RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 GNAI2P04899 355 aa11.92□□□□□ -0.5
CLDN18-201ENST00000183605 SKILP12757 684 aa11.92□□□□□ -0.5
CLDN18-201ENST00000183605 DACT1Q9NYF0 836 aa11.92□□□□□ -0.5
CLDN18-201ENST00000183605 CEBPZQ03701 1054 aaKnown RBP11.92□□□□□ -0.5
CLDN18-201ENST00000183605 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
CLDN18-201ENST00000183605 SPATA32Q96LK8 384 aa11.92□□□□□ -0.5
CLDN18-201ENST00000183605 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
CLDN18-201ENST00000183605 CHMLP26374 656 aa11.91□□□□□ -0.5
CLDN18-201ENST00000183605 AEBP2Q6ZN18 517 aaPredicted RBP11.91□□□□□ -0.5
CLDN18-201ENST00000183605 CCAR2Q8N163 923 aaKnown RBP11.91□□□□□ -0.5
CLDN18-201ENST00000183605 DNAJC25Q9H1X3 360 aa11.91□□□□□ -0.5
CLDN18-201ENST00000183605 NSD2O96028 1365 aa11.91□□□□□ -0.5
CLDN18-201ENST00000183605 IQSEC2Q5JU85 1478 aa11.91□□□□□ -0.5
CLDN18-201ENST00000183605 CPA1P15085 419 aa11.91□□□□□ -0.5
CLDN18-201ENST00000183605 TAF7LQ5H9L4 462 aa11.91□□□□□ -0.5
CLDN18-201ENST00000183605 FAM173BQ6P4H8 233 aa11.91□□□□□ -0.5
CLDN18-201ENST00000183605 CWC27Q6UX04 472 aaKnown RBP11.91□□□□□ -0.5
CLDN18-201ENST00000183605 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
CLDN18-201ENST00000183605 ZFP91Q96JP5 570 aaPredicted RBP11.91□□□□□ -0.5
CLDN18-201ENST00000183605 JAKMIP1Q96N16 626 aaKnown RBP11.91□□□□□ -0.5
CLDN18-201ENST00000183605 SLU7O95391 586 aaKnown RBP11.91□□□□□ -0.5
CLDN18-201ENST00000183605 AK2P54819 239 aa11.91□□□□□ -0.5
CLDN18-201ENST00000183605 ZKSCAN1P17029 563 aaPredicted RBP11.9□□□□□ -0.5
CLDN18-201ENST00000183605 TPM4P67936 248 aa11.9□□□□□ -0.5
CLDN18-201ENST00000183605 TMCO3Q6UWJ1 677 aa11.9□□□□□ -0.5
CLDN18-201ENST00000183605 CBX8Q9HC52 389 aa11.9□□□□□ -0.5
CLDN18-201ENST00000183605 H3BQV1 296 aa11.9□□□□□ -0.5
CLDN18-201ENST00000183605 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
CLDN18-201ENST00000183605 UBXN4Q92575 508 aa11.9□□□□□ -0.5
CLDN18-201ENST00000183605 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
CLDN18-201ENST00000183605 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
CLDN18-201ENST00000183605 MORC2Q9Y6X9 1032 aaPredicted RBP11.9□□□□□ -0.5
CLDN18-201ENST00000183605 MADDQ8WXG6 1647 aa11.9□□□□□ -0.5
CLDN18-201ENST00000183605 CCDC171Q6TFL3 1326 aa11.9□□□□□ -0.51
CLDN18-201ENST00000183605 ZNF75DP51815 510 aa11.9□□□□□ -0.51
CLDN18-201ENST00000183605 NECAB1Q8N987 351 aa11.9□□□□□ -0.51
CLDN18-201ENST00000183605 ST7Q9NRC1 585 aa11.9□□□□□ -0.51
CLDN18-201ENST00000183605 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
CLDN18-201ENST00000183605 FOSBP53539 338 aa11.89□□□□□ -0.51
CLDN18-201ENST00000183605 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
CLDN18-201ENST00000183605 TAOK2Q9UL54 1235 aa11.89□□□□□ -0.51
CLDN18-201ENST00000183605 SURF6O75683 361 aaKnown RBP11.89□□□□□ -0.51
CLDN18-201ENST00000183605 ERO1AQ96HE7 468 aa11.89□□□□□ -0.51
CLDN18-201ENST00000183605 FMNL2Q96PY5 1086 aa11.89□□□□□ -0.51
CLDN18-201ENST00000183605 CYP46A1Q9Y6A2 500 aa11.89□□□□□ -0.51
CLDN18-201ENST00000183605 AP5Z1O43299 807 aa11.89□□□□□ -0.51
CLDN18-201ENST00000183605 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
CLDN18-201ENST00000183605 GOLGA6L1Q8N7Z2 621 aa11.89□□□□□ -0.51
CLDN18-201ENST00000183605 CACTINQ8WUQ7 758 aaKnown RBP11.89□□□□□ -0.51
CLDN18-201ENST00000183605 SYTL4Q96C24 671 aaPredicted RBP11.89□□□□□ -0.51
CLDN18-201ENST00000183605 CWC15Q9P013 229 aaKnown RBP11.89□□□□□ -0.51
CLDN18-201ENST00000183605 DUOX2Q9NRD8 1548 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 STK3Q13188 491 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 SYCP1Q15431 976 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 RNF20Q5VTR2 975 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 FBXO38Q6PIJ6 1188 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 C10orf67Q8IYJ2 551 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 TMX1Q9H3N1 280 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 C14orf93Q9H972 538 aaKnown RBP11.88□□□□□ -0.51
CLDN18-201ENST00000183605 MIS18AQ9NYP9 233 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 FANCAO15360 1455 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 TRAPPC8Q9Y2L5 1435 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 PDCP20941 246 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 EMILIN1Q9Y6C2 1016 aa11.88□□□□□ -0.51
CLDN18-201ENST00000183605 SMC2O95347 1197 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 HSP90B1P14625 803 aaKnown RBP11.87□□□□□ -0.51
CLDN18-201ENST00000183605 LIG1P18858 919 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 HNRNPH2P55795 449 aaKnown RBP11.87□□□□□ -0.51
CLDN18-201ENST00000183605 FAM177A1Q8N128 213 aaPredicted RBP11.87□□□□□ -0.51
CLDN18-201ENST00000183605 C3P01024 1663 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
CLDN18-201ENST00000183605 SNW1Q13573 536 aaKnown RBP11.87□□□□□ -0.51
CLDN18-201ENST00000183605 ARHGAP29Q52LW3 1261 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 CNTROBQ8N137 903 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 RUFY2Q8WXA3 655 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 CCDC69A6NI79 296 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 ERCC6LQ2NKX8 1250 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 MCM10Q7L590 875 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 NEK11Q8NG66 645 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 ZBTB9Q96C00 473 aa11.87□□□□□ -0.51
CLDN18-201ENST00000183605 DDX19AQ9NUU7 478 aaKnown RBP11.87□□□□□ -0.51
CLDN18-201ENST00000183605 GNAI3P08754 354 aa11.86□□□□□ -0.51
CLDN18-201ENST00000183605 CCT4P50991 539 aaKnown RBP11.86□□□□□ -0.51
CLDN18-201ENST00000183605 PRPF40BQ6NWY9 871 aaKnown RBP11.86□□□□□ -0.51
CLDN18-201ENST00000183605 SCAND2PQ9GZW5 306 aaPredicted RBP11.86□□□□□ -0.51
CLDN18-201ENST00000183605 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
CLDN18-201ENST00000183605 MSH6P52701 1360 aa11.86□□□□□ -0.51
CLDN18-201ENST00000183605 NEMFO60524 1076 aa11.86□□□□□ -0.51
CLDN18-201ENST00000183605 CCDC73Q6ZRK6 1079 aa11.86□□□□□ -0.51
CLDN18-201ENST00000183605 KIF2AO00139 706 aaPredicted RBP11.86□□□□□ -0.51
CLDN18-201ENST00000183605 ZSCAN31Q96LW9 406 aaPredicted RBP11.86□□□□□ -0.51
CLDN18-201ENST00000183605 PRAM1Q96QH2 718 aa11.86□□□□□ -0.51
CLDN18-201ENST00000183605 RSPH14Q9UHP6 348 aa11.86□□□□□ -0.51
CLDN18-201ENST00000183605 MRVI1Q9Y6F6 885 aa11.86□□□□□ -0.51
CLDN18-201ENST00000183605 TMEM87AQ8NBN3 555 aa11.85□□□□□ -0.51
CLDN18-201ENST00000183605 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
CLDN18-201ENST00000183605 A0A1W2PP64 1363 aa11.85□□□□□ -0.51
CLDN18-201ENST00000183605 ATP10AO60312 1499 aa11.85□□□□□ -0.51
CLDN18-201ENST00000183605 RGS12O14924 1447 aa11.85□□□□□ -0.51
CLDN18-201ENST00000183605 SYT10Q6XYQ8 523 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms