RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ICAM2P13598 275 aa17.93■□□□□ 0.46
CDX1-202ENST00000616154 AVPR1BP47901 424 aa17.93■□□□□ 0.46
CDX1-202ENST00000616154 NDUFA9Q16795 377 aa17.93■□□□□ 0.46
CDX1-202ENST00000616154 FJX1Q86VR8 437 aa17.93■□□□□ 0.46
CDX1-202ENST00000616154 ZC3HC1Q86WB0 502 aaKnown RBP17.93■□□□□ 0.46
CDX1-202ENST00000616154 MYO1HQ8N1T3 1032 aa17.93■□□□□ 0.46
CDX1-202ENST00000616154 IMMP1LQ96LU5 166 aa17.93■□□□□ 0.46
CDX1-202ENST00000616154 OLFM1Q99784 485 aa17.93■□□□□ 0.46
CDX1-202ENST00000616154 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.93■□□□□ 0.46
CDX1-202ENST00000616154 PPANQ9NQ55 473 aaKnown RBP17.93■□□□□ 0.46
CDX1-202ENST00000616154 ZFATQ9P243 1243 aa17.93■□□□□ 0.46
CDX1-202ENST00000616154 MTRF1LQ9UGC7 380 aaKnown RBP17.93■□□□□ 0.46
CDX1-202ENST00000616154 PSAT1Q9Y617 370 aa17.93■□□□□ 0.46
CDX1-202ENST00000616154 H0YIG0 161 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 WDPCPO95876 746 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 CYC1P08574 325 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 C8orf89P0DMQ9 161 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 HRH2P25021 359 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 KCNK10P57789 538 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 IL2P60568 153 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 MAT1AQ00266 395 aaKnown RBP17.92■□□□□ 0.46
CDX1-202ENST00000616154 THEMIS2Q5TEJ8 643 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 PLD3Q8IV08 490 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 ANKMY2Q8IV38 441 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 ANKRD7Q92527 254 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 LINGO1Q96FE5 620 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 SGPP1Q9BX95 441 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 TXLNGYQ9BZA5 131 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 PCBD2Q9H0N5 130 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 CCDC177Q9NQR7 707 aaPredicted RBP17.92■□□□□ 0.46
CDX1-202ENST00000616154 ABCF3Q9NUQ8 709 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 NSMCE4AQ9NXX6 385 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 ABI3Q9P2A4 366 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 SCN3AQ9NY46 2000 aa17.92■□□□□ 0.46
CDX1-202ENST00000616154 APCP25054 2843 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 H7BY64 318 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 HNRNPRO43390 633 aaKnown RBP17.91■□□□□ 0.46
CDX1-202ENST00000616154 NSA2O95478 260 aaKnown RBP17.91■□□□□ 0.46
CDX1-202ENST00000616154 F10P00742 488 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 ZNF37AP17032 561 aaPredicted RBP17.91■□□□□ 0.46
CDX1-202ENST00000616154 AP1S2P56377 157 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 TBPL1P62380 186 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 SNRPNP63162 240 aaKnown RBP17.91■□□□□ 0.46
CDX1-202ENST00000616154 PDAP1Q13442 181 aaKnown RBP17.91■□□□□ 0.46
CDX1-202ENST00000616154 PHKG1Q16816 387 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 ABHD17BQ5VST6 288 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 GFRALQ6UXV0 394 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 CEP128Q6ZU80 1094 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 VN1R4Q7Z5H5 301 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 ZBED8Q8IZ13 594 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 GPATCH11Q8N954 259 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 OR9A4Q8NGU2 314 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 DNAJB8Q8NHS0 232 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 AENQ8WTP8 325 aaKnown RBP17.91■□□□□ 0.46
CDX1-202ENST00000616154 METTL21AQ8WXB1 218 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 MARVELD3Q96A59 401 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 PRAP1Q96NZ9 151 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 VN1R1Q9GZP7 353 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 TMEM184CQ9NVA4 438 aa17.91■□□□□ 0.46
CDX1-202ENST00000616154 KCNE1BA0A087WTH5 132 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 OR5H15A6NDH6 313 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 CRYABP02511 175 aaKnown RBP17.9■□□□□ 0.46
CDX1-202ENST00000616154 C1QAP02745 245 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 ENO2P09104 434 aaPredicted RBP17.9■□□□□ 0.46
CDX1-202ENST00000616154 FAM153BP0C7A2 387 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 CCND1P24385 295 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 RPS15AP62244 130 aaKnown RBP17.9■□□□□ 0.46
CDX1-202ENST00000616154 ZXDCQ2QGD7 858 aaPredicted RBP17.9■□□□□ 0.46
CDX1-202ENST00000616154 FAM153CQ494X1 144 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 AGTRAPQ6RW13 159 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 PALM2Q8IXS6 379 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 SUN3Q8TAQ9 357 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 RHOJQ9H4E5 214 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 TEKT2Q9UIF3 430 aa17.9■□□□□ 0.46
CDX1-202ENST00000616154 PRSS44E7EML9 344 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 PRAMEF2O60811 474 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 RASAL1O95294 804 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 WISP3O95389 354 aaPredicted RBP17.89■□□□□ 0.45
CDX1-202ENST00000616154 STATHP02808 62 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 ZNF33BQ06732 778 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 PPP1R3AQ16821 1122 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 SBSNQ6UWP8 590 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 TMEM207Q6UWW9 146 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 CPEB2Q7Z5Q1 589 aaKnown RBP17.89■□□□□ 0.45
CDX1-202ENST00000616154 STRA8Q7Z7C7 330 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 GSPT2Q8IYD1 628 aaKnown RBP17.89■□□□□ 0.45
CDX1-202ENST00000616154 AMER2Q8N7J2 671 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 OR56A3Q8NH54 315 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 PYROXD1Q8WU10 500 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 THAP11Q96EK4 314 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 POPDC3Q9HBV1 291 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 SMYD2Q9NRG4 433 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 COPG2Q9UBF2 871 aa17.89■□□□□ 0.45
CDX1-202ENST00000616154 C19orf25Q9UFG5 118 aaPredicted RBP17.89■□□□□ 0.45
CDX1-202ENST00000616154 PCNX1Q96RV3 2341 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 ARHGAP10A1A4S6 786 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 CCDC151A5D8V7 595 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 SEC24DO94855 1032 aaPredicted RBP17.88■□□□□ 0.45
CDX1-202ENST00000616154 GSTA2P09210 222 aa17.88■□□□□ 0.45
CDX1-202ENST00000616154 MST1P26927 711 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms