RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RPN2P04844 631 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 PTPN6P29350 595 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 ALDH9A1P49189 494 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 C2orf80Q0P641 193 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 CYP2A13Q16696 494 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 COQ5Q5HYK3 327 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 PAGE2BQ5JRK9 111 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 ZNF438Q7Z4V0 828 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 DEFB123Q8N688 67 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 TMEM102Q8N9M5 508 aaPredicted RBP7.46□□□□□ -1.21
NEK3-207ENST00000617054 GLB1L3Q8NCI6 653 aaPredicted RBP7.46□□□□□ -1.21
NEK3-207ENST00000617054 OR5AK3PQ8NH89 298 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 FBXO30Q8TB52 745 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 SETD7Q8WTS6 366 aaKnown RBP7.46□□□□□ -1.21
NEK3-207ENST00000617054 LCN9Q8WX39 176 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 SLC6A18Q96N87 628 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 SLC29A1Q99808 456 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 DPH7Q9BTV6 452 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 KLHL4Q9C0H6 718 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 BRF2Q9HAW0 419 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 TMED5Q9Y3A6 229 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 DHRS12A0PJE2 317 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 SAC3D1A6NKF1 404 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 BTN3A3O00478 584 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 SCN2BO60939 215 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 MYO1DO94832 1006 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 IL3P08700 152 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 THEGLP0DJG4 465 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 PRPS1L1P21108 318 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 PRPH2P23942 346 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 TIA1P31483 386 aaKnown RBP eCLIP7.46□□□□□ -1.22
NEK3-207ENST00000617054 AKT2P31751 481 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 CCR8P51685 355 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 CSNK1G2P78368 415 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 DMPKQ09013 629 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 TRAP1Q12931 704 aaKnown RBP7.46□□□□□ -1.22
NEK3-207ENST00000617054 GK3PQ14409 553 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 PLCL1Q15111 1095 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 RUNDC3AQ59EK9 446 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 CPTPQ5TA50 214 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 PRMT9Q6P2P2 845 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 ENPP6Q6UWR7 440 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 RNF165Q6ZSG1 346 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 TRIM69Q86WT6 500 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 TMEM132CQ8N3T6 1108 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 OR2T12Q8NG77 320 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 MAL2Q969L2 176 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 RNF145Q96MT1 663 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 C17orf62Q9BQA9 187 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 DUSP26Q9BV47 211 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 FBRSQ9HAH7 460 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 WSB2Q9NYS7 404 aaPredicted RBP7.46□□□□□ -1.22
NEK3-207ENST00000617054 ACTR3BQ9P1U1 418 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 USP36Q9P275 1121 aaKnown RBP7.46□□□□□ -1.22
NEK3-207ENST00000617054 ACSL6Q9UKU0 697 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 SNX11Q9Y5W9 270 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 SPAG17Q6Q759 2223 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 PRR19A6NJB7 356 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 C4orf51C9J302 202 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 HAT1O14929 419 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 STAMBPO95630 424 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 C8BP07358 591 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 UBTFL6P0CB48 400 aaPredicted RBP7.46□□□□□ -1.22
NEK3-207ENST00000617054 ERGP11308 486 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 ENGP17813 658 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 POLR2CP19387 275 aaPredicted RBP7.46□□□□□ -1.22
NEK3-207ENST00000617054 GCKP35557 465 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 GTF2A1P52655 376 aaPredicted RBP7.46□□□□□ -1.22
NEK3-207ENST00000617054 PPP1CAP62136 330 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 PRDX1Q06830 199 aaKnown RBP7.46□□□□□ -1.22
NEK3-207ENST00000617054 FOXD4Q12950 439 aaPredicted RBP7.46□□□□□ -1.22
NEK3-207ENST00000617054 LRRC32Q14392 662 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 MPEG1Q2M385 716 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 CCNYL2Q5T2Q4 361 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 KLHDC8AQ8IYD2 350 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 ADGRF3Q8IZF5 1079 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 NETO1Q8TDF5 533 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 PMM1Q92871 262 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 EME1Q96AY2 570 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 GBP5Q96PP8 586 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 HAUS8Q9BT25 410 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 AICDAQ9GZX7 198 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 SLC6A20Q9NP91 592 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 MRPS30Q9NP92 439 aaKnown RBP7.46□□□□□ -1.22
NEK3-207ENST00000617054 ASIC5Q9NY37 505 aa7.46□□□□□ -1.22
NEK3-207ENST00000617054 GPR89AB7ZAQ6 455 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 SCAMP2O15127 329 aaKnown RBP7.45□□□□□ -1.22
NEK3-207ENST00000617054 GSTA4O15217 222 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 FBXO24O75426 580 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 C9P02748 559 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 GPR89BP0CG08 455 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 GLULP15104 373 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 ATP6V1C1P21283 382 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 TPP2P29144 1249 aaPredicted RBP7.45□□□□□ -1.22
NEK3-207ENST00000617054 AQP1P29972 269 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 BCL6P41182 706 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 RAB8AP61006 207 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 LAPTM5Q13571 262 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 E2F2Q14209 437 aa7.45□□□□□ -1.22
NEK3-207ENST00000617054 SMU1Q2TAY7 513 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms