RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 CA5BQ9Y2D0 317 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 ARHGAP10A1A4S6 786 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 RNASET2O00584 256 aaKnown RBP18.25■□□□□ 0.51
PSPC1-206ENST00000619300 APBB3O95704 486 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 TBX6O95947 436 aaPredicted RBP18.25■□□□□ 0.51
PSPC1-206ENST00000619300 MT-ND1P03886 318 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 EFNA1P20827 205 aaPredicted RBP18.25■□□□□ 0.51
PSPC1-206ENST00000619300 CD72P21854 359 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 HNRNPA2B1P22626 353 aaKnown RBP18.25■□□□□ 0.51
PSPC1-206ENST00000619300 RPL3P39023 403 aaKnown RBP18.25■□□□□ 0.51
PSPC1-206ENST00000619300 C2orf80Q0P641 193 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 TMTC4Q5T4D3 741 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 FAM71E1Q6IPT2 247 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 CHRDL2Q6WN34 429 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 EPHX4Q8IUS5 362 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 OR1E3Q8WZA6 343 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 BDH2Q9BUT1 245 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 DCAF13Q9NV06 445 aaKnown RBP18.25■□□□□ 0.51
PSPC1-206ENST00000619300 ATAD3AQ9NVI7 634 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 UBAP1Q9NZ09 502 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 OAZ3Q9UMX2 235 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 FEZF1A0PJY2 475 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 H0Y8X5 98 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 PDLIM1O00151 329 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 CLOCKO15516 846 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 MBTPS2O43462 519 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 KIF1CO43896 1103 aaKnown RBP18.25■□□□□ 0.51
PSPC1-206ENST00000619300 SEMA3DO95025 777 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 C1QCP02747 245 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 FURINP09958 794 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 CHN2P52757 468 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 TAS2R50P59544 299 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 KHDRBS2Q5VWX1 349 aaKnown RBP18.25■□□□□ 0.51
PSPC1-206ENST00000619300 ENPP6Q6UWR7 440 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 SPRED1Q7Z699 444 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 OR52E1Q8NGJ3 308 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 OR2A1Q8NGT9 310 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 FBXO30Q8TB52 745 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 NETO1Q8TDF5 533 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 POP5Q969H6 163 aaKnown RBP18.25■□□□□ 0.51
PSPC1-206ENST00000619300 NCLNQ969V3 563 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 MSANTD3Q96H12 275 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 WDR92Q96MX6 357 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 MS4A8Q9BY19 250 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 PRO3102Q9H379 93 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 C8orf4Q9NR00 106 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 AASDHPPTQ9NRN7 309 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 SCHIP1Q9P0W5 487 aaPredicted RBP18.25■□□□□ 0.51
PSPC1-206ENST00000619300 HEBP2Q9Y5Z4 205 aa18.25■□□□□ 0.51
PSPC1-206ENST00000619300 DPPA5A6NC42 116 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 ACOX3O15254 700 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 HTR1BP28222 390 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 CSNK1G2P78368 415 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 MC1RQ01726 317 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 SMAD4Q13485 552 aaKnown RBP18.24■□□□□ 0.51
PSPC1-206ENST00000619300 PDE7AQ13946 482 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 ZNF385BQ569K4 471 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 TMEM31Q5JXX7 168 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 ZCCHC8Q6NZY4 707 aaKnown RBP18.24■□□□□ 0.51
PSPC1-206ENST00000619300 FAM86B1Q8N7N1 296 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 CNBD2Q96M20 576 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 TPT1P8Q9HAU6 139 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 SPASTQ9UBP0 616 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 GMEB1Q9Y692 573 aa18.24■□□□□ 0.51
PSPC1-206ENST00000619300 PRAMEF33A0A0G2JMD5 474 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 RNF103-CHMP3A0A140T963 221 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 PRKD3O94806 890 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 KCNK5O95279 499 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 CYP4F2P78329 520 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 GPR155Q7Z3F1 870 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 MFSD2AQ8NA29 543 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 HMGB4Q8WW32 186 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 PPCDCQ96CD2 204 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 MTERF3Q96E29 417 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 PDXPQ96GD0 296 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 F2RL3Q96RI0 385 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 SORBS1Q9BX66 1292 aaKnown RBP18.23■□□□□ 0.51
PSPC1-206ENST00000619300 TBC1D29Q9UFV1 150 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 EBF1Q9UH73 591 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 ICKQ9UPZ9 632 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 COLEC10Q9Y6Z7 277 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 IGKV1-8A0A0C4DH67 115 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 C1orf226A1L170 272 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 PLPP1O14494 284 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 OR1F1O43749 312 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 RASAL1O95294 804 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 IL1RNP18510 177 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 TPP2P29144 1249 aaPredicted RBP18.23■□□□□ 0.51
PSPC1-206ENST00000619300 TFF2Q03403 129 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 NHSL2Q5HYW2 709 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 TPRG1LQ5T0D9 272 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 CCNYL2Q5T2Q4 361 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 CPZQ66K79 652 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 ABRAXAS1Q6UWZ7 409 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 IKBIPQ70UQ0 350 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 RD3Q7Z3Z2 195 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 TSACCQ96A04 125 aaPredicted RBP18.23■□□□□ 0.51
PSPC1-206ENST00000619300 PHF7Q9BWX1 381 aaPredicted RBP18.23■□□□□ 0.51
PSPC1-206ENST00000619300 OLAHQ9NV23 265 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 PDP2Q9P2J9 529 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms