RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 LAS2Q8IYD9 372 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 AFAP1L2Q8N4X5 818 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 AMER3Q8N944 861 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 L3MBTL4Q8NA19 623 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 TCP10LQ8TDR4 215 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 SCN2AQ99250 2005 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 NTMT1Q9BV86 223 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 RHBGQ9H310 441 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 KLHL31Q9H511 634 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 GPN2Q9H9Y4 310 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-217ENST00000621474 SEMA4BQ9NPR2 832 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-217ENST00000621474 WDR70Q9NW82 654 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 NDOR1Q9UHB4 597 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 ITPR1Q14643 2758 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 A0A0A6YYC8 382 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-217ENST00000621474 I3L1I5 382 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-217ENST00000621474 K7ENP7 123 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 UGDHO60701 494 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 KLF7O75840 302 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-217ENST00000621474 IL1RNP18510 177 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 HNRNPH1P31943 449 aaKnown RBP13.6□□□□□ -0.23
CBWD3-217ENST00000621474 ETV4P43268 484 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 NCF4Q15080 339 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 LIPJQ5W064 366 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 INO80CQ6PI98 192 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-217ENST00000621474 SLC22A9Q8IVM8 553 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 KRT78Q8N1N4 520 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 ENDOVQ8N8Q3 282 aaKnown RBP13.6□□□□□ -0.23
CBWD3-217ENST00000621474 ARMC2Q8NEN0 867 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 TRPV3Q8NET8 790 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 OR7G3Q8NG95 312 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 ZCCHC10Q8TBK6 192 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 SNRNP27Q8WVK2 155 aaKnown RBP13.6□□□□□ -0.23
CBWD3-217ENST00000621474 MVB12AQ96EY5 273 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 SLC45A3Q96JT2 553 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 FAM111AQ96PZ2 611 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 SMC6Q96SB8 1091 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 NLNQ9BYT8 704 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 DRC3Q9H069 523 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 GSTO2Q9H4Y5 243 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 ACTL8Q9H568 366 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 ACTR8Q9H981 624 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 OXSMQ9NWU1 459 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 SENP1Q9P0U3 644 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 RNF11Q9Y3C5 154 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 ANGPTL3Q9Y5C1 460 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 SLC22A7Q9Y694 548 aa13.6□□□□□ -0.23
CBWD3-217ENST00000621474 H2AFYO75367 372 aaKnown RBP13.59□□□□□ -0.23
CBWD3-217ENST00000621474 B3GALT4O96024 378 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 SERPINA6P08185 405 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 RAB40ALP0C0E4 278 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 SMIM10L1P0DMW3 83 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 MYL2P10916 166 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 AGXTP21549 392 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 PIK3CGP48736 1102 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 CLCQ05315 142 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 LAPTM5Q13571 262 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 ADPRMQ3LIE5 342 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 LETMD1Q6P1Q0 360 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 PRMT9Q6P2P2 845 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 CCDC81Q6ZN84 652 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 RNF175Q8N4F7 328 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 TBC1D19Q8N5T2 526 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 TTLQ8NG68 377 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 OR4F6Q8NGB9 312 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 OR9A4Q8NGU2 314 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 RDH11Q8TC12 318 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 UTP15Q8TED0 518 aaKnown RBP13.59□□□□□ -0.23
CBWD3-217ENST00000621474 ZNF473Q8WTR7 871 aaKnown RBP13.59□□□□□ -0.23
CBWD3-217ENST00000621474 STARD8Q92502 1023 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 SMIM10Q96HG1 83 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 SEC16BQ96JE7 1060 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 SLC26A1Q9H2B4 701 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 CTSFQ9UBX1 484 aa13.59□□□□□ -0.23
CBWD3-217ENST00000621474 SPENQ96T58 3664 aaKnown RBP13.59□□□□□ -0.23
CBWD3-217ENST00000621474 NUP210LQ5VU65 1888 aa13.58□□□□□ -0.23
CBWD3-217ENST00000621474 IGLV3-12A0A075B6K2 115 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 LRIT2A6NDA9 550 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 H0YIV9 168 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 CLEC3AO75596 197 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 SUPT7LO94864 414 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 NSA2O95478 260 aaKnown RBP13.58□□□□□ -0.24
CBWD3-217ENST00000621474 SERPIND1P05546 499 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 FURINP09958 794 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 CPA3P15088 417 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 GSTM2P28161 218 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 PTPN4P29074 926 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 HNF4AP41235 474 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 CCNG1P51959 295 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 TMPRSS3P57727 454 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 DNAJB13P59910 316 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 IL10RAQ13651 578 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 DSG2Q14126 1118 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 CPSF6Q16630 551 aaKnown RBP eCLIP13.58□□□□□ -0.24
CBWD3-217ENST00000621474 SYT16Q17RD7 645 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 GGTA1PQ4G0N0 100 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 PAGE2BQ5JRK9 111 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 MED27Q6P2C8 311 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 C10orf107Q8IVU9 208 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms