RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 IL1RL2Q9HB29 575 aa20.71■□□□□ 0.91
SGMS1-210ENST00000619438 SLC23A2Q9UGH3 650 aa20.71■□□□□ 0.91
SGMS1-210ENST00000619438 C9JVG2 144 aa20.7■□□□□ 0.91
SGMS1-210ENST00000619438 CASC3O15234 703 aaKnown RBP20.7■□□□□ 0.91
SGMS1-210ENST00000619438 SLC2A4P14672 509 aa20.7■□□□□ 0.91
SGMS1-210ENST00000619438 GDF5P43026 501 aa20.7■□□□□ 0.91
SGMS1-210ENST00000619438 CYP4F3Q08477 520 aa20.7■□□□□ 0.91
SGMS1-210ENST00000619438 FXNQ16595 210 aa20.7■□□□□ 0.91
SGMS1-210ENST00000619438 TMEM220Q6QAJ8 160 aa20.7■□□□□ 0.91
SGMS1-210ENST00000619438 UBE2R2Q712K3 238 aaPredicted RBP20.7■□□□□ 0.91
SGMS1-210ENST00000619438 MARVELD2Q8N4S9 558 aa20.7■□□□□ 0.91
SGMS1-210ENST00000619438 ZCCHC14Q8WYQ9 949 aaKnown RBP20.7■□□□□ 0.91
SGMS1-210ENST00000619438 CCM2LQ9NUG4 571 aaPredicted RBP20.7■□□□□ 0.91
SGMS1-210ENST00000619438 ARL15Q9NXU5 204 aa20.7■□□□□ 0.91
SGMS1-210ENST00000619438 DSPP15924 2871 aaKnown RBP20.7■□□□□ 0.9
SGMS1-210ENST00000619438 LAMA5O15230 3695 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 CELSR3Q9NYQ7 3312 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 OR2AG2A6NM03 316 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 MANBAO00462 879 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 DNAJA2O60884 412 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 ULK1O75385 1050 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 G6PDP11413 515 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 ATP6V1B2P21281 511 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 AP1S2P56377 157 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 CAPRIN1Q14444 709 aaKnown RBP20.7■□□□□ 0.9
SGMS1-210ENST00000619438 ISXQ2M1V0 245 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 AMZ1Q400G9 498 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 DET1Q7L5Y6 550 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 ZNF547Q8IVP9 402 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 RASGEF1AQ8N9B8 481 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 NRSN2Q9GZP1 204 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 PRDM8Q9NQV8 689 aa20.7■□□□□ 0.9
SGMS1-210ENST00000619438 EIF3LQ9Y262 564 aaKnown RBP20.7■□□□□ 0.9
SGMS1-210ENST00000619438 ARHGEF17Q96PE2 2063 aaPredicted RBP20.69■□□□□ 0.9
SGMS1-210ENST00000619438 CACNA1BQ00975 2339 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 RP1P56715 2156 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 OR5K4A6NMS3 321 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 PDZK1P1A8MUH7 402 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 PPM1DO15297 605 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 SGTAO43765 313 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 CLDN9O95484 217 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 EML2O95834 649 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 FTH1P02794 183 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 F3P13726 295 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 SLC6A12P48065 614 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 OR1D5P58170 312 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 RFTN2Q52LD8 501 aaPredicted RBP20.69■□□□□ 0.9
SGMS1-210ENST00000619438 IYDQ6PHW0 289 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 CYP2R1Q6VVX0 501 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 SPRED1Q7Z699 444 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 KDF1Q8NAX2 398 aaPredicted RBP20.69■□□□□ 0.9
SGMS1-210ENST00000619438 GLB1L3Q8NCI6 653 aaPredicted RBP20.69■□□□□ 0.9
SGMS1-210ENST00000619438 SLC37A2Q8TED4 501 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 NXPE2Q96DL1 559 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 ZNF514Q96K75 400 aaPredicted RBP20.69■□□□□ 0.9
SGMS1-210ENST00000619438 MAGEB10Q96LZ2 347 aaPredicted RBP20.69■□□□□ 0.9
SGMS1-210ENST00000619438 TIMM29Q9BSF4 260 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 RNF11Q9Y3C5 154 aa20.69■□□□□ 0.9
SGMS1-210ENST00000619438 ANKRD11Q6UB99 2663 aaPredicted RBP20.68■□□□□ 0.9
SGMS1-210ENST00000619438 A0A1W2PQM1 296 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 EIF4E1BA6NMX2 242 aaKnown RBP20.68■□□□□ 0.9
SGMS1-210ENST00000619438 NPIPB8E9PQR5 432 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 NTN3O00634 580 aaPredicted RBP20.68■□□□□ 0.9
SGMS1-210ENST00000619438 POP7O75817 140 aaKnown RBP20.68■□□□□ 0.9
SGMS1-210ENST00000619438 KRT6AP02538 564 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 KRT6BP04259 564 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 HIST1H2AGP0C0S8 130 aaPredicted RBP20.68■□□□□ 0.9
SGMS1-210ENST00000619438 EPORP19235 508 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 HIST1H2ADP20671 130 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 IDSP22304 550 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 KRT6CP48668 564 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 GSK3BP49841 420 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 CLCNKAP51800 687 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 HSPA14Q0VDF9 509 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 KIAA0040Q15053 153 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 TIGD2Q4W5G0 525 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 SLC9B2Q86UD5 537 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 AMZ2Q86W34 360 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 ASZ1Q8WWH4 475 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 HIST1H2AHQ96KK5 128 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 SLC38A3Q99624 504 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 HIST1H2AJQ99878 128 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 H2AFJQ9BTM1 129 aa20.68■□□□□ 0.9
SGMS1-210ENST00000619438 GEMIN8Q9NWZ8 242 aaKnown RBP20.68■□□□□ 0.9
SGMS1-210ENST00000619438 SERTM1A2A2V5 107 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 B4GAT1O43505 415 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 SLCO2B1O94956 709 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 UBTFL6P0CB48 400 aaPredicted RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 ZNF26P17031 533 aaPredicted RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 CYP2A7P20853 494 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 VARSP26640 1264 aaKnown RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 RPL10P27635 214 aaKnown RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 HTR1EP28566 365 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 GRIA3P42263 894 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 GPR3P46089 330 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 CTSCP53634 463 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 HHEXQ03014 270 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 PDK3Q15120 406 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 L3MBTL4Q8NA19 623 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 SLC45A3Q96JT2 553 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms