RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 SLC30A6Q6NXT4 461 aa13.15□□□□□ -0.3
SCARB2-215ENST00000639145 TTLL10Q6ZVT0 673 aa13.15□□□□□ -0.3
SCARB2-215ENST00000639145 OXR1Q8N573 874 aa13.15□□□□□ -0.3
SCARB2-215ENST00000639145 ARRDC2Q8TBH0 407 aa13.15□□□□□ -0.3
SCARB2-215ENST00000639145 SNRNP27Q8WVK2 155 aaKnown RBP13.15□□□□□ -0.3
SCARB2-215ENST00000639145 SH3YL1Q96HL8 342 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-215ENST00000639145 APOOQ9BUR5 198 aa13.15□□□□□ -0.3
SCARB2-215ENST00000639145 TRIM8Q9BZR9 551 aa13.15□□□□□ -0.3
SCARB2-215ENST00000639145 C11orf16Q9NQ32 467 aa13.15□□□□□ -0.3
SCARB2-215ENST00000639145 ZSCAN32Q9NX65 697 aa13.15□□□□□ -0.3
SCARB2-215ENST00000639145 SMPD3Q9NY59 655 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-215ENST00000639145 CNOT1A5YKK6 2376 aaKnown RBP13.14□□□□□ -0.31
SCARB2-215ENST00000639145 ELOA3DA6NLF2 546 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-215ENST00000639145 WASH4PA8MWX3 477 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 PDYNP01213 254 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 P2RY2P41231 377 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 RABIFP47224 123 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 XKP51811 444 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 GRB7Q14451 532 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 DEFB133Q30KQ1 61 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 ELOA3BQ3SY89 546 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 LACTB2Q53H82 288 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-215ENST00000639145 IER5LQ5T953 404 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 TRIQKQ629K1 86 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 TRIM73Q86UV7 250 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 CSNK1A1LQ8N752 337 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 ELOA3Q8NG57 546 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 FCRL4Q96PJ5 515 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 KLRF1Q9NZS2 232 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 SCML1Q9UN30 329 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 SEC16AO15027 2179 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 OR5F1O95221 314 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 FHP07954 510 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 CHRM5P08912 532 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-215ENST00000639145 ALOX12P18054 663 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 CTSCP53634 463 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 ITGA1P56199 1179 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 ENPP2Q13822 863 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 ZNF311Q5JNZ3 666 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 C1orf189Q5VU69 101 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 RTL10Q7L3V2 364 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 ISCA2Q86U28 154 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 OR4K14Q8NGD5 310 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 PHOSPHO1Q8TCT1 267 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 TMEM174Q8WUU8 243 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 C1GALT1C1Q96EU7 318 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 LRCH3Q96II8 777 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 IFT80Q9P2H3 777 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-215ENST00000639145 PDE10AQ9Y233 779 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 HOXB6P17509 224 aaKnown RBP13.14□□□□□ -0.31
SCARB2-215ENST00000639145 PTNP21246 168 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 ATP5A1P25705 553 aaKnown RBP13.14□□□□□ -0.31
SCARB2-215ENST00000639145 ECHS1P30084 290 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 DNAJB13P59910 316 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 OR4N5Q8IXE1 308 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 SUN3Q8TAQ9 357 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 KIAA1143Q96AT1 154 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-215ENST00000639145 CHFRQ96EP1 664 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 POLR2J3Q9H1A7 115 aaKnown RBP13.14□□□□□ -0.31
SCARB2-215ENST00000639145 PCDHGA2Q9Y5H1 932 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 PHIPQ8WWQ0 1821 aa13.14□□□□□ -0.31
SCARB2-215ENST00000639145 CASRP41180 1078 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 RSBN1Q5VWQ0 802 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-215ENST00000639145 LIPJQ5W064 366 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 AHSA2Q719I0 299 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 GJD3Q8N144 294 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 MOSPD2Q8NHP6 518 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 NFKBIDQ8NI38 313 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 IFT27Q9BW83 186 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 STRADBQ9C0K7 418 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 PRTFDC1Q9NRG1 225 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 TVP23BQ9NYZ1 205 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 TRBC2A0A5B9 178 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 IL3P08700 152 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 ACADLP28330 430 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 SLAMF1Q13291 335 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 TDGQ13569 410 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 C16orf72Q14CZ0 275 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 CLEC12AQ5QGZ9 265 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 CATSPEREQ5SY80 951 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 GPR107Q5VW38 600 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 NUP54Q7Z3B4 507 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.13□□□□□ -0.31
SCARB2-215ENST00000639145 KRTCAP2Q8N6L1 136 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 ZDHHC1Q8WTX9 485 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 ISG20Q96AZ6 181 aaKnown RBP13.13□□□□□ -0.31
SCARB2-215ENST00000639145 CPEB1Q9BZB8 566 aaKnown RBP13.13□□□□□ -0.31
SCARB2-215ENST00000639145 CWH43Q9H720 699 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 NEUROD4Q9HD90 331 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 ARHGEF3Q9NR81 526 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 FAM120CQ9NX05 1096 aaKnown RBP13.13□□□□□ -0.31
SCARB2-215ENST00000639145 WDR45Q9Y484 360 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 DNAJC13O75165 2243 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 TRAPPC6AO75865 159 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 HMGA1P17096 107 aaKnown RBP13.13□□□□□ -0.31
SCARB2-215ENST00000639145 CYS1Q717R9 158 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 OR8K5Q8NH50 307 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 OR4C6Q8NH72 309 aa13.13□□□□□ -0.31
SCARB2-215ENST00000639145 DNAJB8Q8NHS0 232 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms