RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 TMEM202A6NGA9 273 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 TTC34A8MYJ7 566 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF197O14709 1029 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ADAMDEC1O15204 470 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZSCAN9O15535 394 aaPredicted RBP9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 PCDHGA12O60330 932 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 GPR37L1O60883 481 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 FKTNO75072 461 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 SERPINB7O75635 380 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 NTRK1P04629 796 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 C8AP07357 584 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ALOX5P09917 674 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 NUDT7P0C024 238 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 CDH3P22223 829 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 NR4A1P22736 598 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 PSMB9P28065 219 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 EPHA2P29317 976 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ETV3P41162 512 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 BDKRB1P46663 353 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 PSMD7P51665 324 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 CTSCP53634 463 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 RPS13P62277 151 aaKnown RBP9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 DEFB103AP81534 67 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 TLE2Q04725 743 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 FCHO2Q0JRZ9 810 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ELP6Q0PNE2 266 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 GAB1Q13480 694 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 CAMK2GQ13555 558 aaPredicted RBP9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ATP1A4Q13733 1029 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 DDX39BQ13838 428 aaKnown RBP9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 CCSMST1Q4G0I0 132 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 BCL7AQ4VC05 210 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 IFI44LQ53G44 452 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF385BQ569K4 471 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF805Q5CZA5 627 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ARSIQ5FYB1 569 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 LRRC73Q5JTD7 316 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 GCNT6Q5T4J0 391 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF648Q5T619 568 aaPredicted RBP9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ADCK1Q86TW2 530 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ENTHD1Q8IYW4 607 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 NAGSQ8N159 534 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 KIAA1958Q8N8K9 716 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZBTB8BQ8NAP8 495 aaPredicted RBP9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 KREMEN2Q8NCW0 462 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 OR4A15Q8NGL6 344 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 RHOXF1Q8NHV9 184 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 HUS1BQ8NHY5 278 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 DNASE1L2Q92874 299 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 MTERF3Q96E29 417 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 TPD52L3Q96J77 140 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 FOPNLQ96NB1 174 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 NEURL2Q9BR09 285 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 EFCAB11Q9BUY7 163 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 SGPP1Q9BX95 441 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 SMG9Q9H0W8 520 aaKnown RBP9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 EHD1Q9H4M9 534 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 TMEM38AQ9H6F2 299 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 MYNNQ9NPC7 610 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ASAH2Q9NR71 780 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 SPHK2Q9NRA0 654 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 ATAD3AQ9NVI7 634 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 NDUFAF4Q9P032 175 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 MARK1Q9P0L2 795 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 OSGIN1Q9UJX0 560 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 LYVE1Q9Y5Y7 322 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 KCNE2Q9Y6J6 123 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 A3GALT2U3KPV4 340 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 MYOFQ9NZM1 2061 aa9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 MTCL1Q9Y4B5 1905 aaKnown RBP9.25□□□□□ -0.93
IGHV3-54-201ENST00000622166 OR2AG2A6NM03 316 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 NEDD8-MDP1E9PL57 170 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 BOLA2-SMG1P6H3BVE0 249 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 PSMD11O00231 422 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TNFRSF11BO00300 401 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 PCDH7O60245 1069 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 EFCAB14O75071 495 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 MOSPD3O75425 235 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 LEFTY1O75610 366 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 RFPL2O75678 378 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 C1orf105O95561 183 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 FADS2O95864 444 aaKnown RBP9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLC16A8O95907 504 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 RB1P06400 928 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 CDK1P06493 297 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 C1GALT1C1LP0DN25 315 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 BMP4P12644 408 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TYRP14679 529 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 POLR2EP19388 210 aaKnown RBP9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 RRM2P31350 389 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 MMP12P39900 470 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 CCR2P41597 374 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 PREPP48147 710 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 HMGA2P52926 109 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 RPS3AP61247 264 aaKnown RBP9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TUBA1BP68363 451 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 EEF1A2Q05639 463 aaKnown RBP9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF763Q0D2J5 394 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 SFSWAPQ12872 951 aaKnown RBP9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TMEM115Q12893 351 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms