ 0.51
EFNB1-201ENST00000204961 AACSQ86V21 672 aa18.22■□□□□ 0.51
EFNB1-201ENST00000204961 SPC24Q8NBT2 197 aa18.22■□□□□ 0.51
EFNB1-201ENST00000204961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.22■□□□□ 0.51
EFNB1-201ENST00000204961 IFIT2P09913 472 aaKnown RBP18.22■□□□□ 0.51
EFNB1-201ENST00000204961 AK2P54819 239 aa18.22■□□□□ 0.51
EFNB1-201ENST00000204961 ADCK5Q3MIX3 580 aa18.22■□□□□ 0.51
EFNB1-201ENST00000204961 PLEKHG3A1L390 1219 aa18.21■□□□□ 0.51
EFNB1-201ENST00000204961 KDM4AO75164 1064 aa18.21■□□□□ 0.51
EFNB1-201ENST00000204961 PTH1RQ03431 593 aa18.21■□□□□ 0.51
EFNB1-201ENST00000204961 ZSCAN30Q86W11 494 aa18.21■□□□□ 0.51
EFNB1-201ENST00000204961 CRB1P82279 1406 aa18.21■□□□□ 0.51
EFNB1-201ENST00000204961 HCLS1P14317 486 aaPredicted RBP18.21■□□□□ 0.51
EFNB1-201ENST00000204961 GIMAP6Q6P9H5 292 aa18.21■□□□□ 0.51
EFNB1-201ENST00000204961 ORAI2Q96SN7 254 aa18.21■□□□□ 0.51
EFNB1-201ENST00000204961 FLT4P35916 1363 aa18.21■□□□□ 0.51
EFNB1-201ENST00000204961 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
EFNB1-201ENST00000204961 LRRC2Q9BYS8 371 aa18.21■□□□□ 0.51
EFNB1-201ENST00000204961 USP6P35125 1406 aa18.2■□□□□ 0.5
EFNB1-201ENST00000204961 KIF20BQ96Q89 1820 aa18.2■□□□□ 0.5
EFNB1-201ENST00000204961 CWC22Q9HCG8 908 aaKnown RBP18.2■□□□□ 0.5
EFNB1-201ENST00000204961 TFIP11Q9UBB9 837 aaKnown RBP18.2■□□□□ 0.5
EFNB1-201ENST00000204961 SMC3Q9UQE7 1217 aa18.2■□□□□ 0.5
EFNB1-201ENST00000204961 FAM227BQ96M60 508 aa18.2■□□□□ 0.5
EFNB1-201ENST00000204961 SLFNL1Q499Z3 407 aa18.19■□□□□ 0.5
EFNB1-201ENST00000204961 CCDC85AQ96PX6 553 aaPredicted RBP18.19■□□□□ 0.5
EFNB1-201ENST00000204961 CABLES1Q8TDN4 633 aa18.19■□□□□ 0.5
EFNB1-201ENST00000204961 TTC12Q9H892 705 aaPredicted RBP18.19■□□□□ 0.5
EFNB1-201ENST00000204961 TLR7Q9NYK1 1049 aaKnown RBP18.18■□□□□ 0.5
EFNB1-201ENST00000204961 ATP5J2-PTCD1G3V325 749 aa18.18■□□□□ 0.5
EFNB1-201ENST00000204961 PTCD1O75127 700 aaKnown RBP18.18■□□□□ 0.5
EFNB1-201ENST00000204961 DNM1Q05193 864 aaKnown RBP18.18■□□□□ 0.5
EFNB1-201ENST00000204961 C1orf141Q5JVX7 400 aa18.17■□□□□ 0.5
EFNB1-201ENST00000204961 CLASRPQ8N2M8 674 aaKnown RBP18.17■□□□□ 0.5
EFNB1-201ENST00000204961 NLRP2Q9NX02 1062 aa18.17■□□□□ 0.5
EFNB1-201ENST00000204961 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
EFNB1-201ENST00000204961 SNX14Q9Y5W7 946 aa18.17■□□□□ 0.5
EFNB1-201ENST00000204961 CEP170BQ9Y4F5 1589 aaPredicted RBP18.17■□□□□ 0.5
EFNB1-201ENST00000204961 CYP2E1P05181 493 aaPredicted RBP18.17■□□□□ 0.5
EFNB1-201ENST00000204961 CSB-PGBD3P0DP91 1061 aa18.17■□□□□ 0.5
EFNB1-201ENST00000204961 TAF6LQ9Y6J9 622 aa18.17■□□□□ 0.5
EFNB1-201ENST00000204961 RICTORQ6R327 1708 aa18.16■□□□□ 0.5
EFNB1-201ENST00000204961 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
EFNB1-201ENST00000204961 DLC1Q96QB1 1528 aa18.16■□□□□ 0.5
EFNB1-201ENST00000204961 CNTROBQ8N137 903 aa18.16■□□□□ 0.5
EFNB1-201ENST00000204961 A0A0G2JS52 829 aa18.16■□□□□ 0.5
EFNB1-201ENST00000204961 RIC3Q7Z5B4 369 aa18.16■□□□□ 0.5
EFNB1-201ENST00000204961 DNAJC2Q99543 621 aaKnown RBP18.16■□□□□ 0.5
EFNB1-201ENST00000204961 TSPY26PQ9H489 355 aa18.16■□□□□ 0.5
EFNB1-201ENST00000204961 PODXL2Q9NZ53 605 aa18.16■□□□□ 0.5
EFNB1-201ENST00000204961 LRSAM1Q6UWE0 723 aa18.15■□□□□ 0.5
EFNB1-201ENST00000204961 KIAA0232Q92628 1395 aa18.15■□□□□ 0.5
EFNB1-201ENST00000204961 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
EFNB1-201ENST00000204961 FGD1P98174 961 aa18.15■□□□□ 0.5
EFNB1-201ENST00000204961 IGSF1Q8N6C5 1336 aa18.15■□□□□ 0.5
EFNB1-201ENST00000204961 SYT1P21579 422 aa18.15■□□□□ 0.5
EFNB1-201ENST00000204961 FSD1Q9BTV5 496 aa18.15■□□□□ 0.5
EFNB1-201ENST00000204961 BRD1O95696 1058 aa18.14■□□□□ 0.49
EFNB1-201ENST00000204961 PTMSP20962 102 aa18.14■□□□□ 0.49
EFNB1-201ENST00000204961 GJB2P29033 226 aa18.14■□□□□ 0.49
EFNB1-201ENST00000204961 CHRNA2Q15822 529 aa18.14■□□□□ 0.49
EFNB1-201ENST00000204961 RUFY3Q7L099 469 aa18.14■□□□□ 0.49
EFNB1-201ENST00000204961 CKAP2LQ8IYA6 745 aa18.14■□□□□ 0.49
EFNB1-201ENST00000204961 KIF1BPQ96EK5 621 aa18.14■□□□□ 0.49
EFNB1-201ENST00000204961 IBTKQ9P2D0 1353 aaPredicted RBP18.13■□□□□ 0.49
EFNB1-201ENST00000204961 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
EFNB1-201ENST00000204961 SBNO1A3KN83 1393 aa18.13■□□□□ 0.49
EFNB1-201ENST00000204961 CCDC129Q6ZRS4 1044 aa18.13■□□□□ 0.49
EFNB1-201ENST00000204961 MAP3K5Q99683 1374 aa18.13■□□□□ 0.49
EFNB1-201ENST00000204961 A0A087WWV3 80 aa18.13■□□□□ 0.49
EFNB1-201ENST00000204961 PDRG1Q9NUG6 133 aa18.13■□□□□ 0.49
EFNB1-201ENST00000204961 ZNF445P59923 1031 aa18.12■□□□□ 0.49
EFNB1-201ENST00000204961 PI4K2BQ8TCG2 481 aa18.12■□□□□ 0.49
EFNB1-201ENST00000204961 G3BP1Q13283 466 aaKnown RBP eCLIP18.11■□□□□ 0.49
EFNB1-201ENST00000204961 RAB11FIP4Q86YS3 637 aa18.11■□□□□ 0.49
EFNB1-201ENST00000204961 KAT6BQ8WYB5 2073 aa18.11■□□□□ 0.49
EFNB1-201ENST00000204961 SGSM2O43147 1006 aa18.11■□□□□ 0.49
EFNB1-201ENST00000204961 STX6O43752 255 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms