RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 POFUT2Q9Y2G5 429 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 PEX16Q9Y5Y5 336 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 GABRR3A8MPY1 467 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 SNPHO15079 494 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 IDSP22304 550 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 CBLP22681 906 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 AGAP6Q5VW22 663 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 RNLSQ5VYX0 342 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 GPR153Q6NV75 609 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 UBE2R2Q712K3 238 aaPredicted RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 UBQLNLQ8IYU4 475 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 APCDD1Q8J025 514 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 AGAP4Q96P64 663 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 TMEM175Q9BSA9 504 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 EBPLQ9BY08 206 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 C3orf14Q9HBI5 128 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 KCND3Q9UK17 655 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 FZD4Q9ULV1 537 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 RNASET2O00584 256 aaKnown RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 ABLIM3O94929 683 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 ETHE1O95571 254 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 POLR2EP19388 210 aaKnown RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 LHCGRP22888 699 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 MAPK8P45983 427 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 AP1S2P56377 157 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 TAF1CQ15572 869 aaPredicted RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 PLEKHS1Q5SXH7 462 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 C10orf62Q5T681 223 aaPredicted RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 VASH1Q7L8A9 365 aaPredicted RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 CYP4Z2PQ8N1L4 340 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 TMEM38AQ9H6F2 299 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.59□□□□□ -0.39
SKP2-209ENST00000620197 V9GYH0 126 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 DOCK6Q96HP0 2047 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 ADAMDEC1O15204 470 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 CAPN5O15484 640 aaPredicted RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 SSX4O60224 188 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 TBL1XO60907 577 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 NBNO60934 754 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 PPIBP23284 216 aaKnown RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 GTF2E2P29084 291 aaKnown RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 XCR1P46094 333 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 HTR3AP46098 478 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 ARPP19P56211 112 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 PCBP3P57721 371 aaKnown RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 ATP13A5Q4VNC0 1218 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 PRSS55Q6UWB4 352 aaPredicted RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 IFNL1Q8IU54 200 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 PAF1Q8N7H5 531 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 CXorf40BQ96DE9 158 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 SCRN2Q96FV2 425 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 ASAH2Q9NR71 780 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 DNAJC11Q9NVH1 559 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 VPS29Q9UBQ0 182 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 ATP6V1HQ9UI12 483 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 RUVBL1Q9Y265 456 aaKnown RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 BACE2Q9Y5Z0 518 aa12.59□□□□□ -0.39
SKP2-209ENST00000620197 NUP214P35658 2090 aaPredicted RBP12.59□□□□□ -0.39
SKP2-209ENST00000620197 SH3D21A4FU49 640 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 A6NL46 340 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 ZAR1LA6NP61 321 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 SUV39H1O43463 412 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 STSP08842 583 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 CTSAP10619 480 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 PDE7AQ13946 482 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 TEAD4Q15561 434 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 ZNF658BQ4V348 819 aaPredicted RBP12.58□□□□□ -0.4
SKP2-209ENST00000620197 GRHL2Q6ISB3 625 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 CCBE1Q6UXH8 406 aaPredicted RBP12.58□□□□□ -0.4
SKP2-209ENST00000620197 LAS2Q8IYD9 372 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 POC5Q8NA72 575 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 SETD6Q8TBK2 473 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 WDFY2Q96P53 400 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 TRNT1Q96Q11 434 aaKnown RBP12.58□□□□□ -0.4
SKP2-209ENST00000620197 CRLS1Q9UJA2 301 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 SLC22A14Q9Y267 594 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 PCDH7O60245 1069 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 GALTP07902 379 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 ANXA8P13928 327 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 RFX2P48378 723 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 GATMP50440 423 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 OLR1P78380 273 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 ELAVL2Q12926 359 aaKnown RBP12.58□□□□□ -0.4
SKP2-209ENST00000620197 CRB2Q5IJ48 1285 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 DGKKQ5KSL6 1271 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 HJURPQ8NCD3 748 aaPredicted RBP12.58□□□□□ -0.4
SKP2-209ENST00000620197 B3GNT7Q8NFL0 401 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 C9orf43Q8TAL5 461 aaPredicted RBP12.58□□□□□ -0.4
SKP2-209ENST00000620197 SH3KBP1Q96B97 665 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 TRPV5Q9NQA5 729 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 ACER3Q9NUN7 267 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 GABRQQ9UN88 632 aa12.58□□□□□ -0.4
SKP2-209ENST00000620197 CAB39Q9Y376 341 aaPredicted RBP12.58□□□□□ -0.4
SKP2-209ENST00000620197 ANKRD34BA5PLL1 514 aa12.57□□□□□ -0.4
SKP2-209ENST00000620197 PLK4O00444 970 aa12.57□□□□□ -0.4
SKP2-209ENST00000620197 NPC1O15118 1278 aa12.57□□□□□ -0.4
SKP2-209ENST00000620197 PSIP1O75475 530 aaKnown RBP12.57□□□□□ -0.4
SKP2-209ENST00000620197 SLCO2B1O94956 709 aa12.57□□□□□ -0.4
SKP2-209ENST00000620197 GKP32189 559 aa12.57□□□□□ -0.4
SKP2-209ENST00000620197 CLK1P49759 484 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms