RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 CCDC126Q96EE4 140 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 NSUN5Q96P11 429 aaKnown RBP19.3■□□□□ 0.68
PTCD3-220ENST00000627371 TMEM237Q96Q45 408 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 SLC6A16Q9GZN6 736 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 IQCGQ9H095 443 aaKnown RBP19.3■□□□□ 0.68
PTCD3-220ENST00000627371 RHBGQ9H310 441 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 ACTL8Q9H568 366 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 NOL11Q9H8H0 719 aaKnown RBP19.3■□□□□ 0.68
PTCD3-220ENST00000627371 ACTR8Q9H981 624 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 ZBTB26Q9HCK0 441 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 ZNF304Q9HCX3 659 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 GPN3Q9UHW5 284 aaPredicted RBP19.3■□□□□ 0.68
PTCD3-220ENST00000627371 ZNF490Q9ULM2 529 aaPredicted RBP19.3■□□□□ 0.68
PTCD3-220ENST00000627371 FARSAQ9Y285 508 aaKnown RBP19.3■□□□□ 0.68
PTCD3-220ENST00000627371 SLC22A7Q9Y694 548 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 ZNF891A8MT65 544 aaPredicted RBP19.29■□□□□ 0.68
PTCD3-220ENST00000627371 OR7A17O14581 309 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 CLEC3AO75596 197 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 SERPINA6P08185 405 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 CCNG1P51959 295 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 SNRPNP63162 240 aaKnown RBP19.29■□□□□ 0.68
PTCD3-220ENST00000627371 CXADRP78310 365 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 HYAL2Q12891 473 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 TNFAIP8L3Q5GJ75 292 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 ARHGAP40Q5TG30 622 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 MLIPQ5VWP3 458 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 MRPL14Q6P1L8 145 aaKnown RBP19.29■□□□□ 0.68
PTCD3-220ENST00000627371 MED27Q6P2C8 311 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 C19orf48Q6RUI8 117 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 LAS2Q8IYD9 372 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 OR52B6Q8NGF0 335 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 ZCCHC10Q8TBK6 192 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 L3HYPDHQ96EM0 354 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 NTMT1Q9BV86 223 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 C12orf65Q9H3J6 166 aaKnown RBP19.29■□□□□ 0.68
PTCD3-220ENST00000627371 MID2Q9UJV3 735 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 PADI2Q9Y2J8 665 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 PLLPQ9Y342 182 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 MAU2Q9Y6X3 613 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 CACNA1BQ00975 2339 aa19.29■□□□□ 0.68
PTCD3-220ENST00000627371 A0A0A6YYC8 382 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 URADA6NGE7 173 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 ANKDD1BA6NHY2 528 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 I3L1I5 382 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 PRPF4O43172 522 aaKnown RBP eCLIP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 CREG1O75629 220 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 NSA2O95478 260 aaKnown RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 ALBP02768 609 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 CD63P08962 238 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 ATXN8OSP0DMR3 200 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 IMPDH1P20839 514 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 FBLP22087 321 aaKnown RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 AVPR1BP47901 424 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 RPS18P62269 152 aaKnown RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 MC1RQ01726 317 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 TRAF3Q13114 568 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 DSG2Q14126 1118 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 CASP8Q14790 479 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 COL28A1Q2UY09 1125 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 CRTC2Q53ET0 693 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 UNC50Q53HI1 259 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 ADNP2Q6IQ32 1131 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 RPS27LQ71UM5 84 aaKnown RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 OVCH1Q7RTY7 1134 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 VN1R5Q7Z5H4 357 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 SYVN1Q86TM6 617 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 MYLK4Q86YV6 388 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 AFAP1L2Q8N4X5 818 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 L3MBTL4Q8NA19 623 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 CCDC63Q8NA47 563 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 ATP6V1E2Q96A05 226 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 COL26A1Q96A83 441 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 MMABQ96EY8 250 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 PGM2Q96G03 612 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 CRELD1Q96HD1 420 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 SLC26A1Q9H2B4 701 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 PRORYQ9H606 182 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 ANKHQ9HCJ1 492 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 SEMA4BQ9NPR2 832 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 ARGLU1Q9NWB6 273 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-220ENST00000627371 TCFL5Q9UL49 500 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 NUP210LQ5VU65 1888 aa19.28■□□□□ 0.68
PTCD3-220ENST00000627371 MGAQ8IWI9 3026 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 H0YIG0 161 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 SPAG7O75391 227 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 SUPT7LO94864 414 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 CLDN9O95484 217 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 RECKO95980 971 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 CREB1P16220 341 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 IL1RNP18510 177 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 SERPINB1P30740 379 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 CDH13P55290 713 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 HERC3Q15034 1050 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 ABHD13Q7L211 337 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 PRSS41Q7RTY9 318 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 AMER3Q8N944 861 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 OR7G3Q8NG95 312 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 OR9A4Q8NGU2 314 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 PPP4R1Q8TF05 950 aa19.27■□□□□ 0.68
PTCD3-220ENST00000627371 CCT6BQ92526 530 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms