RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SRYQ05066 204 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CA9Q16790 459 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PRRT3Q5FWE3 981 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 YTHDF3Q7Z739 585 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ELMOD2Q8IZ81 293 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TRAM1L1Q8N609 369 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PGAM5Q96HS1 289 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 KCTD15Q96SI1 283 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 MAGEE1Q9HCI5 957 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PRTFDC1Q9NRG1 225 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 SETBP1Q9Y6X0 1596 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 C2orf92A0A1B0GVN3 265 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF850A8MQ14 1090 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 MYCLP1P12525 358 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CCL5P13501 91 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ATP1B2P14415 290 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 APLNRP35414 380 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 DSC3Q14574 896 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 FLYWCH1Q4VC44 716 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 LRRC73Q5JTD7 316 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TMEM69Q5SWH9 247 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CARD17Q5XLA6 110 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 GLT8D1Q68CQ7 371 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF773Q6PK81 442 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 Q8N402 240 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CLEC1AQ8NC01 280 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ASB12Q8WXK4 309 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TNFRSF25Q93038 417 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 COL21A1Q96P44 957 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PELOQ9BRX2 385 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 URM1Q9BTM9 101 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 MECRQ9BV79 373 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 HINT2Q9BX68 163 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TLR6Q9Y2C9 796 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 SNX10Q9Y5X0 201 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 FRMPD1Q5SYB0 1578 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 FAM237AA0A1B0GTK4 181 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 A0A1B0GVT2 93 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TCRBV21S2A2A0A5A6 115 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 VSTM2BA6NLU5 285 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 OR5K4A6NMS3 321 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CSF2P04141 144 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ALDOBP05062 364 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF30P17039 623 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 SYN1P17600 705 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CDK2P24941 298 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 NRLP54845 237 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 RAB4BP61018 213 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ARG2P78540 354 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 NIPAL4Q0D2K0 466 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 AUHQ13825 339 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TRAM1Q15629 374 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CATSPEREQ5SY80 951 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 EMID1Q96A84 441 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 RRNAD1Q96FB5 475 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 LIN37Q96GY3 246 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 MRIQ9BWK5 157 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 MOV10Q9HCE1 1003 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 FAM86C1Q9NVL1 165 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PNPOQ9NVS9 261 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 MALT1Q9UDY8 824 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PDE10AQ9Y233 779 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 HCN4Q9Y3Q4 1203 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 A6NHS1 94 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TMX2-CTNND1H3BSU7 103 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 LILRB5O75023 590 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CNOT4O95628 575 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 SPARCP09486 303 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ANXA8P13928 327 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 MPSTP25325 297 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 L1CAMP32004 1257 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 GRIA1P42261 906 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CLEC6AQ6EIG7 209 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TATDN1Q6P1N9 297 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 KCTD18Q6PI47 426 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 LCLAT1Q6UWP7 414 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PLXDC1Q8IUK5 500 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PGAM4Q8N0Y7 254 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 SMPDL3AQ92484 453 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ANKRD7Q92527 254 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 FOXJ1Q92949 421 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PCED1BQ96HM7 432 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 C7orf50Q9BRJ6 194 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TTYH3Q9C0H2 523 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TAS2R10Q9NYW0 307 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 FXYD6-FXYD2A0A087WZ82 144 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PLSCR5A0PG75 271 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 EFCAB7A8K855 629 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 D6RAR5 112 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 STK17BO94768 372 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 GNB3P16520 340 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 F8A1P23610 371 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 HOXA9P31269 272 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 SLC5A9Q2M3M2 681 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TPRG1LQ5T0D9 272 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TREML2Q5T2D2 321 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CDKAL1Q5VV42 579 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 HMBOX1Q6NT76 420 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 XKRXQ6PP77 449 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 LHFPL3Q86UP9 236 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms