RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 RAI2Q9Y5P3 530 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 HAT1O14929 419 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ADAMTS4O75173 837 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 PCDH8O95206 1070 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 CATP04040 527 aaKnown RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ACPPP15309 386 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 PAICSP22234 425 aaKnown RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 DNAJA1P31689 397 aaKnown RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 PIK3CBP42338 1070 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 SUOXP51687 545 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 RAB25P57735 213 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF181Q2M3W8 571 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 XKR6Q5GH73 641 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 XKR4Q5GH76 650 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF697Q5TEC3 545 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 LRRC66Q68CR7 880 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 FAM180BQ6P0A1 224 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 SLC39A5Q6ZMH5 540 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 RFPL4BQ6ZWI9 263 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF280BQ86YH2 543 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 KRT78Q8N1N4 520 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 BEND7Q8N7W2 519 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 TRPV1Q8NER1 839 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 WDR48Q8TAF3 677 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 PHOX2BQ99453 314 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 CRISPLD1Q9H336 500 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 SERHL2Q9H4I8 314 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 CERS4Q9HA82 394 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 SERHLQ9NQF3 203 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 FBXL12Q9NXK8 326 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ARIH1Q9Y4X5 557 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 SAGE2PA6NJ88 616 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 IGSF6O95976 241 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 PDYNP01213 254 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 SERPINA4P29622 427 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 SPIBQ01892 262 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 IL10RBQ08334 325 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 IRF3Q14653 427 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 GANABQ14697 944 aaKnown RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 KIAA0040Q15053 153 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 KDM4DQ6B0I6 523 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 SBSNQ6UWP8 590 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 PAMR1Q6UXH9 720 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 SNX20Q7Z614 316 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 CHPFQ8IZ52 775 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 C2orf73Q8N5S3 287 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 OR6F1Q8NGZ6 308 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 LKAAEAR1Q8TD35 194 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 GGHQ92820 318 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 BBS4Q96RK4 519 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 MTERF1Q99551 399 aaKnown RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 MOV10Q9HCE1 1003 aaKnown RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 IL1RAPQ9NPH3 570 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 NLE1Q9NVX2 485 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 MS4A12Q9NXJ0 267 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 MALT1Q9UDY8 824 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 NYNRINQ9P2P1 1898 aaKnown RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ISPDA4D126 451 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 M0QX08 132 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 TAPBPO15533 448 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 OR10H3O60404 316 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 TBL1XO60907 577 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 C8AP07357 584 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 CHRNB1P11230 501 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 HOXC13P31276 330 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 KDELR2P33947 212 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 HTR3AP46098 478 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF140P52738 457 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 CDH12P55289 794 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ELP6Q0PNE2 266 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 TYSND1Q2T9J0 566 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 PTCHD3Q3KNS1 767 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ATXN7L2Q5T6C5 722 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 AFMIDQ63HM1 303 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 FAM171BQ6P995 826 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF517Q6ZMY9 492 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 EIF3MQ7L2H7 374 aaKnown RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 HJURPQ8NCD3 748 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 APH1BQ8WW43 257 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 APIPQ96GX9 242 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 TMEM248Q9NWD8 314 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 NDRG4Q9ULP0 352 aaKnown RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 SAMD4AQ9UPU9 718 aaKnown RBP6.72□□□□□ -1.33
NEDD9-216ENST00000620854 TLR6Q9Y2C9 796 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 NAALAD2Q9Y3Q0 740 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 C5orf42Q9H799 3197 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 PAPPA2Q9BXP8 1791 aa6.72□□□□□ -1.33
NEDD9-216ENST00000620854 HTTP42858 3142 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 MYO7AQ13402 2215 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 ZSCAN5BA6NJL1 495 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 ANKRD66B4E2M5 251 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 FPGTO14772 594 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 ERAL1O75616 437 aaKnown RBP6.71□□□□□ -1.33
NEDD9-216ENST00000620854 DNAJB5O75953 348 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 GBAP04062 536 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 RETP07949 1114 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 FPR1P21462 350 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 TNFSF8P32971 234 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 SOX3P41225 446 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 GATMP50440 423 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms