RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PKD2L2Q9NZM6 624 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 POLKQ9UBT6 870 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 CROCCQ5TZA2 2017 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 PASKQ96RG2 1323 aa3.68□□□□□ -1.82
CCDC7-216ENST00000640058 hCG_38984A0A1B0GV85 526 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 ARHGEF33A8MVX0 844 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 H3BMM5 538 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 KLK2P20151 261 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 MTCP1P56278 107 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 SIX1Q15475 284 aaPredicted RBP3.67□□□□□ -1.82
CCDC7-216ENST00000640058 CRY2Q49AN0 593 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 RBPMS2Q6ZRY4 209 aaKnown RBP3.67□□□□□ -1.82
CCDC7-216ENST00000640058 ADCK1Q86TW2 530 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 ZBED8Q8IZ13 594 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 CD177Q8N6Q3 437 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 OR4Q3Q8NH05 313 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 SEPT1Q8WYJ6 367 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 NUDT16L1Q9BRJ7 211 aaKnown RBP3.67□□□□□ -1.82
CCDC7-216ENST00000640058 GTPBP2Q9BX10 602 aaKnown RBP3.67□□□□□ -1.82
CCDC7-216ENST00000640058 OCR1Q9BZK8 76 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 IL1RAPQ9NPH3 570 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 ABCB10Q9NRK6 738 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 WDR35Q9P2L0 1181 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 KLK11Q9UBX7 282 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 FBXL4Q9UKA2 621 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 VSIG4Q9Y279 399 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 IL16Q14005 1332 aa3.67□□□□□ -1.82
CCDC7-216ENST00000640058 MYH14Q7Z406 1995 aaKnown RBP3.66□□□□□ -1.82
CCDC7-216ENST00000640058 MTRF1O75570 445 aaKnown RBP3.66□□□□□ -1.82
CCDC7-216ENST00000640058 CD59P13987 128 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 CLDN17P56750 224 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 MZT1Q08AG7 82 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 C3AR1Q16581 482 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 FAM182AQ5T1J6 154 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 PRSS55Q6UWB4 352 aaPredicted RBP3.66□□□□□ -1.82
CCDC7-216ENST00000640058 C5orf24Q7Z6I8 188 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 MAML2Q8IZL2 1156 aaPredicted RBP3.66□□□□□ -1.82
CCDC7-216ENST00000640058 CASP10Q92851 521 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 LRRC3BQ96PB8 259 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 POLLQ9UGP5 575 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 PILRAQ9UKJ1 303 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 CELA1Q9UNI1 258 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 MRPS18CQ9Y3D5 142 aaKnown RBP3.66□□□□□ -1.82
CCDC7-216ENST00000640058 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
CCDC7-216ENST00000640058 IQCMA0A1B0GVH7 501 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 TRIM49BA6NDI0 452 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 URADA6NGE7 173 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 YES1P07947 543 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 MYBL1P10243 752 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 AKR1B1P15121 316 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 GIFP27352 417 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 TRA2BP62995 288 aaKnown RBP3.65□□□□□ -1.83
CCDC7-216ENST00000640058 SRPXP78539 464 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 ITPK1Q13572 414 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 LEMD1Q68G75 181 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 ENPP7Q6UWV6 458 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 ANKRD33Q7Z3H0 272 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 PRPF39Q86UA1 669 aaKnown RBP3.65□□□□□ -1.83
CCDC7-216ENST00000640058 AMIGO1Q86WK6 493 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 SLC34A3Q8N130 599 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 PI4KAP1Q8N8J0 262 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 C4orf32Q8N8J7 132 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 KCTD6Q8NC69 237 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 PGAP3Q96FM1 320 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-216ENST00000640058 IL12RB2Q99665 862 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 FZD8Q9H461 694 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 FN3KQ9H479 309 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 C3orf14Q9HBI5 128 aa3.65□□□□□ -1.83
CCDC7-216ENST00000640058 E5RGE8 158 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 F8VVB4 439 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 F8VWA3 439 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 SIGLEC5O15389 551 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 SH3BGRLO75368 114 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 PRDM1O75626 825 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 RECQL5O94762 991 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-216ENST00000640058 CD1DP15813 335 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 EPORP19235 508 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 ACAT1P24752 427 aaKnown RBP3.64□□□□□ -1.83
CCDC7-216ENST00000640058 LMO2P25791 158 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 HSPA4P34932 840 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 ACY1Q03154 408 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 PRPF4BQ13523 1007 aaKnown RBP3.64□□□□□ -1.83
CCDC7-216ENST00000640058 MLF2Q15773 248 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-216ENST00000640058 SPANXN4Q5MJ08 99 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 AGAP7PQ5VUJ5 663 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 KRTAP11-1Q8IUC1 163 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 OR6J1Q8NGC5 347 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 TAAR6Q96RI8 345 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 LRRCC1Q9C099 1032 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 BCCIPQ9P287 314 aaKnown RBP eCLIP3.64□□□□□ -1.83
CCDC7-216ENST00000640058 B4GALT7Q9UBV7 327 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 NSG2Q9Y328 171 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 RNF123Q5XPI4 1314 aa3.64□□□□□ -1.83
CCDC7-216ENST00000640058 A0A1B0GTH9 108 aa3.63□□□□□ -1.83
CCDC7-216ENST00000640058 A0A1W2PPW3 197 aa3.63□□□□□ -1.83
CCDC7-216ENST00000640058 KIF5CO60282 957 aa3.63□□□□□ -1.83
CCDC7-216ENST00000640058 GSK3BP49841 420 aa3.63□□□□□ -1.83
CCDC7-216ENST00000640058 ABCE1P61221 599 aaKnown RBP3.63□□□□□ -1.83
CCDC7-216ENST00000640058 AIMP1Q12904 312 aaKnown RBP3.63□□□□□ -1.83
CCDC7-216ENST00000640058 C9orf66Q5T8R8 295 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms