RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 ZNF490Q9ULM2 529 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-218ENST00000640036 SNX10Q9Y5X0 201 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 A0A0G2JMP0 313 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 AOC1P19801 751 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 CDKN1CP49918 316 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-218ENST00000640036 PTSQ03393 145 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 XYLT1Q86Y38 959 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 CPEB3Q8NE35 698 aaKnown RBP4.86□□□□□ -1.63
SCN1A-218ENST00000640036 OR4M2Q8NGB6 313 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 CHAC2Q8WUX2 184 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 FCRL3Q96P31 734 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-218ENST00000640036 G6PC3Q9BUM1 346 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 RBCK1Q9BYM8 510 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 ROPN1BQ9BZX4 212 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-218ENST00000640036 ROPN1Q9HAT0 212 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-218ENST00000640036 MLXIPLQ9NP71 852 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 SPHK1Q9NYA1 384 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 ADAM21Q9UKJ8 722 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 ING4Q9UNL4 249 aa4.86□□□□□ -1.63
SCN1A-218ENST00000640036 SLC9B1P1A6NJY1 282 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 STX16-NPEPL1H3BU86 382 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 FOXE1O00358 373 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 STX16O14662 325 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 PHGDHO43175 533 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 LBPP18428 481 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 TARSP26639 723 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 ACVRL1P37023 503 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 CCR5P51681 352 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 CCZ1BP86790 482 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 CCZ1P86791 482 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 RHAGQ02094 409 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 DLX2Q07687 328 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 MAPK7Q13164 816 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 SF3A2Q15428 464 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 TRIM74Q86UV6 250 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 TBC1D21Q8IYX1 336 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 C4orf33Q8N1A6 199 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 SPATA4Q8NEY3 305 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 UTP15Q8TED0 518 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 TRNT1Q96Q11 434 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 OPA3Q9H6K4 179 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 TMEM248Q9NWD8 314 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 TRAV17A0A0B4J275 112 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 M0QZQ0 153 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 NUAK1O60285 661 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 ACTL6BO94805 426 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 S1PR4O95977 384 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 KLK7P49862 253 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 RPL38P63173 70 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 SYT16Q17RD7 645 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 TMEM154Q6P9G4 183 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 ZNF730Q6ZMV8 503 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 TMEM26Q6ZUK4 368 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 PHF10Q8WUB8 498 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 HSPBAP1Q96EW2 488 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 SLC30A2Q9BRI3 323 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 HDHD5Q9BXW7 423 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 SLC19A3Q9BZV2 496 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 SYT4Q9H2B2 425 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 QPCTLQ9NXS2 382 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 NUDT4Q9NZJ9 180 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 NOP16Q9Y3C1 178 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 PCDHB14Q9Y5E9 798 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 MARF1Q9Y4F3 1742 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 DOCK10Q96BY6 2186 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 A0A0G2JN53 185 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 PRSS38A1L453 326 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 CLOCKO15516 846 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 HCRTR2O43614 444 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 KIAA0513O60268 411 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 DLGAP3O95886 979 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 NR2F6P10588 404 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 HSD11B1P28845 292 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 NCBP2P52298 156 aaKnown RBP eCLIP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 HSD11B2P80365 405 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 CTBP1Q13363 440 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 KCNC3Q14003 757 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 KIR2DS3Q14952 304 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 CYP27C1Q4G0S4 372 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 RBM20Q5T481 1227 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 NYAP1Q6ZVC0 841 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 ARMC8Q8IUR7 673 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 CACTIN-AS1Q8N1I8 211 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 Q8N402 240 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 CHCHD4Q8N4Q1 142 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 CADM4Q8NFZ8 388 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 DNAJC19Q96DA6 116 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 OMA1Q96E52 524 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 CADM1Q9BY67 442 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 SNX15Q9NRS6 342 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 TRNAU1APQ9NX07 287 aaKnown RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 IKZF2Q9UKS7 526 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 KLF13Q9Y2Y9 288 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 BTN3A3O00478 584 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 GNB5O14775 395 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 PAPSS1O43252 624 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 ZNF500O60304 480 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-218ENST00000640036 ETV3P41162 512 aa4.85□□□□□ -1.63
SCN1A-218ENST00000640036 GRIA3P42263 894 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms