RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 FAM180AQ6UWF9 173 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 LANCL3Q6ZV70 420 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 FRA10AC1Q70Z53 315 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 THOC6Q86W42 341 aaKnown RBP21.46■■□□□ 1.03
FAM228B-208ENST00000613899 AFAP1L2Q8N4X5 818 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 ZNF740Q8NDX6 193 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 GRHL3Q8TE85 626 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 CDKL2Q92772 493 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 HAS2Q92819 552 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 TSNARE1Q96NA8 513 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 EGFL8Q99944 293 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 AIF1LQ9BQI0 150 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 ERP44Q9BS26 406 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 RNF32Q9H0A6 362 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 PELI2Q9HAT8 420 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 GPAMQ9HCL2 828 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 TEKT2Q9UIF3 430 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 ZFP69BQ9UJL9 534 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 OARD1Q9Y530 152 aa21.46■■□□□ 1.03
FAM228B-208ENST00000613899 TRAV17A0A0B4J275 112 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 EIF3HO15372 352 aaKnown RBP eCLIP21.45■■□□□ 1.02
FAM228B-208ENST00000613899 SEC24DO94855 1032 aaPredicted RBP21.45■■□□□ 1.02
FAM228B-208ENST00000613899 SCTRP47872 440 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 TNFSF10P50591 281 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 REEP5Q00765 189 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 ABHD17BQ5VST6 288 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 PLAG1Q6DJT9 500 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 CAPN12Q6ZSI9 719 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 ABHD13Q7L211 337 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 TMPRSS11BQ86T26 416 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 CATSPER1Q8NEC5 780 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 SPATA4Q8NEY3 305 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 OR1N1Q8NGS0 311 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 NT5CQ8TCD5 201 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 FAR1Q8WVX9 515 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 DPH5Q9H2P9 285 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 TXNDC16Q9P2K2 825 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 CTNNAL1Q9UBT7 734 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 KCNE2Q9Y6J6 123 aa21.45■■□□□ 1.02
FAM228B-208ENST00000613899 URADA6NGE7 173 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 ZNF860A6NHJ4 632 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 GALR3O60755 368 aaPredicted RBP21.44■■□□□ 1.02
FAM228B-208ENST00000613899 SERPIND1P05546 499 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 EDN3P14138 238 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 ALOX12P18054 663 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 MRPS25P82663 173 aaKnown RBP21.44■■□□□ 1.02
FAM228B-208ENST00000613899 POU4F1Q01851 419 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 BTBD16Q32M84 506 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 ANKRD37Q7Z713 158 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 BCORP1Q8N888 145 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 MOCOSQ96EN8 888 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 TSPAN17Q96FV3 270 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 PEX11GQ96HA9 241 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 MCMBPQ9BTE3 642 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 SPNS1Q9H2V7 528 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 SAYSD1Q9NPB0 183 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 PLEKHB1Q9UF11 243 aaPredicted RBP21.44■■□□□ 1.02
FAM228B-208ENST00000613899 SLC22A14Q9Y267 594 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 SLC5A6Q9Y289 635 aa21.44■■□□□ 1.02
FAM228B-208ENST00000613899 POLEQ07864 2286 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 IGHV3-20A0A0C4DH32 117 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 E2F3O00716 465 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 RAD51CO43502 376 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 JAK1P23458 1154 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 TSNQ15631 228 aaKnown RBP21.43■■□□□ 1.02
FAM228B-208ENST00000613899 DEFB134Q4QY38 66 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 NXPE4Q6UWF7 544 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 CEP97Q8IW35 865 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 TRPV3Q8NET8 790 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 ANKRD49Q8WVL7 239 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 C5orf34Q96MH7 638 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 RBCK1Q9BYM8 510 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 DERL2Q9GZP9 239 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.43■■□□□ 1.02
FAM228B-208ENST00000613899 SMYD2Q9NRG4 433 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 PLA2G3Q9NZ20 509 aa21.43■■□□□ 1.02
FAM228B-208ENST00000613899 ERRFI1Q9UJM3 462 aaPredicted RBP21.43■■□□□ 1.02
FAM228B-208ENST00000613899 CDC123O75794 336 aaPredicted RBP21.42■■□□□ 1.02
FAM228B-208ENST00000613899 SVILO95425 2214 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 FHP07954 510 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 ZNF888P0CJ79 500 aaPredicted RBP21.42■■□□□ 1.02
FAM228B-208ENST00000613899 RNF224P0DH78 156 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 SSTR1P30872 391 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 ZNF33BQ06732 778 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 C2orf54Q08AI8 447 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 ABRAXAS2Q15018 415 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 EXT1Q16394 746 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 DOPEY1Q5JWR5 2465 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 SHISA5Q8N114 240 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 PLPP5Q8NEB5 264 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 OR5T3Q8NGG3 340 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 SUN3Q8TAQ9 357 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 TBC1D20Q96BZ9 403 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 MAGEB10Q96LZ2 347 aaPredicted RBP21.42■■□□□ 1.02
FAM228B-208ENST00000613899 CPNE1Q99829 537 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 PHACTR1Q9C0D0 580 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 LANCL2Q9NS86 450 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 OLAHQ9NV23 265 aa21.42■■□□□ 1.02
FAM228B-208ENST00000613899 UTP20O75691 2785 aaKnown RBP21.42■■□□□ 1.02
FAM228B-208ENST00000613899 MAGEB17A8MXT2 336 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms