RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 SCAMP2O15127 329 aaKnown RBP13.54□□□□□ -0.24
SSBP2-220ENST00000615665 TAPBPO15533 448 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 MPZL2O60487 215 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 WBP4O75554 376 aaKnown RBP13.54□□□□□ -0.24
SSBP2-220ENST00000615665 VEGFBP49765 207 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 NHSL2Q5HYW2 709 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 RFLNAQ6ZTI6 216 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 SPRED1Q7Z699 444 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 FAM124AQ86V42 546 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 POC5Q8NA72 575 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 UBTD2Q8WUN7 234 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 SLC35G5Q96KT7 338 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 CRNNQ9UBG3 495 aaPredicted RBP13.54□□□□□ -0.24
SSBP2-220ENST00000615665 MAGED1Q9Y5V3 778 aaPredicted RBP13.54□□□□□ -0.24
SSBP2-220ENST00000615665 WDR81Q562E7 1941 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 A0A1B0GTL3 188 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 AP3D1O14617 1153 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 UGDHO60701 494 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 C1SP09871 688 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 SMIM18P0DKX4 95 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 AMD1P17707 334 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 HTR1BP28222 390 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 FAM219BQ5XKK7 198 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 GRHL2Q6ISB3 625 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 VTCN1Q7Z7D3 282 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 RNF130Q86XS8 419 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 HS3ST5Q8IZT8 346 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 HDDC3Q8N4P3 179 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 ST13P5Q8NFI4 369 aaPredicted RBP13.54□□□□□ -0.24
SSBP2-220ENST00000615665 RAD9AQ99638 391 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 ARHGEF33A8MVX0 844 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 H3BNC9 293 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 KLK8O60259 260 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 EIF2S1P05198 315 aaKnown RBP13.54□□□□□ -0.24
SSBP2-220ENST00000615665 HNRNPA1P09651 372 aaKnown RBP eCLIP13.54□□□□□ -0.24
SSBP2-220ENST00000615665 CCNYL3P0C7X3 344 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 PAICSP22234 425 aaKnown RBP13.54□□□□□ -0.24
SSBP2-220ENST00000615665 TAS2R41P59536 307 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 ZNF33BQ06732 778 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 EIF4EBP2Q13542 120 aaPredicted RBP13.54□□□□□ -0.24
SSBP2-220ENST00000615665 SYT16Q17RD7 645 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 TEX47Q8TBZ9 253 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 UBASH3BQ8TF42 649 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 SLCO4A1Q96BD0 722 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 ZNF583Q96ND8 569 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 PKP4Q99569 1192 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 ITM2BQ9Y287 266 aa13.54□□□□□ -0.24
SSBP2-220ENST00000615665 ASNA1O43681 348 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 CEACAM20Q6UY09 585 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 NRSN1Q8IZ57 195 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 NATD1Q8N6N6 113 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 TCEAL4Q96EI5 215 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 EGLN2Q96KS0 407 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 CHCHD6Q9BRQ6 235 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 C11orf16Q9NQ32 467 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 OLAHQ9NV23 265 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 FBXW2Q9UKT8 454 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 SIP14410 1827 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 TTC3P53804 2025 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 EFCAB9A8MZ26 197 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 MOGQ16653 247 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 ZNF829Q3KNS6 432 aaPredicted RBP13.53□□□□□ -0.24
SSBP2-220ENST00000615665 NEK10Q6ZWH5 1172 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 ARMCX6Q7L4S7 300 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 FRS2Q8WU20 508 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 HPS1Q92902 700 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 RGMAQ96B86 450 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 DOHHQ9BU89 302 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 SPATA9Q9BWV2 254 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 NPLQ9BXD5 320 aaPredicted RBP13.53□□□□□ -0.24
SSBP2-220ENST00000615665 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 ZCCHC3Q9NUD5 404 aaKnown RBP13.53□□□□□ -0.24
SSBP2-220ENST00000615665 WDR90Q96KV7 1748 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 J3QRK9 145 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 FXYD1O00168 92 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 SCAMP1O15126 338 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 CLPXO76031 633 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 BCHEP06276 602 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 FSHRP23945 695 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 CD47Q08722 323 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 FOXB2Q5VYV0 432 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 EGFL6Q8IUX8 553 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 ZNF548Q8NEK5 533 aaPredicted RBP13.53□□□□□ -0.24
SSBP2-220ENST00000615665 EP400Q96L91 3159 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 SLC1A7O00341 560 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 OR1E2P47887 323 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 GPM6BQ13491 265 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 IRAK1BP1Q5VVH5 260 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 ERN2Q76MJ5 926 aaKnown RBP13.53□□□□□ -0.24
SSBP2-220ENST00000615665 TRIM46Q7Z4K8 759 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 OR7G3Q8NG95 312 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 MYLIPQ8WY64 445 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 DUS3LQ96G46 650 aaKnown RBP13.53□□□□□ -0.24
SSBP2-220ENST00000615665 COL21A1Q96P44 957 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 IL23AQ9NPF7 189 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 TAS2R9Q9NYW1 312 aa13.53□□□□□ -0.24
SSBP2-220ENST00000615665 URADA6NGE7 173 aa13.52□□□□□ -0.24
SSBP2-220ENST00000615665 TSPAN12O95859 305 aa13.52□□□□□ -0.24
SSBP2-220ENST00000615665 TIMP1P01033 207 aa13.52□□□□□ -0.24
SSBP2-220ENST00000615665 CMPK1P30085 196 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms