RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 BTN3A2P78410 334 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 C6orf141Q5SZD1 244 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 C1orf189Q5VU69 101 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 ZNF367Q7RTV3 350 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 PAK1IP1Q9NWT1 392 aaPredicted RBP17.92■□□□□ 0.46
SCARB2-213ENST00000638680 SEC14L4Q9UDX3 406 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 CFAP20Q9Y6A4 193 aaKnown RBP17.92■□□□□ 0.46
SCARB2-213ENST00000638680 ZNF670-ZNF695F2Z2N8 137 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 ZNF8P17098 575 aaPredicted RBP17.92■□□□□ 0.46
SCARB2-213ENST00000638680 S100A2P29034 98 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 MLLT10P55197 1068 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 DSG2Q14126 1118 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 MSANTD1Q6ZTZ1 278 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 ABHD13Q7L211 337 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 DRAXINQ8NBI3 349 aaPredicted RBP17.92■□□□□ 0.46
SCARB2-213ENST00000638680 FNDC8Q8TC99 324 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 GPR88Q9GZN0 384 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 OR51B5Q9H339 312 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 CENPMQ9NSP4 180 aa17.92■□□□□ 0.46
SCARB2-213ENST00000638680 NLE1Q9NVX2 485 aaPredicted RBP17.92■□□□□ 0.46
SCARB2-213ENST00000638680 BHMG1C9JSJ3 638 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-213ENST00000638680 M0R036 132 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 NXPE2Q96DL1 559 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 ZNF350Q9GZX5 532 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 MEAF6Q9HAF1 191 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 SNED1Q8TER0 1413 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 PABPC4LP0CB38 370 aaKnown RBP17.91■□□□□ 0.46
SCARB2-213ENST00000638680 MLLT6P55198 1093 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-213ENST00000638680 ZNF267Q14586 743 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-213ENST00000638680 C6orf136Q5SQH8 315 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 ZNF227Q86WZ6 799 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 HDDC3Q8N4P3 179 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 SLC7A6OSQ96CW6 309 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-213ENST00000638680 NSUN5Q96P11 429 aaKnown RBP17.91■□□□□ 0.46
SCARB2-213ENST00000638680 ZNF696Q9H7X3 374 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 CAMTA1Q9Y6Y1 1673 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 LHCGRP22888 699 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 NPY6RQ99463 290 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 MTMR10Q9NXD2 777 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 EXOSC1Q9Y3B2 195 aaKnown RBP17.91■□□□□ 0.46
SCARB2-213ENST00000638680 CYB5AP00167 134 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 MATN1P21941 496 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 VAMP1P23763 118 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 ODF4Q2M2E3 257 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 OGFRL1Q5TC84 451 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-213ENST00000638680 CDCA2Q69YH5 1023 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-213ENST00000638680 AKAP1Q92667 903 aaKnown RBP eCLIP17.91■□□□□ 0.466e-6■■□□□ 12.3
SCARB2-213ENST00000638680 BTBD1Q9H0C5 482 aa17.91■□□□□ 0.46
SCARB2-213ENST00000638680 NOP16Q9Y3C1 178 aaKnown RBP17.91■□□□□ 0.46
SCARB2-213ENST00000638680 C13orf42A0A1B0GVH6 325 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 INMT-MINDY4F8WBC2 141 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 SOCS2O14508 198 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 APOL3O95236 402 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 CHRNA1P02708 482 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 C8AP07357 584 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 CXCR1P25024 350 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 BMP8BP34820 402 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 ENPP2Q13822 863 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 CEACAM7Q14002 265 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 CTC1Q2NKJ3 1217 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 MS4A13Q5J8X5 152 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 BMP8AQ7Z5Y6 402 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 JAGN1Q8N5M9 183 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 ASCC1Q8N9N2 400 aaKnown RBP17.9■□□□□ 0.46
SCARB2-213ENST00000638680 OR8J3Q8NGG0 315 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 SH3RF2Q8TEC5 729 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 HERVK_113Q902F9 699 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 ABCG4Q9H172 646 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 A0A1B0GVT2 93 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 SLC45A3Q96JT2 553 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 CD180Q99467 661 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 MGAT4BQ9UQ53 548 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 ZNF81P51508 661 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 MAPK14Q16539 360 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 FAM76BQ5HYJ3 339 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 DGLUCYQ7Z3D6 616 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 GTPBP2Q9BX10 602 aaKnown RBP17.9■□□□□ 0.46
SCARB2-213ENST00000638680 POPDC3Q9HBV1 291 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 NEUROD4Q9HD90 331 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 PNO1Q9NRX1 252 aaKnown RBP17.9■□□□□ 0.46
SCARB2-213ENST00000638680 A0A0G2JLL6 359 aaPredicted RBP17.9■□□□□ 0.46
SCARB2-213ENST00000638680 FBP2O00757 339 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 FKTNO75072 461 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 HPRP00739 348 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 C8orf89P0DMQ9 161 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 CKMT1AP12532 417 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 VAMP2P63027 116 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 CHAF1BQ13112 559 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 PRRT2Q7Z6L0 340 aaPredicted RBP17.9■□□□□ 0.46
SCARB2-213ENST00000638680 TICAM1Q8IUC6 712 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 SCML4Q8N228 414 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 LNX2Q8N448 690 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 GAL3ST3Q96A11 431 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 SHISA4Q96DD7 197 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 SUSD3Q96L08 255 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 BIRC8Q96P09 236 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 SMURF1Q9HCE7 757 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 RHPN2P1A8MT19 583 aa17.9■□□□□ 0.46
SCARB2-213ENST00000638680 DENRO43583 198 aaKnown RBP17.9■□□□□ 0.46
SCARB2-213ENST00000638680 KDELR3O43731 214 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms