RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 LIMS2Q7Z4I7 341 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 DENND1CQ8IV53 801 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 KLHDC8BQ8IXV7 354 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 YIPF7Q8N8F6 280 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 TOR1AIP2Q8NFQ8 470 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 GPR150Q8NGU9 434 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 PDLIM5Q96HC4 596 aaKnown RBP12.71□□□□□ -0.37
MSH6-214ENST00000616033 LINC00597Q9H2U6 94 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 POPDC3Q9HBV1 291 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 MCCC2Q9HCC0 563 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 CRLS1Q9UJA2 301 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 RPS6KA6Q9UK32 745 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 ACSL6Q9UKU0 697 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 A0A0X1KG70 313 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 FABP12A6NFH5 140 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 ANKRD66B4E2M5 251 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 F5H5T6 163 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 SCO2O43819 266 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 CD52P31358 61 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 NRIP1P48552 1158 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 PSEN2P49810 448 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 SNTA1Q13424 505 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 HMGN2P46Q86SG4 172 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 ZSWIM9Q86XI8 627 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 CELF5Q8N6W0 485 aaKnown RBP12.71□□□□□ -0.38
MSH6-214ENST00000616033 ZFP41Q8N8Y5 198 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 OR4K1Q8NGD4 311 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 OR8H1Q8NGG4 311 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 TMCO6Q96DC7 493 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 C8orf48Q96LL4 319 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 COL21A1Q96P44 957 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 SNX18Q96RF0 628 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 C11orf54Q9H0W9 315 aaPredicted RBP12.71□□□□□ -0.38
MSH6-214ENST00000616033 KCNH6Q9H252 994 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 ZNF224Q9NZL3 707 aa12.71□□□□□ -0.38
MSH6-214ENST00000616033 XIRP2A4UGR9 3374 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 ZNF236Q9UL36 1845 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 CIB4A0PJX0 185 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 KCNK5O95279 499 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 ETV3P41162 512 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 CXCR4P61073 352 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 PPIGQ13427 754 aaKnown RBP eCLIP12.7□□□□□ -0.38
MSH6-214ENST00000616033 CDH18Q13634 790 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 TAF1AQ15573 450 aaPredicted RBP12.7□□□□□ -0.38
MSH6-214ENST00000616033 GPAT3Q53EU6 434 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 ZC3H12BQ5HYM0 836 aaKnown RBP12.7□□□□□ -0.38
MSH6-214ENST00000616033 TMIGD1Q6UXZ0 262 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 DPY19L3Q6ZPD9 716 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 GLRX5Q86SX6 157 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 LMNTD1Q8N9Z9 388 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 BCL7BQ9BQE9 202 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 SLC22A14Q9Y267 594 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 TLR6Q9Y2C9 796 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 FCF1Q9Y324 198 aaKnown RBP12.7□□□□□ -0.38
MSH6-214ENST00000616033 C17orf102A2RUQ5 167 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 PCDH17O14917 1159 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 MTX2O75431 263 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 LAMP1P11279 417 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 HOXC13P31276 330 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 PTPN5P54829 565 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 HNRNPA0Q13151 305 aaKnown RBP12.7□□□□□ -0.38
MSH6-214ENST00000616033 VEPH1Q14D04 833 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 TUBA3EQ6PEY2 450 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 MEX3DQ86XN8 651 aaKnown RBP12.7□□□□□ -0.38
MSH6-214ENST00000616033 C2orf69Q8N8R5 385 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 DEDD2Q8WXF8 326 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 TINF2Q9BSI4 451 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 MAGIXQ9H6Y5 334 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 TPT1P8Q9HAU6 139 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 NLKQ9UBE8 527 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 KCNN3Q9UGI6 736 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 CFL2Q9Y281 166 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 MAN2B2Q9Y2E5 1009 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 YARS2Q9Y2Z4 477 aaKnown RBP12.7□□□□□ -0.38
MSH6-214ENST00000616033 PAPPA2Q9BXP8 1791 aa12.7□□□□□ -0.38
MSH6-214ENST00000616033 TSC2P49815 1807 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 A0A1B0GVC2 190 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 A6NIN4 97 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 FAM25AB3EWG3 89 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 FAM25CB3EWG5 89 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 FAM25GB3EWG6 89 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 TEX46H3BTG2 121 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 SAP18O00422 153 aaKnown RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 PLOD3O60568 738 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 PRAMEF11O60813 436 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 NOS1APO75052 506 aaPredicted RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 CLDN9O95484 217 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 RPIAP49247 311 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 CLCN7P51798 805 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 CRYBB1P53674 252 aaPredicted RBP12.69□□□□□ -0.38
MSH6-214ENST00000616033 FCHO2Q0JRZ9 810 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 GPR50Q13585 617 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 AFMIDQ63HM1 303 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 ADNP2Q6IQ32 1131 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 MON1AQ86VX9 555 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 BBS7Q8IWZ6 715 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 KIAA1958Q8N8K9 716 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 DHRS9Q9BPW9 319 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 CD244Q9BZW8 370 aa12.69□□□□□ -0.38
MSH6-214ENST00000616033 MKRN2Q9H000 416 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms