RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 HSPA2P54652 639 aa22.26■■□□□ 1.15
SLC22A4-201ENST00000200652 STAP2Q9UGK3 403 aa22.26■■□□□ 1.15
SLC22A4-201ENST00000200652 TATP17735 454 aaPredicted RBP22.25■■□□□ 1.15
SLC22A4-201ENST00000200652 RABEP1Q15276 862 aa22.25■■□□□ 1.15
SLC22A4-201ENST00000200652 ERC2O15083 957 aa22.24■■□□□ 1.15
SLC22A4-201ENST00000200652 RAB11FIP3O75154 756 aa22.24■■□□□ 1.15
SLC22A4-201ENST00000200652 REC8O95072 547 aa22.24■■□□□ 1.15
SLC22A4-201ENST00000200652 KDM6AO15550 1401 aaPredicted RBP22.24■■□□□ 1.15
SLC22A4-201ENST00000200652 MEGF6O75095 1541 aa22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 PHKG2P15735 406 aa22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 MCM4P33991 863 aa22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 MAP3K2Q9Y2U5 619 aa22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 SPATA31A3Q5VYP0 1347 aa22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 SRGAP3O43295 1099 aa22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 SURF6O75683 361 aaKnown RBP22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 KSR2Q6VAB6 950 aa22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 ABCC6O95255 1503 aa22.23■■□□□ 1.15
SLC22A4-201ENST00000200652 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
SLC22A4-201ENST00000200652 CSB-PGBD3P0DP91 1061 aa22.22■■□□□ 1.15
SLC22A4-201ENST00000200652 CHRNA2Q15822 529 aa22.22■■□□□ 1.15
SLC22A4-201ENST00000200652 SLC52A2Q9HAB3 445 aa22.22■■□□□ 1.15
SLC22A4-201ENST00000200652 IL1RAPL2Q9NP60 686 aa22.22■■□□□ 1.15
SLC22A4-201ENST00000200652 HYPKQ9NX55 129 aa22.22■■□□□ 1.15
SLC22A4-201ENST00000200652 CIZ1Q9ULV3 898 aaPredicted RBP22.22■■□□□ 1.15
SLC22A4-201ENST00000200652 ALDH1L1O75891 902 aa22.21■■□□□ 1.15
SLC22A4-201ENST00000200652 ZNF790Q6PG37 636 aa22.21■■□□□ 1.15
SLC22A4-201ENST00000200652 SLC39A6Q13433 755 aa22.21■■□□□ 1.15
SLC22A4-201ENST00000200652 AOX1Q06278 1338 aa22.2■■□□□ 1.14
SLC22A4-201ENST00000200652 RHPN1Q8TCX5 695 aa22.2■■□□□ 1.14
SLC22A4-201ENST00000200652 DDX21Q9NR30 783 aaKnown RBP eCLIP22.2■■□□□ 1.14
SLC22A4-201ENST00000200652 IFNL2Q8IZJ0 200 aa22.19■■□□□ 1.14
SLC22A4-201ENST00000200652 HSP90AA1P07900 732 aaKnown RBP22.19■■□□□ 1.14
SLC22A4-201ENST00000200652 PDIA6Q15084 440 aa22.19■■□□□ 1.14
SLC22A4-201ENST00000200652 NFATC2IPQ8NCF5 419 aa22.19■■□□□ 1.14
SLC22A4-201ENST00000200652 C5P01031 1676 aa22.18■■□□□ 1.14
SLC22A4-201ENST00000200652 TRIM6-TRIM34B2RNG4 842 aa22.18■■□□□ 1.14
SLC22A4-201ENST00000200652 NUTM1Q86Y26 1132 aa22.18■■□□□ 1.14
SLC22A4-201ENST00000200652 RILPL2Q969X0 211 aa22.18■■□□□ 1.14
SLC22A4-201ENST00000200652 KIF1BPQ96EK5 621 aa22.18■■□□□ 1.14
SLC22A4-201ENST00000200652 ESYT1Q9BSJ8 1104 aa22.18■■□□□ 1.14
SLC22A4-201ENST00000200652 FOXD4L1Q9NU39 408 aa22.18■■□□□ 1.14
SLC22A4-201ENST00000200652 CPDO75976 1380 aa22.17■■□□□ 1.14
SLC22A4-201ENST00000200652 MTX1Q13505 466 aa22.17■■□□□ 1.14
SLC22A4-201ENST00000200652 C9orf78Q9NZ63 289 aaPredicted RBP22.17■■□□□ 1.14
SLC22A4-201ENST00000200652 PLEKHG2Q9H7P9 1386 aa22.17■■□□□ 1.14
SLC22A4-201ENST00000200652 CHMLP26374 656 aa22.16■■□□□ 1.14
SLC22A4-201ENST00000200652 CWF19L2Q2TBE0 894 aaKnown RBP22.16■■□□□ 1.14
SLC22A4-201ENST00000200652 PKD1L3Q7Z443 1732 aa22.16■■□□□ 1.14
SLC22A4-201ENST00000200652 UNC5CLQ8IV45 518 aa22.16■■□□□ 1.14
SLC22A4-201ENST00000200652 CYP27B1O15528 508 aa22.15■■□□□ 1.14
SLC22A4-201ENST00000200652 DDX58O95786 925 aaKnown RBP22.15■■□□□ 1.14
SLC22A4-201ENST00000200652 BRINP3Q76B58 766 aa22.15■■□□□ 1.14
SLC22A4-201ENST00000200652 RAB3GAP1Q15042 981 aa22.15■■□□□ 1.14
SLC22A4-201ENST00000200652 HSP90AB4PQ58FF6 505 aa22.15■■□□□ 1.14
SLC22A4-201ENST00000200652 LINS1Q8NG48 757 aa22.15■■□□□ 1.14
SLC22A4-201ENST00000200652 AIMP1Q12904 312 aaKnown RBP22.14■■□□□ 1.14
SLC22A4-201ENST00000200652 TNPO1Q92973 898 aaKnown RBP22.14■■□□□ 1.14
SLC22A4-201ENST00000200652 DCAF5Q96JK2 942 aa22.14■■□□□ 1.14
SLC22A4-201ENST00000200652 MRC1P22897 1456 aa22.14■■□□□ 1.13
SLC22A4-201ENST00000200652 PI4K2BQ8TCG2 481 aa22.13■■□□□ 1.13
SLC22A4-201ENST00000200652 ZNF496Q96IT1 587 aaPredicted RBP22.13■■□□□ 1.13
SLC22A4-201ENST00000200652 HDAC5Q9UQL6 1122 aa22.13■■□□□ 1.13
SLC22A4-201ENST00000200652 UTYO14607 1347 aa22.12■■□□□ 1.13
SLC22A4-201ENST00000200652 GRM8O00222 908 aa22.11■■□□□ 1.13
SLC22A4-201ENST00000200652 AK9Q5TCS8 1911 aa22.11■■□□□ 1.13
SLC22A4-201ENST00000200652 ST18O60284 1047 aa22.11■■□□□ 1.13
SLC22A4-201ENST00000200652 MYL6BP14649 208 aa22.1■■□□□ 1.13
SLC22A4-201ENST00000200652 STRCQ7RTU9 1775 aa22.1■■□□□ 1.13
SLC22A4-201ENST00000200652 DDX11L8A8MPP1 907 aa22.1■■□□□ 1.13
SLC22A4-201ENST00000200652 RIC3Q7Z5B4 369 aa22.1■■□□□ 1.13
SLC22A4-201ENST00000200652 IGKV5-2P06315 115 aa22.09■■□□□ 1.13
SLC22A4-201ENST00000200652 OS9Q13438 667 aaPredicted RBP22.09■■□□□ 1.13
SLC22A4-201ENST00000200652 LARP1Q6PKG0 1096 aaKnown RBP22.09■■□□□ 1.13
SLC22A4-201ENST00000200652 KAZALD1Q96I82 304 aa22.09■■□□□ 1.13
SLC22A4-201ENST00000200652 SUCLG2Q96I99 432 aa22.09■■□□□ 1.13
SLC22A4-201ENST00000200652 TRAK2O60296 914 aa22.08■■□□□ 1.13
SLC22A4-201ENST00000200652 SNRPA1P09661 255 aaKnown RBP22.08■■□□□ 1.13
SLC22A4-201ENST00000200652 TTC5Q8N0Z6 440 aa22.08■■□□□ 1.13
SLC22A4-201ENST00000200652 XAGE3Q8WTP9 111 aa22.08■■□□□ 1.13
SLC22A4-201ENST00000200652 USP16Q9Y5T5 823 aa22.08■■□□□ 1.13
SLC22A4-201ENST00000200652 MAP4K4O95819 1239 aaPredicted RBP22.08■■□□□ 1.13
SLC22A4-201ENST00000200652 ANO2Q9NQ90 1003 aa22.08■■□□□ 1.13
SLC22A4-201ENST00000200652 USP42Q9H9J4 1324 aaKnown RBP22.08■■□□□ 1.12
SLC22A4-201ENST00000200652 COPS6Q7L5N1 327 aa22.07■■□□□ 1.12
SLC22A4-201ENST00000200652 PA2G4Q9UQ80 394 aaKnown RBP22.07■■□□□ 1.12
SLC22A4-201ENST00000200652 LRP10Q7Z4F1 713 aa22.07■■□□□ 1.12
SLC22A4-201ENST00000200652 GBP4Q96PP9 640 aa22.07■■□□□ 1.12
SLC22A4-201ENST00000200652 SOS2Q07890 1332 aaPredicted RBP22.06■■□□□ 1.12
SLC22A4-201ENST00000200652 MCCP23508 829 aa22.06■■□□□ 1.12
SLC22A4-201ENST00000200652 CABP4P57796 275 aa22.06■■□□□ 1.12
SLC22A4-201ENST00000200652 FMNL2Q96PY5 1086 aa22.06■■□□□ 1.12
SLC22A4-201ENST00000200652 BICC1Q9H694 974 aaKnown RBP22.06■■□□□ 1.12
SLC22A4-201ENST00000200652 TTC41PQ6P2S7 1318 aa22.06■■□□□ 1.12
SLC22A4-201ENST00000200652 CLASRPQ8N2M8 674 aaKnown RBP22.06■■□□□ 1.12
SLC22A4-201ENST00000200652 IL25Q9H293 177 aa22.06■■□□□ 1.12
SLC22A4-201ENST00000200652 PRDM11Q9NQV5 511 aa22.06■■□□□ 1.12
SLC22A4-201ENST00000200652 SLAIN2Q9P270 581 aa22.06■■□□□ 1.12
SLC22A4-201ENST00000200652 WDR17Q8IZU2 1322 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms