RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 SIDT1Q9NXL6 827 aaKnown RBP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 SLC39A1Q9NY26 324 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 MARCOQ9UEW3 520 aaPredicted RBP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 ZFP69BQ9UJL9 534 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 CEP250Q9BV73 2442 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 WDFY3Q8IZQ1 3526 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 PMS2P1A4D2B8 440 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 MAGEB17A8MXT2 336 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 POLR1CO15160 346 aaPredicted RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 SRPX2O60687 465 aaPredicted RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 OR2B3O76000 313 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 TGFB1P01137 390 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 FGF4P08620 206 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 VIMP08670 466 aaKnown RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 MSL3P1P0C860 447 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 JMJD7P0C870 316 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 ITIH1P19827 911 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 GSTM2P28161 218 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 PIK3CBP42338 1070 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 ITGA1P56199 1179 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 RPS13P62277 151 aaKnown RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 GNGT1P63211 74 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 MC2RQ01718 297 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 RGS1Q08116 209 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 CSTF3Q12996 717 aaKnown RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 EIF3IQ13347 325 aaKnown RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 COL9A2Q14055 689 aaPredicted RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 PUM1Q14671 1186 aaKnown RBP eCLIP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 ABRAXAS2Q15018 415 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 HKDC1Q2TB90 917 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 TOR1AIP1Q5JTV8 583 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 TCTE1Q5JU00 501 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 WASHC2DQ5SRD0 308 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 DGLUCYQ7Z3D6 616 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 PPP1R3BQ86XI6 285 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 GPR135Q8IZ08 494 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 KIRREL3Q8IZU9 778 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 BMPERQ8N8U9 685 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 TTC29Q8NA56 475 aaPredicted RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 CAMKVQ8NCB2 501 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 OR1L3Q8NH93 324 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 WDR36Q8NI36 951 aaKnown RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 ZCCHC10Q8TBK6 192 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 PIWIL2Q8TC59 973 aaKnown RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 NT5CQ8TCD5 201 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 CREB3L4Q8TEY5 395 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 ZNF473Q8WTR7 871 aaKnown RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 TWIST2Q8WVJ9 160 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 USP7Q93009 1102 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 TM4SF19Q96DZ7 209 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 RNF31Q96EP0 1072 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 SEC16BQ96JE7 1060 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 FAR2Q96K12 515 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 PPP1R36Q96LQ0 422 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 NLNQ9BYT8 704 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 SPRTNQ9H040 489 aaPredicted RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 APMAPQ9HDC9 416 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 DMRT3Q9NQL9 472 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 PISDQ9UG56 409 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 ADGRE2Q9UHX3 823 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 HAO1Q9UJM8 370 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 SERTAD3Q9UJW9 196 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 RARRES3Q9UL19 164 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 SATB2Q9UPW6 733 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 RUVBL1Q9Y265 456 aaKnown RBP8.12□□□□□ -1.11
SGMS1-211ENST00000626236 TSC22D4Q9Y3Q8 395 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 DNAJC15Q9Y5T4 150 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 PTGDR2Q9Y5Y4 395 aa8.12□□□□□ -1.11
SGMS1-211ENST00000626236 A0A1W2PNU3 283 aaPredicted RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 B4E171 279 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 FOXE1O00358 373 aaPredicted RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 SAP18O00422 153 aaKnown RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 TXNDC9O14530 226 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 PLD2O14939 933 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 PIP5K1BO14986 540 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 ZSCAN9O15535 394 aaPredicted RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 EDF1O60869 148 aaKnown RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 CLEC3AO75596 197 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 SCRG1O75711 98 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 ETHE1O95571 254 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 JUNP05412 331 aaKnown RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 LINC00032P0C843 101 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 FGF5P12034 268 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 PTX3P26022 381 aaPredicted RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 HNRNPH1P31943 449 aaKnown RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 ETV5P41161 510 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 TSPAN7P41732 249 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 ID4P47928 161 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 RAP1GDS1P52306 607 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 STXBP1P61764 594 aaKnown RBP8.11□□□□□ -1.11
SGMS1-211ENST00000626236 HMGCS1Q01581 520 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 HYAL2Q12891 473 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 FOXC1Q12948 553 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 PWP1Q13610 501 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 IL11RAQ14626 422 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 GRM7Q14831 915 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 IMPG1Q17R60 797 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 UGT3A2Q3SY77 523 aa8.11□□□□□ -1.11
SGMS1-211ENST00000626236 C10orf62Q5T681 223 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms