RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 C11orf65Q8NCR3 313 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 IL4I1Q96RQ9 567 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 WRAP53Q9BUR4 548 aaKnown RBP14.06□□□□□ -0.16
SCARB2-221ENST00000640341 RETREG1Q9H6L5 497 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 DNMT3BQ9UBC3 853 aaKnown RBP14.06□□□□□ -0.16
SCARB2-221ENST00000640341 ITM2BQ9Y287 266 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 OR2A25A4D2G3 310 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 GREM1O60565 184 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ABLIM3O94929 683 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 JUNDP17535 347 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 S100A5P33763 92 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 GRK5P34947 590 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 FEN1P39748 380 aaKnown RBP14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ITGA1P56199 1179 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 HBA1P69905 142 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 HTRA3P83110 453 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ST3GAL4Q11206 333 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 MPPE1Q53F39 396 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ERICH5Q6P6B1 374 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 TAGAPQ8N103 731 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ZNF513Q8N8E2 541 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ZNF566Q969W8 418 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 OR4K3Q96R72 315 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 TMEM175Q9BSA9 504 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ZNF556Q9HAH1 456 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 PCDHGB3Q9Y5G1 929 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 SCAMP2O15127 329 aaKnown RBP14.05□□□□□ -0.16
SCARB2-221ENST00000640341 MMP21Q8N119 569 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 TCAIMQ8N3R3 496 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 Q8N9G6 341 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-221ENST00000640341 OR7G3Q8NG95 312 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ZNF675Q8TD23 568 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 SLC38A4Q969I6 547 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 NEIL2Q969S2 332 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 SLC35A5Q9BS91 424 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 TSEN34Q9BSV6 310 aaKnown RBP14.05□□□□□ -0.16
SCARB2-221ENST00000640341 CENPOQ9BU64 300 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 SORBS1Q9BX66 1292 aaKnown RBP14.05□□□□□ -0.16
SCARB2-221ENST00000640341 PLXNA4Q9HCM2 1894 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 HMX1Q9NP08 348 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-221ENST00000640341 FAM120CQ9NX05 1096 aaKnown RBP14.05□□□□□ -0.16
SCARB2-221ENST00000640341 POU2F3Q9UKI9 436 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 TMEM221A6NGB7 291 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 NUAK1O60285 661 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 PTHP01270 115 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ELP6Q0PNE2 266 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ZNF385BQ569K4 471 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 ARMCX4Q5H9R4 360 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 VMP1Q96GC9 406 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 PKP4Q99569 1192 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 DOHHQ9BU89 302 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 C14orf119Q9NWQ9 140 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 MS4A12Q9NXJ0 267 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 NDUFAF4Q9P032 175 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 SLC25A13Q9UJS0 675 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 BACE2Q9Y5Z0 518 aa14.05□□□□□ -0.16
SCARB2-221ENST00000640341 PNMA8CA0A1B0GUJ8 204 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 PCDH17O14917 1159 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 TEX28O15482 410 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 SOX14O95416 240 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 TGM1P22735 817 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 TGFBR2P37173 567 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 PCYT1AP49585 367 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 ARSIQ5FYB1 569 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 HMGN2P46Q86SG4 172 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 FAM124AQ86V42 546 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 RNF130Q86XS8 419 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 FAM217AQ8IXS0 508 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 SLC7A5P1Q8MH63 180 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 ELMOD1Q8N336 334 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 CBARPQ8N350 705 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-221ENST00000640341 GGHQ92820 318 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 C7orf34Q96L11 122 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 TPK1Q9H3S4 243 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 STOX2Q9P2F5 926 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-221ENST00000640341 SRRDQ9UH36 339 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 FAM32AQ9Y421 112 aaKnown RBP14.04□□□□□ -0.16
SCARB2-221ENST00000640341 PCDHGB1Q9Y5G3 927 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 LYVE1Q9Y5Y7 322 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 DNAJB5O75953 348 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 SOD2P04179 222 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 TPRG1LQ5T0D9 272 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 STEAP3Q658P3 488 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 ASTLQ6HA08 431 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-221ENST00000640341 CHCHD4Q8N4Q1 142 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 RHOXF1Q8NHV9 184 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 C11orf16Q9NQ32 467 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 WDR70Q9NW82 654 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 A0A0C4DFX4 3053 aa14.04□□□□□ -0.16
SCARB2-221ENST00000640341 M0R082 166 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 LEFTY2O00292 366 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 LEFTY1O75610 366 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 HOXB9P17482 250 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-221ENST00000640341 MAGEA8P43361 318 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 ALDH9A1P49189 494 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 C2orf80Q0P641 193 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 MTAPQ13126 283 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 LEXMQ3ZCV2 418 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 SPATC1Q76KD6 591 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 CCM2Q9BSQ5 444 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms