RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 SALL3Q9BXA9 1300 aa10.06□□□□□ -0.8
CDC27-201ENST00000066544 DNAAF4Q8WXU2 420 aa10.05□□□□□ -0.8
CDC27-201ENST00000066544 C9orf78Q9NZ63 289 aaPredicted RBP10.05□□□□□ -0.8
CDC27-201ENST00000066544 BTBD11A6QL63 1104 aa10.05□□□□□ -0.8
CDC27-201ENST00000066544 CWF19L2Q2TBE0 894 aaKnown RBP10.05□□□□□ -0.8
CDC27-201ENST00000066544 REREQ9P2R6 1566 aa10.05□□□□□ -0.8
CDC27-201ENST00000066544 CCDC173Q0VFZ6 552 aa10.05□□□□□ -0.8
CDC27-201ENST00000066544 PROSER3Q2NL68 480 aa10.05□□□□□ -0.8
CDC27-201ENST00000066544 CLEC17AQ6ZS10 378 aa10.04□□□□□ -0.8
CDC27-201ENST00000066544 KIAA1211Q6ZU35 1233 aa10.04□□□□□ -0.8
CDC27-201ENST00000066544 RASEFQ8IZ41 740 aa10.04□□□□□ -0.8
CDC27-201ENST00000066544 MSNP26038 577 aaKnown RBP10.04□□□□□ -0.8
CDC27-201ENST00000066544 EIF4A1P60842 406 aaKnown RBP10.04□□□□□ -0.8
CDC27-201ENST00000066544 SSH3Q8TE77 659 aa10.04□□□□□ -0.8
CDC27-201ENST00000066544 GADD45BO75293 160 aaPredicted RBP10.04□□□□□ -0.8
CDC27-201ENST00000066544 JARID2Q92833 1246 aaPredicted RBP10.04□□□□□ -0.8
CDC27-201ENST00000066544 SIL1Q9H173 461 aa10.04□□□□□ -0.8
CDC27-201ENST00000066544 NRKQ7Z2Y5 1582 aa10.04□□□□□ -0.8
CDC27-201ENST00000066544 HTATSF1O43719 755 aaKnown RBP10.04□□□□□ -0.8
CDC27-201ENST00000066544 TRHP20396 242 aaPredicted RBP10.04□□□□□ -0.8
CDC27-201ENST00000066544 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
CDC27-201ENST00000066544 RGPD8O14715 1765 aaPredicted RBP10.03□□□□□ -0.8
CDC27-201ENST00000066544 KCNJ4P48050 445 aa10.03□□□□□ -0.8
CDC27-201ENST00000066544 PIP4K2AP48426 406 aaPredicted RBP10.03□□□□□ -0.8
CDC27-201ENST00000066544 ZNF445P59923 1031 aa10.03□□□□□ -0.8
CDC27-201ENST00000066544 KIF1BPQ96EK5 621 aa10.03□□□□□ -0.8
CDC27-201ENST00000066544 DIAPH3Q9NSV4 1193 aa10.03□□□□□ -0.8
CDC27-201ENST00000066544 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
CDC27-201ENST00000066544 UBR1Q8IWV7 1749 aa10.03□□□□□ -0.8
CDC27-201ENST00000066544 ORAI2Q96SN7 254 aa10.03□□□□□ -0.8
CDC27-201ENST00000066544 STAP2Q9UGK3 403 aa10.03□□□□□ -0.8
CDC27-201ENST00000066544 MAP3K2Q9Y2U5 619 aa10.03□□□□□ -0.8
CDC27-201ENST00000066544 BRD1O95696 1058 aa10.02□□□□□ -0.8
CDC27-201ENST00000066544 PLCB2Q00722 1185 aa10.02□□□□□ -0.8
CDC27-201ENST00000066544 TCEANC2Q96MN5 208 aa10.02□□□□□ -0.8
CDC27-201ENST00000066544 BEND3Q5T5X7 828 aa10.02□□□□□ -0.81
CDC27-201ENST00000066544 FIBPO43427 364 aa10.02□□□□□ -0.81
CDC27-201ENST00000066544 C1orf141Q5JVX7 400 aa10.02□□□□□ -0.81
CDC27-201ENST00000066544 KLHDC4Q8TBB5 520 aa10.02□□□□□ -0.81
CDC27-201ENST00000066544 PI4K2BQ8TCG2 481 aa10.02□□□□□ -0.81
CDC27-201ENST00000066544 CCDC8Q9H0W5 538 aaPredicted RBP10.02□□□□□ -0.81
CDC27-201ENST00000066544 MCM2P49736 904 aa10.02□□□□□ -0.81
CDC27-201ENST00000066544 ZC3H6P61129 1189 aaKnown RBP10.02□□□□□ -0.81
CDC27-201ENST00000066544 SLC39A6Q13433 755 aa10.02□□□□□ -0.81
CDC27-201ENST00000066544 ZSCAN30Q86W11 494 aa10.02□□□□□ -0.81
CDC27-201ENST00000066544 CNTROBQ8N137 903 aa10.02□□□□□ -0.81
CDC27-201ENST00000066544 CLASRPQ8N2M8 674 aaKnown RBP10.02□□□□□ -0.81
CDC27-201ENST00000066544 IP6K1Q92551 441 aa10.02□□□□□ -0.81
CDC27-201ENST00000066544 PTMAP06454 111 aaKnown RBP10.01□□□□□ -0.81
CDC27-201ENST00000066544 CHMP3Q9Y3E7 222 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 CASTP20810 708 aaKnown RBP10.01□□□□□ -0.81
CDC27-201ENST00000066544 AK2P54819 239 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 PRPF40BQ6NWY9 871 aaKnown RBP10.01□□□□□ -0.81
CDC27-201ENST00000066544 SNX14Q9Y5W7 946 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 SGSM2O43147 1006 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 IFIT2P09913 472 aaKnown RBP10.01□□□□□ -0.81
CDC27-201ENST00000066544 MYL6BP14649 208 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 DIP2AQ14689 1571 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 USP48Q86UV5 1035 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 AACSQ86V21 672 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 CCDC83Q8IWF9 413 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 CNPY2Q9Y2B0 182 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 HSPA4P34932 840 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 CUL4AQ13619 759 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 PPP1R9BQ96SB3 815 aa10.01□□□□□ -0.81
CDC27-201ENST00000066544 JAKMIP1Q96N16 626 aaKnown RBP10□□□□□ -0.81
CDC27-201ENST00000066544 LARGE1O95461 756 aa10□□□□□ -0.81
CDC27-201ENST00000066544 PTH1RQ03431 593 aa10□□□□□ -0.81
CDC27-201ENST00000066544 LRSAM1Q6UWE0 723 aa10□□□□□ -0.81
CDC27-201ENST00000066544 PLEKHO1Q53GL0 409 aaPredicted RBP10□□□□□ -0.81
CDC27-201ENST00000066544 NECAB1Q8N987 351 aa10□□□□□ -0.81
CDC27-201ENST00000066544 RAB11FIP3O75154 756 aa10□□□□□ -0.81
CDC27-201ENST00000066544 ANAPC15P60006 121 aa10□□□□□ -0.81
CDC27-201ENST00000066544 VPS37CA5D8V6 355 aaPredicted RBP9.99□□□□□ -0.81
CDC27-201ENST00000066544 MBD3O95983 291 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 ADCK5Q3MIX3 580 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 POLA2Q14181 598 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 SMC3Q9UQE7 1217 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 RAD50Q92878 1312 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 ARID3AQ99856 593 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 BOLA2Q9H3K6 86 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 R3HCC1Q9Y3T6 440 aaKnown RBP9.99□□□□□ -0.81
CDC27-201ENST00000066544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.99□□□□□ -0.81
CDC27-201ENST00000066544 FERMT3Q86UX7 667 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 DBF4Q9UBU7 674 aaPredicted RBP9.99□□□□□ -0.81
CDC27-201ENST00000066544 GCP02774 474 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 COL9A3Q14050 684 aaPredicted RBP9.99□□□□□ -0.81
CDC27-201ENST00000066544 NDUFB9Q9Y6M9 179 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 RGPD1P0DJD0 1748 aa9.99□□□□□ -0.81
CDC27-201ENST00000066544 RUFY3Q7L099 469 aa9.98□□□□□ -0.81
CDC27-201ENST00000066544 EDC3Q96F86 508 aaKnown RBP9.98□□□□□ -0.81
CDC27-201ENST00000066544 LSG1Q9H089 658 aaKnown RBP9.98□□□□□ -0.81
CDC27-201ENST00000066544 WDR33Q9C0J8 1336 aaKnown RBP9.98□□□□□ -0.81
CDC27-201ENST00000066544 ANKRD24Q8TF21 1146 aa9.98□□□□□ -0.81
CDC27-201ENST00000066544 FAM227BQ96M60 508 aa9.98□□□□□ -0.81
CDC27-201ENST00000066544 GLRX3O76003 335 aaKnown RBP9.98□□□□□ -0.81
CDC27-201ENST00000066544 PIK3C2AO00443 1686 aa9.98□□□□□ -0.81
CDC27-201ENST00000066544 ADCY9O60503 1353 aa9.98□□□□□ -0.81
CDC27-201ENST00000066544 SYT1P21579 422 aa9.98□□□□□ -0.81
CDC27-201ENST00000066544 ECHDC1Q9NTX5 307 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms