RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ARGFXA6NJG6 315 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 K7EPI3 171 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 SGK494L7N484 410 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 SLC35G6P0C7Q6 338 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 AHRP35869 848 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 HNF4AP41235 474 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 CCR10P46092 362 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 CHIT1Q13231 466 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 ATP1A4Q13733 1029 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 SSPNQ14714 243 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 VN1R5Q7Z5H4 357 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 PPP1R32Q7Z5V6 425 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 TEX9Q8N6V9 391 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 APOBEC4Q8WW27 367 aaKnown RBP20.66■□□□□ 0.9
SCN1B-206ENST00000638536 PHF21BQ96EK2 531 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 WBP1Q96G27 269 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 WDR54Q9H977 334 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 TMEM216Q9P0N5 145 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 OPTCQ9UBM4 332 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 TRPC4Q9UBN4 977 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 CDC14AQ9UNH5 594 aa20.66■□□□□ 0.9
SCN1B-206ENST00000638536 IQANK1A0A1B0GTG1 560 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 CLGNO14967 610 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 JRKO75564 520 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 WFS1O76024 890 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 ZGLP1P0C6A0 271 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 PYGBP11216 843 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 ALDH18A1P54886 795 aaKnown RBP20.65■□□□□ 0.9
SCN1B-206ENST00000638536 KLC1Q07866 573 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 PWP1Q13610 501 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 NDUFA9Q16795 377 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 TMIGD1Q6UXZ0 262 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 AFAP1L2Q8N4X5 818 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 PTGR2Q8N8N7 351 aaPredicted RBP20.65■□□□□ 0.9
SCN1B-206ENST00000638536 NT5CQ8TCD5 201 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 THAP4Q8WY91 577 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 WDR34Q96EX3 536 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 CCDC77Q9BR77 488 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 YIPF2Q9BWQ6 316 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 CAPS2Q9BXY5 557 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 COPG2Q9UBF2 871 aa20.65■□□□□ 0.9
SCN1B-206ENST00000638536 ZNF282Q9UDV7 671 aaPredicted RBP20.65■□□□□ 0.9
SCN1B-206ENST00000638536 CCDC189A1A4V9 331 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 ZNF860A6NHJ4 632 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 H2AFYO75367 372 aaKnown RBP20.64■□□□□ 0.9
SCN1B-206ENST00000638536 NSA2O95478 260 aaKnown RBP20.64■□□□□ 0.9
SCN1B-206ENST00000638536 RBP1P09455 135 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 TSNAXIP1Q2TAA8 658 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 SH2D5Q6ZV89 423 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 RPS27LQ71UM5 84 aaKnown RBP20.64■□□□□ 0.9
SCN1B-206ENST00000638536 MRGPREQ86SM8 312 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 UTP15Q8TED0 518 aaKnown RBP20.64■□□□□ 0.9
SCN1B-206ENST00000638536 SLC6A16Q9GZN6 736 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 EHD1Q9H4M9 534 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 HCN3Q9P1Z3 774 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 NAALAD2Q9Y3Q0 740 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 MAP4K5Q9Y4K4 846 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 SLC22A7Q9Y694 548 aa20.64■□□□□ 0.9
SCN1B-206ENST00000638536 CNTRLQ7Z7A1 2325 aa20.64■□□□□ 0.89
SCN1B-206ENST00000638536 RDH16O75452 317 aa20.64■□□□□ 0.89
SCN1B-206ENST00000638536 C1QL1O75973 258 aa20.64■□□□□ 0.89
SCN1B-206ENST00000638536 ZNF888P0CJ79 500 aaPredicted RBP20.64■□□□□ 0.89
SCN1B-206ENST00000638536 IRF8Q02556 426 aa20.64■□□□□ 0.89
SCN1B-206ENST00000638536 E2F2Q14209 437 aa20.64■□□□□ 0.89
SCN1B-206ENST00000638536 PCBP2Q15366 365 aaKnown RBP eCLIP20.64■□□□□ 0.89
SCN1B-206ENST00000638536 TBC1D19Q8N5T2 526 aa20.64■□□□□ 0.89
SCN1B-206ENST00000638536 AMER2Q8N7J2 671 aa20.64■□□□□ 0.89
SCN1B-206ENST00000638536 OR5T3Q8NGG3 340 aa20.64■□□□□ 0.89
SCN1B-206ENST00000638536 MIEF2Q96C03 454 aa20.64■□□□□ 0.89
SCN1B-206ENST00000638536 PTCD3Q96EY7 689 aaKnown RBP20.64■□□□□ 0.89
SCN1B-206ENST00000638536 MRPL57Q9BQC6 102 aaKnown RBP20.64■□□□□ 0.89
SCN1B-206ENST00000638536 OR2W5A6NFC9 320 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 H0YIG0 161 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 K7EM74 188 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 E2F3O00716 465 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 KLHL18O94889 574 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 CD63P08962 238 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 EEF1DP29692 281 aaKnown RBP20.63■□□□□ 0.89
SCN1B-206ENST00000638536 AVPR1BP47901 424 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 RAB8AP61006 207 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 OCA2Q04671 838 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 DEFB134Q4QY38 66 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 TDRPQ86YL5 185 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 ZC3H7AQ8IWR0 971 aaKnown RBP20.63■□□□□ 0.89
SCN1B-206ENST00000638536 LSM14AQ8ND56 463 aaKnown RBP20.63■□□□□ 0.89
SCN1B-206ENST00000638536 TRPV3Q8NET8 790 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 NSUN5Q96P11 429 aaKnown RBP20.63■□□□□ 0.89
SCN1B-206ENST00000638536 ING2Q9H160 280 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 MRPL46Q9H2W6 279 aaKnown RBP20.63■□□□□ 0.89
SCN1B-206ENST00000638536 ANKHQ9HCJ1 492 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 ACSS2Q9NR19 701 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 HS3ST3B1Q9Y662 390 aa20.63■□□□□ 0.89
SCN1B-206ENST00000638536 SOCS6O14544 535 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 SMIM10L1P0DMW3 83 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 EPB42P16452 691 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 CXCR2P25025 360 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 HNRNPH1P31943 449 aaKnown RBP20.62■□□□□ 0.89
SCN1B-206ENST00000638536 CASP2P42575 452 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 OLR1P78380 273 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 RGS1Q08116 209 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms