RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SRSF11Q05519 484 aaKnown RBP7.44□□□□□ -1.22
PNKP-229ENST00000637897 SLC18A2Q05940 514 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 PDK4Q16654 411 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 YOD1Q5VVQ6 348 aaPredicted RBP7.44□□□□□ -1.22
PNKP-229ENST00000637897 PRAMEF13Q5VWM6 474 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 TIFABQ6ZNK6 161 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 YTHDF3Q7Z739 585 aaKnown RBP7.44□□□□□ -1.22
PNKP-229ENST00000637897 PIGWQ7Z7B1 504 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 KCNMB4Q86W47 210 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 PDSS2Q86YH6 399 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 PARP9Q8IXQ6 854 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 LRRC34Q8IZ02 419 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 C4orf33Q8N1A6 199 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 CISD2Q8N5K1 135 aaKnown RBP7.44□□□□□ -1.22
PNKP-229ENST00000637897 CSNK1A1LQ8N752 337 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.44□□□□□ -1.22
PNKP-229ENST00000637897 CCDC197Q8NCU1 140 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 CATSPER1Q8NEC5 780 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 ACMSDQ8TDX5 336 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 TM4SF19Q96DZ7 209 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 MOCOSQ96EN8 888 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 APOPT1Q96IL0 206 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 SEC16BQ96JE7 1060 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 PRAP1Q96NZ9 151 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 SGPP1Q9BX95 441 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 IQCGQ9H095 443 aaKnown RBP7.44□□□□□ -1.22
PNKP-229ENST00000637897 VPS11Q9H270 941 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 ZNF304Q9HCX3 659 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 MRPS30Q9NP92 439 aaKnown RBP7.44□□□□□ -1.22
PNKP-229ENST00000637897 IRAK4Q9NWZ3 460 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 MKS1Q9NXB0 559 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 NSMCE4AQ9NXX6 385 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 C5AR2Q9P296 337 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 TXNDC16Q9P2K2 825 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 PADI2Q9Y2J8 665 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 CPAMD8Q8IZJ3 1885 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 DIDO1Q9BTC0 2240 aaKnown RBP7.44□□□□□ -1.22
PNKP-229ENST00000637897 CROCCQ5TZA2 2017 aa7.44□□□□□ -1.22
PNKP-229ENST00000637897 LOC102723996A0A087X1L8 192 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 A0A0A6YYC8 382 aaPredicted RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 FEZF1A0PJY2 475 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 CXorf49A8MYA2 514 aaPredicted RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 C4orf51C9J302 202 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 E5RI56 91 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 F8W8V4 182 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 I3L1I5 382 aaPredicted RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 COPEO14579 308 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 MAP3K7O43318 606 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 KDM1AO60341 852 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 DPM1O60762 260 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 B3GALT4O96024 378 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 CATP04040 527 aaKnown RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 NPPBP16860 134 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 PAMP19021 973 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 FDXRP22570 491 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 CMPK1P30085 196 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 SOX11P35716 441 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 GMPRP36959 345 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 EMP3P54852 163 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 WDR4P57081 412 aaKnown RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 TBPL1P62380 186 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 RELAQ04206 551 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 AIMP2Q13155 320 aaKnown RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 THOC5Q13769 683 aaKnown RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 DSG2Q14126 1118 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 PCOLCEQ15113 449 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 GRTP1Q5TC63 336 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 B3GNTL1Q67FW5 361 aaPredicted RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 TMEM214Q6NUQ4 689 aaKnown RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 UGT3A1Q6NUS8 523 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 TMEM205Q6UW68 189 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 SBSNQ6UWP8 590 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 SH2D5Q6ZV89 423 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 UBE2R2Q712K3 238 aaPredicted RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 TTC29Q8NA56 475 aaPredicted RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 KCT2Q8NC54 265 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 ZNF740Q8NDX6 193 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 LRRC8CQ8TDW0 803 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 NACC2Q96BF6 587 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 CERS2Q96G23 380 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 CABS1Q96KC9 395 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 IMMP1LQ96LU5 166 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 FER1L6-AS2Q96M78 137 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 FOPNLQ96NB1 174 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 IP6K3Q96PC2 410 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 NPAS2Q99743 824 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 CPNE1Q99829 537 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 PAIP2Q9BPZ3 127 aaKnown RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 WDR77Q9BQA1 342 aaPredicted RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 C17orf62Q9BQA9 187 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 TGIF2Q9GZN2 237 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 ATG10Q9H0Y0 220 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 ATP13A2Q9NQ11 1180 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 ABCF3Q9NUQ8 709 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 INTS7Q9NVH2 962 aaKnown RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 ZFATQ9P243 1243 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 GPN3Q9UHW5 284 aaPredicted RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 ERRFI1Q9UJM3 462 aaPredicted RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 C3orf18Q9UK00 162 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 B3GNT3Q9Y2A9 372 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms