RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MRPL1Q9BYD6 325 aaKnown RBP17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 NMUR2Q9GZQ4 415 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 LOC105369274A0A096LPK9 316 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 LOC102723532A0A0G2JNH3 316 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 NPIPB8E9PQR5 432 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 SAP18O00422 153 aaKnown RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 CCDC22O60826 627 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 TBX6O95947 436 aaPredicted RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 GP1BAP07359 652 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 SERPINA6P08185 405 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 ARL4DP49703 201 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 DEFB110Q30KQ9 67 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 RFTN2Q52LD8 501 aaPredicted RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 ZC3H12BQ5HYM0 836 aaKnown RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 KHDRBS2Q5VWX1 349 aaKnown RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 FRMPD2BQ6IN97 320 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 CHSY3Q70JA7 882 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 TMPRSS9Q7Z410 1059 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 PRSS42Q7Z5A4 293 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 SPATA19Q7Z5L4 167 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 OR4N4Q8N0Y3 316 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 F2RL3Q96RI0 385 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 GFM1Q96RP9 751 aaKnown RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 DPYSL5Q9BPU6 564 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 MACROD1Q9BQ69 325 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 PDE7BQ9NP56 450 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 H0YGG7 62 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 CBFA2T3O75081 653 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 ALDOCP09972 364 aaKnown RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 ARF3P61204 181 aaPredicted RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 EMX2Q04743 252 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 ACSM2AQ08AH3 577 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 MAD2L1Q13257 205 aaPredicted RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 CUL3Q13618 768 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 STPG1Q5TH74 334 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 ACSM2BQ68CK6 577 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 ZNF574Q6ZN55 896 aaPredicted RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 DNAJC22Q8N4W6 341 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 OR4D9Q8NGE8 314 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 PHOX2BQ99453 314 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 CDC6Q99741 560 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 CENPKQ9BS16 269 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 SAR1AQ9NR31 198 aa17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 POLR3HQ9Y535 204 aaPredicted RBP17.01■□□□□ 0.31
PTCHD3-202ENST00000622555 EIF2S1P05198 315 aaKnown RBP17■□□□□ 0.31
PTCHD3-202ENST00000622555 SLC35G6P0C7Q6 338 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 HNRNPH1P31943 449 aaKnown RBP17■□□□□ 0.31
PTCHD3-202ENST00000622555 ACADVLP49748 655 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 RAP1GDS1P52306 607 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 VSX2P58304 361 aaPredicted RBP17■□□□□ 0.31
PTCHD3-202ENST00000622555 HSD11B2P80365 405 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 RGS1Q08116 209 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 TBL3Q12788 808 aaKnown RBP17■□□□□ 0.31
PTCHD3-202ENST00000622555 UBAP2LQ14157 1087 aaKnown RBP17■□□□□ 0.31
PTCHD3-202ENST00000622555 CLPPQ16740 277 aaPredicted RBP17■□□□□ 0.31
PTCHD3-202ENST00000622555 SMU1Q2TAY7 513 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 SPIN4Q56A73 249 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 TOR1AIP1Q5JTV8 583 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 DEPDC1Q5TB30 811 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 IL23RQ5VWK5 629 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 MCATQ8IVS2 390 aaKnown RBP17■□□□□ 0.31
PTCHD3-202ENST00000622555 C1orf52Q8N6N3 182 aaKnown RBP17■□□□□ 0.31
PTCHD3-202ENST00000622555 ERP27Q96DN0 273 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 NOP53Q9NZM5 478 aaKnown RBP17■□□□□ 0.31
PTCHD3-202ENST00000622555 SEMA5BQ9P283 1151 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 ARMCX1Q9P291 453 aa17■□□□□ 0.31
PTCHD3-202ENST00000622555 EIF3LQ9Y262 564 aaKnown RBP17■□□□□ 0.31
PTCHD3-202ENST00000622555 LRIT2A6NDA9 550 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 TOX3O15405 576 aaPredicted RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 P2RX6O15547 441 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 HCRTR1O43613 425 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 DIO3P55073 304 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 NCALDP61601 193 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 PWP1Q13610 501 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 SPIDRQ14159 915 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 KIAA0040Q15053 153 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 KMT5CQ86Y97 462 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 CAMKVQ8NCB2 501 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 NT5CQ8TCD5 201 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 CHTF18Q8WVB6 975 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 TM4SF19Q96DZ7 209 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 METTL2AQ96IZ6 378 aaKnown RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 REXO4Q9GZR2 422 aaKnown RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 CHRNA10Q9GZZ6 450 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 MYLK2Q9H1R3 596 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 KLHL31Q9H511 634 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 AIG1Q9NVV5 245 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 AHSPQ9NZD4 102 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 TMED5Q9Y3A6 229 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 COPG1Q9Y678 874 aaKnown RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 RIF1Q5UIP0 2472 aaKnown RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 ADAMTS20P59510 1910 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 IGHV5-10-1A0A0J9YXX1 117 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 D6RAR5 112 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 NTN3O00634 580 aaPredicted RBP16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 MYO1DO94832 1006 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 SEMA3DO95025 777 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 SPTBP11277 2137 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 IDO1P14902 403 aa16.99■□□□□ 0.31
PTCHD3-202ENST00000622555 MAPK1P28482 360 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms