RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 ELFN1P0C7U0 828 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 ANXA7P20073 488 aaKnown RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 PKIAP61925 76 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 C8orf58Q8NAV2 365 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 OR6F1Q8NGZ6 308 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 SMIM12Q96EX1 92 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 MED8Q96G25 268 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 PDLIM5Q96HC4 596 aaKnown RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 PTTG3PQ9NZH4 202 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 ZNF282Q9UDV7 671 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 ADGRF5Q8IZF2 1346 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 THBS1P07996 1170 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 USP17L7P0C7H9 530 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 UBAP2LQ14157 1087 aaKnown RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 SFRP5Q5T4F7 317 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 LRFN4Q6PJG9 635 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 GK5Q6ZS86 529 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 BBS12Q6ZW61 710 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 TEAD3Q99594 435 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 NPAS1Q99742 590 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 GPRC5CQ9NQ84 441 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 DNAJC28Q9NX36 388 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 STUB1Q9UNE7 303 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 CLIC4Q9Y696 253 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 LINC00862A6NCI5 91 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 SEC14L6B5MCN3 397 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 GGCTO75223 188 aaKnown RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 RPS6KA4O75676 772 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 IFNA17P01571 189 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 ITGA6P23229 1130 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 DNASE1P24855 282 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 NUTF2P61970 127 aaKnown RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 SLC10A7Q0GE19 358 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 P2RY14Q15391 338 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 FAM187BQ17R55 369 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 CERKLQ49MI3 558 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 PHYHD1Q5SRE7 291 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 OR5M10Q6IEU7 315 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 ZNF517Q6ZMY9 492 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 LINGO2Q7L985 606 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 VSIG10LQ86VR7 867 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 DCUN1D3Q8IWE4 304 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 UBQLNLQ8IYU4 475 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 OR51A7Q8NH64 312 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 PCBD2Q9H0N5 130 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 SMURF1Q9HCE7 757 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 EMILIN3Q9NT22 766 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 ZNF821O75541 412 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 UGT2B4P06133 528 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 HEXAP06865 529 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 ATP5A1P25705 553 aaKnown RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 STOMP27105 288 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 NDUFS1P28331 727 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 DGKZQ13574 1117 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 DIP2AQ14689 1571 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 OR4D1Q15615 310 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 FAM47AQ5JRC9 791 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 SPOUT1Q5T280 376 aaKnown RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 OR5T3Q8NGG3 340 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 OR5D18Q8NGL1 313 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 NRG4Q8WWG1 115 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 RBPMSQ93062 196 aaKnown RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 ZBTB8AQ96BR9 441 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 MAP3K3Q99759 626 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 C11orf84Q9BUA3 381 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-209ENST00000639244 CHRDQ9H2X0 955 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 OPN4Q9UHM6 478 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 MAB21L2Q9Y586 359 aa4.18□□□□□ -1.74
SCN3A-209ENST00000639244 TRAPPC8Q9Y2L5 1435 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRAMEF27A3QJZ7 478 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRAMEF25A6NGN4 478 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRAMEF26H0Y7S4 382 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRAMEF4O60810 478 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRAMEF11O60813 436 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 GLCEO94923 617 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 RRASP10301 218 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 FMO3P31513 532 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 CA5AP35218 305 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRKAA2P54646 552 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 RPL19P84098 196 aaKnown RBP4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRAMEF14Q5SWL7 426 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRAMEF5Q5TYX0 476 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRAMEF9Q5VWM5 478 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRAMEF13Q5VWM6 474 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PRAMEF6Q5VXH4 476 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 KMT5CQ86Y97 462 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 FIBCD1Q8N539 461 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 TSEN2Q8NCE0 465 aaKnown RBP4.17□□□□□ -1.74
SCN3A-209ENST00000639244 OR5M11Q96RB7 305 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 FUZQ9BT04 418 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 YTHDF1Q9BYJ9 559 aaKnown RBP4.17□□□□□ -1.74
SCN3A-209ENST00000639244 ECHDC1Q9NTX5 307 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 SMOXQ9NWM0 555 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 MS4A12Q9NXJ0 267 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 PCDHB7Q9Y5E2 793 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 ANKRD31Q8N7Z5 1873 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 OVOS2A0A0G2JMS6 1433 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 OVOS2A0A0J9YW53 1432 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 OVOS2Q6IE36 1432 aa4.17□□□□□ -1.74
SCN3A-209ENST00000639244 KDM4EB2RXH2 506 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms